PDB形式変換不可の PDB エントリー

8D4D	gamma-Arf1 mediated dimeric assembly of AP-1, Arf1, Nef complex within lattice on MHC-I lipopeptide incorporated narrow membrane tubes 分子名称: ADP-ribosylation factor 1, AP-1 complex subunit beta-1, AP-1 complex subunit gamma-1, ... 著者 Hooy, R.M, Hurley, J.H. 登録日 2022-06-01 公開日 2023-06-14 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (9.6 Å) 主引用文献 Self-assembly and structure of a clathrin-independent AP-1:Arf1 tubular membrane coat. Sci Adv, 8, 2022
8D4E	Asymmetric unit of AP-1, Arf1, Nef lattice on MHC-I lipopeptide incorporated wide(r) membrane tubes 分子名称: ADP-ribosylation factor 1, AP-1 complex subunit beta-1, AP-1 complex subunit gamma-1, ... 著者 Hooy, R.M, Hurley, J.H. 登録日 2022-06-01 公開日 2023-06-14 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (9.2 Å) 主引用文献 Self-assembly and structure of a clathrin-independent AP-1:Arf1 tubular membrane coat. Sci Adv, 8, 2022
8D4F	beta-Arf1 mediated dimeric assembly of AP-1, Arf1, Nef complex within lattice on MHC-I lipopeptide incorporated wide(r) membrane tubes 分子名称: ADP-ribosylation factor 1, AP-1 complex subunit beta-1, AP-1 complex subunit gamma-1, ... 著者 Hooy, R.M, Hurley, J.H. 登録日 2022-06-01 公開日 2023-06-14 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (9.8 Å) 主引用文献 Self-assembly and structure of a clathrin-independent AP-1:Arf1 tubular membrane coat. Sci Adv, 8, 2022
8D4G	gamma-Arf1 mediated dimeric assembly of AP-1, Arf1, Nef complex within lattice on MHC-I lipopeptide incorporated wide(r) membrane tubes 分子名称: ADP-ribosylation factor 1, AP-1 complex subunit beta-1, AP-1 complex subunit gamma-1, ... 著者 Hooy, R.M, Hurley, J.H. 登録日 2022-06-01 公開日 2023-06-14 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (11.6 Å) 主引用文献 Self-assembly and structure of a clathrin-independent AP-1:Arf1 tubular membrane coat. Sci Adv, 8, 2022
8D5A	Middle state of SARS-CoV-2 BA.2 variant spike protein 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Zhang, J, Tang, W.C, Gao, H.L, Shi, W, Peng, H.Q, Volloch, S.R, Xiao, T.S, Chen, B. 登録日 2022-06-04 公開日 2023-06-07 最終更新日 2023-07-26 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structural and functional characteristics of the SARS-CoV-2 Omicron subvariant BA.2 spike protein. Nat.Struct.Mol.Biol., 30, 2023
8D6X	Structure of the Mycobacterium tuberculosis 20S proteasome bound to the ATP-bound Mpa ATPase 分子名称: AAA ATPase forming ring-shaped complexes, Proteasome subunit alpha, Proteasome subunit beta, ... 著者 Xiao, X, Li, H. 登録日 2022-06-06 公開日 2022-08-03 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 The beta-Grasp Domain of Proteasomal ATPase Mpa Makes Critical Contacts with the Mycobacterium tuberculosis 20S Core Particle to Facilitate Degradation. Msphere, 7, 2022
8D6Y	Structure of the Mycobacterium tuberculosis 20S proteasome bound to the ADP-bound Mpa ATPase 分子名称: AAA ATPase forming ring-shaped complexes, Proteasome subunit alpha, Proteasome subunit beta, ... 著者 Xiao, X, Li, H. 登録日 2022-06-06 公開日 2022-08-03 最終更新日 2023-08-16 実験手法 ELECTRON MICROSCOPY (10 Å) 主引用文献 The beta-Grasp Domain of Proteasomal ATPase Mpa Makes Critical Contacts with the Mycobacterium tuberculosis 20S Core Particle to Facilitate Degradation. Msphere, 7, 2022
8D7K	Bifunctional Inhibition of Neutrophil Elastase and Cathepsin G by Eap2 from S. aureus 分子名称: Cathepsin G, C-terminal truncated form, Extracellular Adherence Protein, ... 著者 Gido, C.D, Herdendorf, T.J, Geisbrecht, B.V. 登録日 2022-06-07 公開日 2023-06-14 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Bifunctional Inhibition of Neutrophil Elastase and Cathepsin G by Eap2 from S. aureus To Be Published
