[English] 日本語
EMN statistics
- Statistics of 3DEM data in EMDB & PDB -

-
Display options

-
Annotation about this statistics

  • Some data are modified
  • Counted not per "structre" but per data entry
  • Click column head to sort ([Shift] + click for multi-column sort)
  • Only representative items are shown

-
Statistics - 3D reconstruction Algorithm

3D reconstruction AlgorithmNumber of data entries
"EXACT FILTER" BACK PROJECTION1
+/- 75 DEGREE DUAL-AXIS ELECTRO...4
2-D CRYSTALLOGRAPHY1
2D CRYSTALLOGRAPHY1
2D-CRYSTALS1
3D RECONSTRUCTION FROM RANDOMLY...1
3D RECONSTRUCTIONS WERE CALCULA...1
ANGULAR RECONSTITUTION10
ANGULAR RECONSTITUTION FOLLOWED...1
ANGULAR RECONSTITUTION FOR INIT...1
ANGULAR RECONSTITUTION, EXACT F...1
ANGULAR RECONSTITUTION, PROJECT...8
ANGULAR RECONSTITUTION, REFINEMENT2
ANGULAR RECONSTITUTION,ITERATIV...1
ANGULAR REFINEMENT2
BACK PROJECTION7
BACK PROJECTION INTERPOLATED IN...1
BACK PROJECTION WITH INTEGRATED...1
BAYESIAN ORIENTATION REFINEMENT...1
CENTRAL SECTIONS1
COMMON CROSSOVERS2
COMMON LINE67
COMMON LINE FOR ORIENTATION, CE...1
COMMON LINE FOURIER1
COMMON LINE IN MPSA1
COMMON LINE, FOURIER1
COMMON LINE, MULTIPATH SIMULTAN...1
COMMON LINE, POLAR-FOURIER-TRAN...1
COMMON LINE, POLAR-FOURIER-TRAN...1
COMMON LINE, POLAR-FOURIER-TRAN...4
COMMON LINE, PROJECTION MATCHING11
CONSTRAINED SINGLE PARTICLE TOM...1
CROSS CORRELATION COEFFICIENT1
CROSS-CORRELATION6
CROSS-CORRELATION COEFFICIENT1
CROSS-CORRELATION IN REAL, RECI...1
CROSS-CORRELATION, MERGING OF C...2
CRYO-ELECTRON MICROSCOPY, 3D IM...1
CRYO-EM ALIGNMENT1
CRYSTALLOGRAPHY8
CUSTOM SCRIPTS, PROJECTION MATCHING1
DUAL AXIS TILT SERIES ELECTRON ...11
ELECTRON TOMOGRAPHY, 3-D AVERAGE1
EMAN1
EMAN, SINGLE PARTICLE2
EXACT FILTERED BACK PROJECTION1
FIDUCIAL ALIGNMENT, WEIGHTED BA...2
FILTERED BACK PROJECTION1
FOURIER8
FOURIER BESSEL7
FOURIER BESSELMETHOD REFERENCE:...1
FOURIER COMMON LINE, FOURIER- B...1
FOURIER SINC INTERPOLATION (BUI...1
FOURIER SPACE2
FOURIER SPACE RECONSTRUCTION5
FREALIGN3
FREALIGN RANDOMIZED SEARCH1
FSC 0.143 CUT-OFF1
HELICAL 3D RECONSTRUCTION1
HELICAL PROCESSING1
HELICAL RECONSTRUCTION8
HELICAL RECONSTRUCTION USING IH...2
HELICAL RECONSTRUCTION WITH 3D ...1
HELICON, CTER1
ICOSAHEDRAL6
ICOSAHEDRALLY SYMMETRIC MODEL-B...1
IHRSR39
IHRSR (IHRSR)1
IHRSR METHOD (EGELMAN, ULTRAMIC...1
IRSHR1
ITERATIVE 3D-PROJECTION MATCHING1
ITERATIVE MODEL-BASED PROCEDURE2
ITERATIVE REAL SPACE HELICAL RE...1
K-MEANS CLUSTERING1
LATTICE LINE FITTING2
LAYER LINE ANALYSIS1
LOCALIZED RECONSTRUCTION2
MANUAL FITTING1
MARKER FREE ALIGNMENT1
MAXIMUM A POSTERIORI ESTIMATION1
MAXIMUM A POSTERIORI OPTIMIZATION1
MAXIMUM A POSTERIORI PROJECTION...2
MAXIMUM LIKELIHOOD12
MAXIMUM LIKELIHOOD BASED REFINEMENT1
MAXIMUM LIKELIHOOD BASED REFINE...6
MAXIMUM LIKELIHOOD METHOD1
MAXIMUM LIKELIHOOD SUBTOMOGRAM ...1
MAXIMUM LIKELIHOOD-BASED PROJEC...1
MIX OF SINGLE PARTICLE, HELICAL...1
MODEL BASED ANGULAR REFINEMENT1
MODEL BASED POLAR FOURIER TRANS...1
MODEL BASED PROJECTION MATCHING5
MODEL-BASED1
MODEL-BASED ANGULAR REFINEMENT1
MODEL-BASED COMMON LINE1
MODEL-BASED PROJECTION1
MODEL-BASED PROJECTION MATCHING1
MODEL-BASED, POLAR-FOURIER- TRA...1
