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- Statistics of 3DEM data in EMDB & PDB -

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    Statistics - 3D reconstruction Algorithm

    3D reconstruction AlgorithmNumber of data entries
    ""EXACT FILTER"" BACK PROJECTION1
    +/- 75 DEGREE DUAL-AXIS ELECTRO...4
    2-D CRYSTALLOGRAPHY1
    24 IMAGES OF SECTIONS 25 NM THICK1
    2D CRYSTALLOGRAPHY1
    2D CRYSTALS1
    2D PROJECTION1
    2D-CRYSTALS2
    3D AUTOREFINE5
    3D FOURIER SPACE4
    3D MAXIMUM LIKELIHOOD2
    3D RECONSTRUCTION FROM RANDOMLY...2
    3D RECONSTRUCTIONS WERE CALCULA...1
    60 SECTIONS OF 6 NM THICKNESS1
    AB INITIO APPROACH2
    ANGULAR RECONSTITUTION61
    ANGULAR RECONSTITUTION FOLLOWED...1
    ANGULAR RECONSTITUTION FOR INIT...1
    ANGULAR RECONSTITUTION IN IMAGIC1
    ANGULAR RECONSTITUTION IN IMAGI...7
    ANGULAR RECONSTITUTION, ""EXACT...2
    ANGULAR RECONSTITUTION, ANCHOR ...2
    ANGULAR RECONSTITUTION, BACK PR...1
    ANGULAR RECONSTITUTION, COMMON LINE2
    ANGULAR RECONSTITUTION, EXACT F...4
    ANGULAR RECONSTITUTION, PROJECT...28
    ANGULAR RECONSTITUTION, REFINEMENT2
    ANGULAR RECONSTITUTION, SIRT4
    ANGULAR RECONSTITUTION,ITERATIV...2
    ANGULAR RECONSTITUTION/ PROJECT...1
    ANGULAR REFINEMENT25
    ANGULAR REFINEMENT USING A PRIO...2
    ANGULAR REFINEMENT USING AN EXI...1
    ANGULAR REFINEMENT USING AS INI...2
    ANGULAR REFINEMENT USING RADON ...1
    ANGULAR SEARCH2
    ART WITH BLOBS1
    BACK PROJECTION311
    BACK PROJECTION IN FOURIER SPACE1
    BACK PROJECTION INTERPOLATED IN...1
    BACK PROJECTION USING HELICAL P...3
    BACK PROJECTION WITH INTEGRATED...1
    BAYESIAN APPROACH FOR PROJECTIO...6
    BAYESIAN ORIENTATION REFINEMENT...1
    C12 -> C1 SYMMETRY RELAX FROM F...1
    C12 -> C1 SYMMETRY RELAX FROM F...1
    C5 -> C1 SYMMETRY RELAX FROM SA...1
    C8 -> C1 SYMMETRY RELAX FROM FA...1
    C8 -> C1 SYMMETRY RELAX FROM SA...2
    CCC WITH CONSIDERATION GIVEN FO...1
    CENTRAL SECTIONS3
    CLASS AVERAGE2
    COMMON CROSSOVERS5
    COMMON LINE447
    COMMON LINE FOR INITIAL MODEL F...1
    COMMON LINE FOR INITIAL MODEL, ...1
    COMMON LINE FOR ORIENTATION, CE...1
    COMMON LINE FOR STARTING MODEL ...1
    COMMON LINE FOR STARTING MODEL,...1
    COMMON LINE FOURIER2
    COMMON LINE IN MPSA1
    COMMON LINE POLAR FOURIER TRANS...1
    COMMON LINE WITH EMAN22
    COMMON LINE WITH IMAGIC FOR INI...1
    COMMON LINE, EMAN MULTIREFINE1
    COMMON LINE, FOURIER2
    COMMON LINE, FOURIER BESSEL1
    COMMON LINE, FOURIER METHOD BAS...1
    COMMON LINE, ITERATIVE ANGULAR ...1