8D9T	AP-1, Arf1, Nef lattice on MHC-I lipopeptide incorporated narrow membrane tubes, centered on gamma-Arf1 分子名称: ADP ribosylation factor 1, AP-1 complex subunit beta-1, AP-1 complex subunit gamma-1, ... 著者 Hooy, R.M, Hurley, J.H. 登録日 2022-06-11 公開日 2022-11-09 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (20 Å) 主引用文献 Self-assembly and structure of a clathrin-independent AP-1:Arf1 tubular membrane coat. Sci Adv, 8, 2022
8D9U	AP-1, Arf1, Nef lattice on MHC-I lipopeptide incorporated narrow membrane tubes, centered on beta-Arf1 分子名称: ADP-ribosylation factor 1, AP-1 complex subunit beta-1, AP-1 complex subunit gamma-1, ... 著者 Hooy, R.M, Hurley, J.H. 登録日 2022-06-11 公開日 2022-11-09 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (20 Å) 主引用文献 Self-assembly and structure of a clathrin-independent AP-1:Arf1 tubular membrane coat. Sci Adv, 8, 2022
8D9V	gamma-Arf1 homodimeric interface within AP-1, Arf1, Nef lattice on narrow membrane tubes 分子名称: ADP ribosylation factor 1, AP-1 complex subunit beta-1, AP-1 complex subunit gamma-1, ... 著者 Hooy, R.M, Hurley, J.H. 登録日 2022-06-11 公開日 2022-11-09 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (9.4 Å) 主引用文献 Self-assembly and structure of a clathrin-independent AP-1:Arf1 tubular membrane coat. Sci Adv, 8, 2022
8D9W	beta-Arf1 homodimeric interface within AP-1, Arf1, Nef, MHC-I lattice on narrow tubes 分子名称: ADP-ribosylation factor 1, AP-1 complex subunit beta-1, AP-1 complex subunit gamma-1, ... 著者 Hooy, R.H, Hurley, J.H. 登録日 2022-06-11 公開日 2023-07-05 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (9.3 Å) 主引用文献 Self-assembly and structure of a clathrin-independent AP-1:Arf1 tubular membrane coat. Sci Adv, 8, 2022
8DAP	[GA/TC] Self-Assembled 3D DNA Tensegrity Triangle with 24 bp Arm Length forming a Trigonal Hexagon 分子名称: DNA (5'-D(*GP*AP*GP*CP*CP*TP*AP*CP*CP*CP*TP*GP*TP*AP*CP*GP*GP*AP*CP*AP*TP*CP*AP*G)-3'), DNA (5'-D(*TP*CP*CP*TP*GP*AP*TP*GP*TP*GP*GP*CP*TP*AP*GP*GP*C)-3'), DNA (5'-D(P*TP*AP*CP*AP*CP*CP*GP*TP*AP*CP*AP*CP*CP*GP*TP*AP*CP*AP*CP*CP*G)-3') 著者 Lu, B, Vecchioni, S, Ohayon, Y.P, Seeman, N.C, Mao, C, Sha, R. 登録日 2022-06-13 公開日 2023-01-25 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (6.47 Å) 主引用文献 Highly Symmetric, Self-Assembling 3D DNA Crystals with Cubic and Trigonal Lattices. Small, 19, 2023
8DBP	E. coli ATP synthase imaged in 10mM MgATP State1 "half-up 分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase epsilon chain, ... 著者 Sobti, M, Stewart, A.G. 登録日 2022-06-14 公開日 2023-01-25 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Changes within the central stalk of E. coli F 1 F o ATP synthase observed after addition of ATP. Commun Biol, 6, 2023
8DBQ	E. coli ATP synthase imaged in 10mM MgATP State1 "half-up" Fo classified 分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase epsilon chain, ... 著者 Sobti, M, Stewart, A.G. 登録日 2022-06-14 公開日 2023-01-25 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (4 Å) 主引用文献 Changes within the central stalk of E. coli F 1 F o ATP synthase observed after addition of ATP. Commun Biol, 6, 2023
8DBR	E. coli ATP synthase imaged in 10mM MgATP State2 "half-up 分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase epsilon chain, ... 著者 Sobti, M, Stewart, A.G. 登録日 2022-06-14 公開日 2023-01-25 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Changes within the central stalk of E. coli F 1 F o ATP synthase observed after addition of ATP. Commun Biol, 6, 2023
