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- SASDEL4: Residues 478-884 of pseudorabies virus tegument protein UL37 -

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Basic information

Entry
Database: SASBDB / ID: SASDEL4
SampleResidues 478-884 of pseudorabies virus tegument protein UL37
  • Tegument protein UL37 (protein), PRV UL37C, Suid alphaherpesvirus 1
Function / homologyHerpesvirus UL37 / Herpesvirus UL37 tegument protein / virion assembly / metal ion binding / UL37
Function and homology information
Biological speciesSuid alphaherpesvirus 1
CitationDate: 2018 Aug 30
Title: The dynamic nature of the conserved tegument protein UL37 of herpesviruses.
Authors: "Koenigsberg A", "Heldwein E"
Contact author
  • Andrea Koenigsberg (Tufts University School of Medicine)

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

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Models

Model #2375
Type: dummy / Radius of dummy atoms: 6.40 A / Symmetry: None / Chi-square value: 1.077 / P-value: 0.372010
Search similar-shape structures of this assembly by Omokage search (details)

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Sample

SampleName: Residues 478-884 of pseudorabies virus tegument protein UL37
Specimen concentration: 6 mg/ml
BufferName: 100 mM HEPES 150 mM NaCl 5% glycerol 0.1 mM tris(2-carboxyethyl)phosphine (TCEP)
pH: 7.5
Entity #1196Name: PRV UL37C / Type: protein / Description: Tegument protein UL37 / Formula weight: 43.456 / Num. of mol.: 1 / Source: Suid alphaherpesvirus 1 / References: UniProt: Q911W0
Sequence: GPGSGLRADG AGETPMEAPT SAALVDLAAA ADLVNYPSMV HLEAMADPSF APFFVVTAVA DAYNCLLTAS YDRRADLAQV LTWARDYGAG LIPNVSGYRT KLAALVAALA REDLTVAHAR NVEALAHELH GVVRAAAEVL EAPAPAPPSL AASAFLGDLL ARALRRRLED ...Sequence:
GPGSGLRADG AGETPMEAPT SAALVDLAAA ADLVNYPSMV HLEAMADPSF APFFVVTAVA DAYNCLLTAS YDRRADLAQV LTWARDYGAG LIPNVSGYRT KLAALVAALA REDLTVAHAR NVEALAHELH GVVRAAAEVL EAPAPAPPSL AASAFLGDLL ARALRRRLED MATHTGDLLD SMATAAGAVA ERVVALERLF TCRFVFRGRT ASVFAPGEGG PCLGTWRLAD VVDAVGAFRA EVNTHRSDMR ADAGALRGVM AQTTEALREC EALGLQAPVF RTLCADHARL SKLQTSAALT AGRLQAATVL RPVERFLARW DLVSAALRRA VDERGVLALV ATLRETWTEA REEQAPPAPA FTPEELREAA DRVLGDYHEV AGDGEAGPDA VPLSASVNVR DWAAVNLEVL R

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Experimental information

BeamInstrument name: Cornell High Energy Synchrotron Source (CHESS) G1
City: Ithaca, NY / 国: USA / Type of source: X-ray synchrotron / Wavelength: 0.125 Å / Dist. spec. to detc.: 1.5 mm
DetectorName: Pilatus 200K / Type: Pilatus / Pixsize x: 172 mm
Scan
Title: PRV UL37C-478-884 / Measurement date: Jun 3, 2017 / Storage temperature: 4 °C / Cell temperature: 4 °C / Exposure time: 2 sec. / Number of frames: 300 / Unit: 1/A /
MinMax
Q0.0074 0.2808
Distance distribution function P(R)
Sofotware P(R): GNOM 5.0 / Number of points: 480 /
MinMax
Q0.007412 0.280191
P(R) point1 480
R0 125
Result
D max: 12.5 / Type of curve: sec /
ExperimentalStandard
MW44 kDa44 kDa

P(R)GuinierGuinier error
Forward scattering, I00.008036 0.0081 7.0E-5
Radius of gyration, Rg3.99 nm3.86 nm0.014

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