    COMMON LINE, MULTIPATH SIMULTAN...1
    COMMON LINE, PFT1
    COMMON LINE, POLAR FOURIER TRAN...1
    COMMON LINE, POLAR-FOURIER-TRAN...1
    COMMON LINE, POLAR-FOURIER-TRAN...1
    COMMON LINE, POLAR-FOURIER-TRAN...4
    COMMON LINE, PROJECTION MATCHING35
    COMMON LINE, REFINEMENT BY BACK...1
    COMMON LINE, SINOGRAMS1
    COMMON LINE, SYMMETRY-ADAPTED S...3
    CONJUGATE GRADIENTS WITH REGULA...1
    CONSENSUS STARTING MODEL CREATE...1
    CONSTRAINED SINGLE PARTICLE TOM...2
    CROS-COMMON LINE1
    CROSS CORRELATION3
    CROSS CORRELATION COEFFICIENT2
    CROSS CORRELATION PROJECTION MA...1
    CROSS-CORRELATION21
    CROSS-CORRELATION COEFFICIENT4
    CROSS-CORRELATION IN REAL, RECI...1
    CROSS-CORRELATION, BACK PROJECTION1
    CROSS-CORRELATION, BACK PROJECT...2
    CROSS-CORRELATION, MERGING OF C...2
    CROSS-CORRELATION, WBP10
    CRYO-ELECTRON MICROSCOPY, 3D IM...1
    CRYO-ELECTRON TOMOGRAPHY2
    CRYO-EM ALIGNMENT1
    CRYSTALLOGRAPHY4
    CUSTOM SCRIPTS, PROJECTION MATCHING3
    DIRECT FOURIER INVERSION2
    DIRECT FOURIER SPACE RECONSTRUCTION1
    DUAL AXIS TILT SERIES ELECTRON ...11
    ECHO-CORRELATION1
    ELECTRON CRYSTALLOGRAPHY3
    ELECTRON TOMOGRAPHY1
    ELECTRON TOMOGRAPHY, 3-D AVERAGE1
    EMAN4
    EMAN COMMON LINE1
    EMAN ICOSANY2
    EMAN PROCEDURE1
    EMAN ROUTINE3
    EMAN, SINGLE PARTICLE2
    EMAN2 COMMON LINE1
    EMPIRICAL BAYESIAN APPROACH2
    EVERY IMAGE IS THE AVERAGE OF T...2
    EXACT BACK PROJECTION6
    EXACT FILTERED BACK PROJECTION15
    FFIDUCIAL MARKER ALIGNMENT WITH...1
    FIDUCIAL ALIGNMENT, WEIGHTED BA...6
    FIDUCIAL MARKER ALIGNMENT WITH ...2
    FILTERED BACK PROJECTION9
    FOCUSED ET RECONSTRUCTION (FETR...2
    FOCUSED ET RECONSTRUCTION ALGOR...18
    FOURIER57
    FOURIER BESSEL41
    FOURIER BESSEL/1
    FOURIER BESSELHELICAL RECONSTRU...1
    FOURIER BESSELINVERSION1
    FOURIER BESSELMETHOD REFERENCE:...1
    FOURIER BESSELSYNTHESIS4
    FOURIER COMMON LINE1
    FOURIER COMMON LINE, FOURIER BE...1
    FOURIER COMMON LINE, FOURIER- B...1
    FOURIER SINC INTERPOLATION (BUI...1
    FOURIER SPACE284
    FOURIER SPACE 3D RECONSTRUCTION1
    FOURIER SPACE PROJECTION MATCHI...11
    FOURIER SPACE RECONSTRUCTION7
    FOURIER-BASED PROJECTION MATCHING1
    FREALIGN21
    FREALIGN RANDOMIZED SEARCH4
    FSC 0.143 CUT-OFF1
    GOLD FIDUCIALS2
    HELICAL 3D RECONSTRUCTION1
    HELICAL ANALYSIS1
    HELICAL FOURIER BESSEL1
    HELICAL PROCESSING4
    HELICAL RECONSTRUCTION26
    HELICAL RECONSTRUCTION BY IHRSR2
    HELICAL RECONSTRUCTION USING IH...2
    HELICAL RECONSTRUCTION USING PH...2
    HELICAL RECONSTRUCTION WITH 3D ...1
