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- SASDBG2: Wild-type archaeal biofilm regulator 1 (ABfR1: Transcriptional re... -

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Basic information

Entry
Database: SASBDB / ID: SASDBG2
SampleWild-type archaeal biofilm regulator 1 (ABfR1: Transcriptional regulator ArsR family).
  • Wild-type archaeal biofilm regulator 1 (ABfR1: Transcriptional regulator ArsR family). (protein), ABfR1-WT, Sulfolobus acidocaldarius
Function / homologyTranscription regulator TrmB, N-terminal / Sugar-specific transcriptional regulator TrmB / Winged helix DNA-binding domain superfamily / Winged helix-like DNA-binding domain superfamily / Transcriptional regulator ArsR family
Function and homology information
Biological speciesSulfolobus acidocaldarius (acidophilic)
Contact author
  • Ankan Banerjee (Philipps-Universität Marburg, Marburg, Germany)

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

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Models

Model #398
Type: dummy / Radius of dummy atoms: 3.00 A / Chi-square value: 0.769
Search similar-shape structures of this assembly by Omokage search (details)

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Sample

SampleName: Wild-type archaeal biofilm regulator 1 (ABfR1: Transcriptional regulator ArsR family).
Specimen concentration: 2.50-9.00
BufferName: 20 mM HEPES 200 mM NaCl / Concentration: 20.00 mM / pH: 7.5 / Composition: 200 mM NaCl
Entity #263Name: ABfR1-WT / Type: protein
Description: Wild-type archaeal biofilm regulator 1 (ABfR1: Transcriptional regulator ArsR family).
Formula weight: 13.16 / Num. of mol.: 2 / Source: Sulfolobus acidocaldarius / References: UniProt: Q4JBH1
Sequence:
MSIEITEKYV ILKRFLSVAY GLSESEIDTF LRILESKEGK DIDAISAELK ISKSRTSIIL KKLSDAGLVD KEKGDNMKGG RPKYVYSVNK EELKNRLIAK SEELCKELNQ VIKSFI

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Experimental information

BeamInstrument name: ESRF BM29 / City: Grenoble / 国: France / Type of source: X-ray synchrotron / Wavelength: 0.93 Å / Dist. spec. to detc.: 2.43 mm
DetectorName: Pilatus 1M
Scan
Title: ABfR1 (Transcriptional regulator ArsR family) / Measurement date: Aug 27, 2015 / Storage temperature: 4 °C / Cell temperature: 4 °C / Exposure time: 20 sec. / Number of frames: 10 / Unit: 1/nm /
MinMax
Q0.0327 4.7313
Distance distribution function P(R)
Sofotware P(R): GNOM 5.0 / Number of points: 770 /
MinMax
Q0.173787 3.79068
P(R) point1 770
R0 9.5
Result
Type of curve: single_conc /
ExperimentalPorod
MW26.9 kDa23.4 kDa
Volume-46.78 nm3

P(R)Guinier
Forward scattering, I026.9 26.7
Radius of gyration, Rg2.64 nm2.6 nm

MinMax
D-9.75
Guinier point18 98

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