MODEL-BASED, POLAR-FOURIER-TRAN...1
MPSA2
MPSA FOR ORIENTATION SEARCH, MA...1
MULTI-REFERENCE2
MULTI-REFERENCE PROJECTION MATCHING1
MULTI-REFERENCE TEMPLATE MATCHING9
MULTIPARTICLE REFINEMENT2
n/a22734
PFT4
PFT, OOR, POR1
PHASE RESIDUAL MINIMIZATION1
POLAR FOURIER TRANSFORM8
POLAR FOURIER TRANSFORM METHOD,...1
POLAR FOURIER TRANSFORM, CROSS-...2
POLAR FOURIER TRANSFORM, FOURIE...3
PROJECTION MATCHING146
PROJECTION MATCHING / SPIDER1
PROJECTION MATCHING GRADIENT WI...1
PROJECTION MATCHING IN EMAN2
PROJECTION MATCHING USING A RES...1
PROJECTION MATCHING WITH A GOLD...1
PROJECTION MATCHING WITH EMAN1
PROJECTION MATCHING, BACK PROJE...2
PROJECTION MATCHING, CONJUGATE ...6
PROJECTION MATCHING, CONJUGATE ...12
PROJECTION MATCHING, DIRECT FOU...1
PROJECTION MATCHING, FOURIER1
PROJECTION MATCHING, FOURIER IN...1
PROJECTION MATCHING, FOURIER RE...1
PROJECTION MATCHING, MAXIMUM LI...7
PROJECTION MATCHING, REFINEMENT...1
PROJECTION MATCHING, REFINEMENT...1
PROJECTION MATCHING-BASED ANGUL...2
PROJECTION MATCHING-BASED ANGUL...1
PROJECTION MATCHING: CONJUGATE ...1
R-WEIGHTED BACK PROJECTION1
RANDOM CONICAL TILT1
RANDOM CONICAL TILT FOLLOWED BY...1
RANDOM CONICAL TILT SERIES (CRY...1
RANDOM CONICAL TILT THEN REFERE...1
RANDOM CONICAL TILT, PROJECTION...1
RANDOM SPHERES STARTING MODEL1
REAL1
REAL SPACE HELICAL RECONSTRUCTION2
REAL SPACE HELICAL RECONSTRUCTI...1
REAL SPACE SIRT2
RECIPROCAL SPACE RIGID BODY FIT1
REFERENCE BASED2
REFERENCE BASEDALIGNMENT15
REFERENCE BASEDPROJECTION1
REFERENCE BASEDRECONSTRUCTION4
REFERENCE BASEDREFINEMENT1
REFERENCE BASEDREFINEMENT USING...2
REFERENCE MATCH2
REFERENCE MATCHING1
REFERENCE PROJECTION17
REFERENCE-GUIDED ALIGNMENT1
REFINEMENT IN EMAN21
RELION13
RELION 1.31
SCORE MINIMIZATION5
SEE PRIMARY CITATION1
SIMULTANEOUS ITERATIVE RECONSTR...2
SIMULTANEOUS ITERATIVE RECONSTR...5
SINGLE PARTICLE46
SINGLE PARTICLE 3D RECONSTRUCTION1
SINGLE PARTICLE HELICAL RECONST...1
SINGLE PARTICLE PROJECTION MATCHING1
SINGLE PARTICLE WITH A MODIFICA...3
SINGLE PARTICLE, ICOSAHEDRAL1
SINGLE PARTICLE, REFERENCE BASE...1
SINGLE PARTICLE, REFERENCE BASE...1
SIRT3
SPHERICAL HARMONICS1
SPIDER3
SPIDER SINGLE PARTICLE2
STANDARD EMAN REFINE PROCEDURE1
STANDARD FOURIER BESSELSYNTHESIS2
SUBTOMOGRAM ALIGNMENT, AVERAGING3
SUBTOMOGRAM AVERAGING6
SYMMETRY-ADAPTED FUNCTIONS1
SYMMETRY-MISMATCH RECONSTRUCTIO...1
TEMPLATE BASED2
TEMPLATE MATCHING3
THE INITIAL MODEL WAS OBTAINED ...1
THE PROJECTION MATCHING PROCEDU...1
TOMOGRAPHIC RECONSTRUCTION WEIG...3
TUBES DIVIDED INTO THIRDS, QUAR...1
WEIGHTED BACK PROJECTION3

Download: CSV format (Comma-Separated Values, for Excel, etc.) / TSV format (Tab Separated Values)

+
About EMN statistics

-
EMN Statistics

Statistics of 3DEM data in table and graph styles

  • The table can be sorted. Click the column header to be sorted. (second click to reverse, [Shift]+click for multi-column sort)
  • To show the bar graph in table mode, point the column/row header by mouse courser.
  • To search the correspoinding data, click the cell of value.
  • Examples:

Related info.:Q: What are the data sources of EM Navigator? / EM Navigator / Mar 30, 2013. New page of EM Navigator, EMN Statistics

Read more