    HELICAL SYMMETRIZATION1
    HELICAL, REAL SPACE RECONSTRUCTION1
    HELICAL, SINGLE PARTICLE2
    HELICON, CTER2
    ICOS -> C1 SYMMETRY RELAX FROM ...1
    ICOSAHEDRAL13
    ICOSAHEDRAL RECONSTRUCTION, TAI...2
    ICOSAHEDRALLY SYMMETRIC MODEL-B...1
    IHRSR110
    IHRSR (IHRSR)2
    IHRSR ADAPTED FOR MICROTUBULES ...1
    IHRSR METHOD (EGELMAN, ULTRAMIC...1
    IHRSR, PROJECTION MATCHING IN EMAN1
    IMAGIC PROJECTION MATCHING1
    IMOD1
    IMOD, IN-HOUSE PROCEDURES3
    IMOD, SIRT1
    IN-HOUSE1
    INDIVIDUAL-PARTICLE ELECTRON TO...1
    INITIAL ANGLES WERE KNOWN FROM ...1
    INITIAL MODEL WAS RECONSTRUCTED...1
    INITIATED WITH COMMON LINE6
    INTERATIVE FOURIER BESSELHELICA...1
    IPET1
    IRSHR1
    ITERATIVE 3D-PROJECTION MATCHING1
    ITERATIVE ALGEBRAIC1
    ITERATIVE ALGEBRAIC RECONSTRUCTION4
    ITERATIVE ANGULAR REFINEMENT, P...1
    ITERATIVE CLASSIFICATION AGAINS...1
    ITERATIVE CROSS CORRELATION AGA...2
    ITERATIVE FOURIER BESSELHELICAL...1
    ITERATIVE MISSING WEDGE WEIGHTE...8
    ITERATIVE MODEL BASED RECONSTRU...1
    ITERATIVE MODEL-BASED PROCEDURE12
    ITERATIVE MULTI-REFERENCE ALIGNMENT1
    ITERATIVE PROJECTION MATCHING4
    ITERATIVE PROJECTION MATCHING, ...1
    ITERATIVE PROJECTION MATCHING, ...1
    ITERATIVE REAL SPACE HELICAL RE...1
    ITERATIVE RECONSTRUCTION2
    ITERATIVE RECONSTRUCTION AFTER ...4
    K-MEANS CLUSTERING2
    LATTICE LINE FITTING4
    LAYER LINE ANALYSIS2
    LAYER LINES BESSEL ORDERS2
    LAYER LINES, BESSEL ORDERS5
    LOCALIZED RECONSTRUCTION6
    MANUAL FITTING1
    MARKER FREE ALIGNMENT4
    MASKED ANGULAR RECONSTITUTION1
    MATCH PROJECTION1
    MAXIMUM A POSTERIORI1
    MAXIMUM A POSTERIORI / PROJECTI...3
    MAXIMUM A POSTERIORI ESTIMATION1
    MAXIMUM A POSTERIORI OPTIMIZATION5
    MAXIMUM A POSTERIORI PROJECTION...2
    MAXIMUM LIKELIHOOD71
    MAXIMUM LIKELIHOOD BASED REFINEMENT1
    MAXIMUM LIKELIHOOD BASED REFINE...6
    MAXIMUM LIKELIHOOD METHOD1
    MAXIMUM LIKELIHOOD REFINEMENT3
    MAXIMUM LIKELIHOOD SUBTOMOGRAM ...1
    MAXIMUM LIKELIHOOD, FOURIER4
    MAXIMUM LIKELIHOOD-BASED PROJEC...1
    MAXIMUM LIKELYHOOD3
    MAXIMUM-A-POSTERIORI ESTIMATION...1
    MAXIMUM-LIKELIHOOD2
    MAXIMUM-LIKELIHOOD BASED PROJEC...3
    MAXIMUM-LIKELIHOOD MULTIREFINE1
    MAXIUM LIKELIHOOD1
    MELON BALL ALIGNMENT1
    MERGE IMAGES OF TILTED CRYSTALS1
    MISSING WEDGE WEIGHTED CORRELAT...2
    MIX OF SINGLE PARTICLE, HELICAL...1
    ML, PROJECTION MATCHING, WEIGHT...2
    ML3D1
    ML3D + PROJECTION MATCHING4
    MLF3D7
    MODEL BASED6
    MODEL BASED - PFT1
    MODEL BASED ANGULAR REFINEMENT1