8DBT	E. coli ATP synthase imaged in 10mM MgATP State2 "down 分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase epsilon chain, ... 著者 Sobti, M, Stewart, A.G. 登録日 2022-06-14 公開日 2023-01-25 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Changes within the central stalk of E. coli F 1 F o ATP synthase observed after addition of ATP. Commun Biol, 6, 2023
8DBU	E. coli ATP synthase imaged in 10mM MgATP State2 "down" Fo classified 分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase epsilon chain, ... 著者 Sobti, M, Stewart, A.G. 登録日 2022-06-14 公開日 2023-01-25 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Changes within the central stalk of E. coli F 1 F o ATP synthase observed after addition of ATP. Commun Biol, 6, 2023
8DBV	E. coli ATP synthase imaged in 10mM MgATP State3 "down 分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase epsilon chain, ... 著者 Sobti, M, Stewart, A.G. 登録日 2022-06-14 公開日 2023-01-25 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (3.7 Å) 主引用文献 Changes within the central stalk of E. coli F 1 F o ATP synthase observed after addition of ATP. Commun Biol, 6, 2023
8DBW	E. coli ATP synthase imaged in 10mM MgATP State3 "down" Fo classified 分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase epsilon chain, ... 著者 Sobti, M, Stewart, A.G. 登録日 2022-06-14 公開日 2023-01-25 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (4.1 Å) 主引用文献 Changes within the central stalk of E. coli F 1 F o ATP synthase observed after addition of ATP. Commun Biol, 6, 2023
8DCM	Crystal structure of Clostridioides difficile binary toxin proCDTb lacking D4 in complex with BINTOXB/22 Fab 分子名称: ADP-ribosylating binary toxin binding subunit CdtB, BINTOXB/22 Fab heavy chain, BINTOXB/22 Fab light chain, ... 著者 Goldsmith, J.A, McLellan, J.S. 登録日 2022-06-16 公開日 2023-04-05 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural Basis for Binding of Neutralizing Antibodies to Clostridioides difficile Binary Toxin. J.Bacteriol., 205, 2023
8DD3	Human GABAA receptor alpha1-beta2-gamma2 subtype in complex with GABA plus DMCM 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GAMMA-AMINO-BUTANOIC ACID, ... 著者 Zhu, S, Hibbs, R.E. 登録日 2022-06-17 公開日 2022-08-17 最終更新日 2023-11-15 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Structural and dynamic mechanisms of GABA A receptor modulators with opposing activities. Nat Commun, 13, 2022
8DE6	Oligomeric C9 in complex with aE11 Fab 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Complement component C9, ... 著者 Bayly-Jones, C. 登録日 2022-06-20 公開日 2023-01-25 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 The neoepitope of the complement C5b-9 Membrane Attack Complex is formed by proximity of adjacent ancillary regions of C9. Commun Biol, 6, 2023
8DHX	Human liver ferritin 分子名称: Ferritin heavy chain 著者 Zhang, Z. 登録日 2022-06-28 公開日 2023-07-12 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (2.92 Å) 主引用文献 Human liver ferritin To Be Published
8DLI	Cryo-EM structure of SARS-CoV-2 Alpha (B.1.1.7) spike protein 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein 著者 Zhu, X, Mannar, D, Saville, J.W, Srivastava, S.S, Berezuk, A.M, Zhou, S, Tuttle, K.S, Subramaniam, S. 登録日 2022-07-08 公開日 2022-08-31 実験手法 ELECTRON MICROSCOPY (2.56 Å) 主引用文献 SARS-CoV-2 variants of concern: spike protein mutational analysis and epitope for broad neutralization. Nat Commun, 13, 2022

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