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Open data
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Basic information
Entry | Database: SASBDB / ID: SASDDP9 |
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![]() | C-terminal half of pseudorabies virus tegument protein UL37
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Function / homology | Herpesvirus UL37 / Herpesvirus UL37 tegument protein / virion assembly / metal ion binding / UL37![]() |
Biological species | ![]() ![]() |
![]() | ![]() Title: The dynamic nature of the conserved tegument protein UL37 of herpesviruses. Authors: "Koenigsberg A", "Heldwein E" |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
-Models
Model #2171 | ![]() Type: dummy / Radius of dummy atoms: 3.60 A / Symmetry: P1 / Chi-square value: 1.120 ![]() |
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Model #2172 | ![]() Type: dummy / Software: (5.0) / Radius of dummy atoms: 3.50 A / Symmetry: P1 / Comment: Mean NSD (10 models ) = 0.78 / Chi-square value: 1.120 ![]() |
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Sample
![]() | Name: C-terminal half of pseudorabies virus tegument protein UL37 Specimen concentration: 6 mg/ml |
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Buffer | Name: 100 mM HEPES 150 mM NaCl 5% glycerol 0.1 mM tris(2-carboxyethyl)phosphine (TCEP) pH: 7.5 |
Entity #1187 | Type: protein / Description: Tegument protein UL37 / Formula weight: 48.525 / Num. of mol.: 1 / Source: Suid alphaherpesvirus 1 / References: UniProt: Q911W0 Sequence: GPGSGLRADG AGETPMEAPT SAALVDLAAA ADLVNYPSMV HLEAMADPSF APFFVVTAVA DAYNCLLTAS YDRRADLAQV LTWARDYGAG LIPNVSGYRT KLAALVAALA REDLTVAHAR NVEALAHELH GVVRAAAEVL EAPAPAPPSL AASAFLGDLL ARALRRRLED ...Sequence: GPGSGLRADG AGETPMEAPT SAALVDLAAA ADLVNYPSMV HLEAMADPSF APFFVVTAVA DAYNCLLTAS YDRRADLAQV LTWARDYGAG LIPNVSGYRT KLAALVAALA REDLTVAHAR NVEALAHELH GVVRAAAEVL EAPAPAPPSL AASAFLGDLL ARALRRRLED MATHTGDLLD SMATAAGAVA ERVVALERLF TCRFVFRGRT ASVFAPGEGG PCLGTWRLAD VVDAVGAFRA EVNTHRSDMR ADAGALRGVM AQTTEALREC EALGLQAPVF RTLCADHARL SKLQTSAALT AGRLQAATVL RPVERFLARW DLVSAALRRA VDERGVLALV ATLRETWTEA REEQAPPAPA FTPEELREAA DRVLGDYHEV AGDGEAGPDA VPLSASVNVR DWAAVNLEVL RRGARAPDDA SAGVPLLAQT WVPVDRLLAE VDAVSKGGSG GSWSHPQFEK |
-Experimental information
Beam | Instrument name: Cornell High Energy Synchrotron Source (CHESS) G1 City: Ithaca, NY / 国: USA ![]() | |||||||||||||||||||||||||||||||||
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Detector | Name: Pilatus 200K / Type: Pilatus / Pixsize x: 172 mm | |||||||||||||||||||||||||||||||||
Scan | Measurement date: Jun 3, 2017 / Storage temperature: 4 °C / Cell temperature: 4 °C / Exposure time: 2 sec. / Number of frames: 300 / Unit: 1/A /
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Distance distribution function P(R) |
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Result | Comments: Additional SEC parameters: Column type: Superdex 200 Increase 5/150 GE; Flow rate: 0.3 ml/min; Sample injection concentration: 6 mg/ml; Injection volume: 100 µl. The models displayed in ...Comments: Additional SEC parameters: Column type: Superdex 200 Increase 5/150 GE; Flow rate: 0.3 ml/min; Sample injection concentration: 6 mg/ml; Injection volume: 100 µl. The models displayed in this entry are: Top, individual best-fit DAMMIN model and; Bottom, the bead-occupancy and volume-corrected averaged spatial representation of the protein (DAMFILT model) obtained from ten individual DAMMIN runs (NSD = 0.78; resolution estimate = 4.1 nm).
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