    MODEL BASED POLAR FOURIER TRANS...1
    MODEL BASED PROJECTION MATCHING6
    MODEL BASED, ICOSAHEDRAL3
    MODEL REFERENCE1
    MODEL-BASED11
    MODEL-BASED ANGULAR REFINEMENT1
    MODEL-BASED APPROACH USING FOURIER3
    MODEL-BASED BACK PROJECTION1
    MODEL-BASED COMMON LINE2
    MODEL-BASED PROJECTION2
    MODEL-BASED PROJECTION MATCHING1
    MODEL-BASED PROJECTION METHODS ...3
    MODEL-BASED, POLAR-FOURIER- TRA...1
    MODEL-BASED, POLAR-FOURIER-TRAN...1
    MONTE CARLO METHOD (EMAN2)1
    MPSA6
    MPSA FOR ORIENTATION SEARCH, MA...1
    MRC1
    MULTI-PARTICLE REFINEMENT4
    MULTI-REFERENCE2
    MULTI-REFERENCE ALIGNMENT5
    MULTI-REFERENCE PROJECTION MATCHING3
    MULTI-REFERENCE TEMPLATE MATCHING16
    MULTI-RESOLUTION REFINEMENT PRO...1
    MULTIPARTICLE REFINEMENT4
    MULTIREFERENCE ALIGNMENT1
    MULTIREFERENCE ALIGNMENT, BACK ...1
    MULTIVARIATE STATISTICAL ANALYS...1
    n/a3481
    ORIENTATION, ORIGINS DETERMINED...2
    ORIGIN REFINEMENT1
    ORTHOGONAL TILT RECONSTRUCTION1
    PATCH TRACKING, BACK PROJECTION1
    PCO1
    PFT25
    PFT, FOURIER BESSEL2
    PFT, OOR, POR1
    PFT, P3DR1
    PFT2 EM3DR23
    PHASE RESIDUAL MINIMIZATION3
    POLAR FOURIER TRANSFORM30
    POLAR FOURIER TRANSFORM METHOD,...1
    POLAR FOURIER TRANSFORM, CROSS-...2
    POLAR FOURIER TRANSFORM, FOURIE...4
    POLAR FOURIER TRANSFORM, FOURIE...1
    POR1
    POR ORIENTATION SEARCH1
    POR ORIENTATION SEARCH, 3D RECO...1
    PRO1
    PROJECTION MATCHING706
    PROJECTION MATCHING (GRID SEARC...1
    PROJECTION MATCHING / SPIDER1
    PROJECTION MATCHING ALIGNMENT B...2
    PROJECTION MATCHING FOURIER3
    PROJECTION MATCHING FROM RANDOM...1
    PROJECTION MATCHING FROM RCT MODEL1
    PROJECTION MATCHING GRADIENT WI...1
    PROJECTION MATCHING IN EMAN2
    PROJECTION MATCHING IN SPIDER2
    PROJECTION MATCHING INITIATED W...2
    PROJECTION MATCHING ITERATIVE R...1
    PROJECTION MATCHING PROCEDURE2
    PROJECTION MATCHING REFINEMENT7
    PROJECTION MATCHING TO AN AB IN...4
    PROJECTION MATCHING TO ECOR124 ...1
    PROJECTION MATCHING TO TOMOGRAP...2
    PROJECTION MATCHING USING A RES...5
    PROJECTION MATCHING WITH A GOLD...1
    PROJECTION MATCHING WITH EMAN1
    PROJECTION MATCHING, BACK PROJE...1
    PROJECTION MATCHING, BACK PROJE...2
    PROJECTION MATCHING, CLASS AVER...4
    PROJECTION MATCHING, COMMON LINE1
    PROJECTION MATCHING, CONJUGATE ...6
    PROJECTION MATCHING, CONJUGATE ...12
    PROJECTION MATCHING, DIRECT FOU...3
    PROJECTION MATCHING, FOURIER2
    PROJECTION MATCHING, FOURIER IN...7
    PROJECTION MATCHING, FOURIER RE...6
    PROJECTION MATCHING, MAXIMUM LI...15
    PROJECTION MATCHING, POLAR FOUR...2
    PROJECTION MATCHING, RCT1
    PROJECTION MATCHING, REAL SPACE...1
    PROJECTION MATCHING, REFINEMENT...1
    PROJECTION MATCHING, REFINEMENT...1
    PROJECTION MATCHING, SIRT1
    PROJECTION MATCHING, WEIGHTED B...2
    PROJECTION MATCHING-BASED ANGUL...2
    PROJECTION MATCHING-BASED ANGUL...1
    PROJECTION MATCHING: CONJUGATE ...1
    PROTOMO1
    R-WEIGHTED BACK PROJECTION1
    RAD, COMMON LINE2
    RANDOM CONICAL1
    RANDOM CONICAL TILT90
    RANDOM CONICAL TILT FOLLOWED BY...3
    RANDOM CONICAL TILT RECONSTRUCTION59
    RANDOM CONICAL TILT SERIES (CRY...1
    RANDOM CONICAL TILT SERIES, REF...1
    RANDOM CONICAL TILT THEN REFERE...2
    RANDOM CONICAL TILT, MAXIMUM LI...1
    RANDOM CONICAL TILT, ML3D CLASS...6
    RANDOM CONICAL TILT, PROJECTION...1
    RANDOM CONICAL TILT, PROJECTION...2
    RANDOM CONICAL TILT, PROJECTION...2
    RANDOM CONICAL, PROJECTION MATCHING1
    RANDOM MODEL1
    RANDOM SPHERES STARTING MODEL1
    RCT75
    RCT BACK PROJECTION, PROJECTION...1
    RCT FOLLOWED BY PROJECTION MATCHING2
    RCT FOLLOWED BY PROJECTION MATC...2
    RCT, ITERATIVE PROJECTION MATCH...1
    RCT, PROJECTION MATCHING1
    REAL1
    REAL SPACE HELICAL RECONSTRUCTION2
    REAL SPACE HELICAL RECONSTRUCTI...1
    REAL SPACE PROJECTION MATCHING5
    REAL SPACE REFINEMENT1
    REAL SPACE SIRT2
    REAL-SPACE HELICAL RECONSTRUCTION2
    REAL-SPACE HELICAL, VOLUME AVER...2
    RECIPROCAL SPACE ALGINMENT1
    RECIPROCAL SPACE RIGID BODY FIT1
    REF. FREE ALIGNMENT, MULTI-REFE...7
    REFERENCE BASED18
    REFERENCE BASEDALIGNEMENT2
    REFERENCE BASEDALIGNMENT19
    REFERENCE BASEDPROJECTION2
    REFERENCE BASEDPROJECTION ALIGNMENT3
    REFERENCE BASEDPROJECTION MATCHING5
    REFERENCE BASEDRECONSTRUCTION9
    REFERENCE BASEDREFINEMENT1
    REFERENCE BASEDREFINEMENT USING...4
    REFERENCE MATCH6
    REFERENCE MATCHING6
    REFERENCE PROJECTION56
    REFERENCE PROJECTION MATCHING2
    REFERENCE-FREE 2D CLASSIFICATIO...1
    REFERENCE-GUIDED ALIGNMENT1
    REFINEMENT BASED ON AN INITIAL ...5
    REFINEMENT IN EMAN21
    REFINEMENT OF RCT STRUCTURE1
    RELION34
    RELION 1.23
    RELION 1.313
    RELION 1.3 AUTO-REFINE2
    RELION 3D AUTOREFINE1
    RELION 3D REFINEMENT1
    RELION AUTO_REFINE1
    RELION SUB-TOMOGRAM AVERAGING2
    RICHARDSON CONSTRAINED BACK PRO...3
    RICO, FPM1
    RICO/SYMMETRY ADAPTED FUNCTIONS1
    ROTAN1
    ROTAN, PROJECTION MATCHING1
    ROTATIONAL ANALYSIS1
    ROTATIONAL ANALYSIS, PROJECTION...1
    SCORE MINIMIZATION10
    SEE PRIMARY CITATION1
    SEE THE ADDITIONAL REFERENCE1
    SHADOW MATCHING1
    SIMPLE2
    SIMULTANEOUS ITERATIVE (SIRT)7
    SIMULTANEOUS ITERATIVE RECONSTR...23
    SIMULTANEOUS ITERATIVE RECONSTR...11
    SINGLE PARTICLE119
    SINGLE PARTICLE (CUSTOMIZED SOF...1
    SINGLE PARTICLE (CUSTOMIZED)1
    SINGLE PARTICLE 3D RECONSTRUCTION1
    SINGLE PARTICLE HELICAL RECONST...2
    SINGLE PARTICLE PROJECTION MATCHING1
    SINGLE PARTICLE WITH A MODIFICA...5
    SINGLE PARTICLE, ICOSAHEDRAL1
    SINGLE PARTICLE, MAXIMUM LIKELIHOOD1
    SINGLE PARTICLE, PROJECTION MAT...3
    SINGLE PARTICLE, REFERENCE BASE...1
    SINGLE PARTICLE, REFERENCE BASE...1
    SINOGRAM CORRELATION FOLLOWED B...1
    SIRT29
    SIRT - ITERATIVE ALGEBRAIC RECO...1
    SPHERICAL HARMONICS1
    SPHERICALLY-CONSTRAINED2
    SPIDER3
    SPIDER SINGLE PARTICLE2
    SPRING HELICAL RECONSTRUCTION2
    STANDARD EMAN REFINE PROCEDURE1
    STANDARD FOURIER BESSELSYNTHESIS4
    SUB-TOMOGRAM AVERAGE1
    SUB-TOMOGRAM AVERAGING4
    SUBTOMOGRAM ALIGNMENT, AVERAGING7
    SUBTOMOGRAM AVERAGING50
    SUBTOMOGRAM AVERAGING, SINGLE P...1
    SUBVOLUME AVERAGING7
    SYMMETRY ADAPTED FUNCTIONS - RI...2
    SYMMETRY ADAPTED FUNCTIONS BASED1
    SYMMETRY ADAPTED FUNCTIONS WITH...2
    SYMMETRY-ADAPTED FUNCTIONS1
    SYMMETRY-MISMATCH RECONSTRUCTIO...1
    TEMPLATE BASED9
    TEMPLATE MATCHING9
    TERATIVE ALGEBRAIC RECONSTRUCTION1
    THE HELICAL MAP WAS PRODUCED US...1
    THE INITIAL MODEL WAS OBTAINED ...1
    THE PROJECTION MATCHING PROCEDU...1
    TOMOGRAPHIC RECONSTRUCTION WEIG...3
    TOMOGRAPHIC RECONSTRUCTION, SUB...7
    TOMOGRAPHIC RECONTRUCTION, SUB-...4
    TOMOGRAPHIC SUBVOLUME AVERAGING1
    TOMOGRAPHY10
    TOMOGRAPHY FOLLOWED BY SUB-TOMO...1
    TRUE-3D3
    TUBES DIVIDED INTO THIRDS, QUAR...1
    WBP1
    WEIGHT BACK PROJECTION OF THE T...2
    WEIGHTED AVERAGING OF RANDOM CO...2
    WEIGHTED BACK PROJECTION99
    WEIGHTED BACK PROJECTION, 3D AL...2
    WEIGHTED BACK PROJECTION, SIRT1
    WEIGHTED BACK PROJECTION, SUB-V...4
    WEIGHTED BACK PROJECTION, SUBTO...1
    WEIGHTED BACK PROJECTION, TOMOG...1
    WIGHTED BACK PROJECTION1
    XMIPP PROJECTION MATCHING2

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    About EMN statistics

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    EMN Statistics

    Statistics of 3DEM data in table and graph styles

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    Related info.: EMDB / PDB / Q: What is the data source of EM Navigator? / EM Navigator / Mar 30, 2013. New page of in EM Navigator, statistics

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