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- SASDD52: Arthrospira fluorescence recovery protein AmaxFRP.1-106 -

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Basic information

Entry
Database: SASBDB / ID: SASDD52
SampleArthrospira fluorescence recovery protein AmaxFRP.1-106
  • Uncharacterized fluorescence recovery protein (protein), FRP, Arthrospira maxima CS-328
Function / homologyFluorescence recovery protein / : / Photoprotection regulator fluorescence recovery protein / thylakoid membrane / Fluorescence recovery protein
Function and homology information
Biological speciesArthrospira maxima CS-328 (bacteria)
CitationDate: 2018 Mar
Title: Functional interaction of low-homology FRPs from different cyanobacteria with Synechocystis OCP
Authors: Slonimskiy Y / Maksimov E / Lukashev E / Moldenhauer M / Jeffries C / Svergun D / Friedrich T
Contact author
  • Cy M Jeffries (EMBL-Hamburg, European Molecular Biology Laboratory (EMBL) - Hamburg outstation, Notkestraße 85, Geb. 25A, 22607 Hamburg, Deutschland, Germany)

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

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Models

Model #1707
Type: dummy / Software: (2.3i) / Radius of dummy atoms: 1.90 A / Symmetry: P2 / Chi-square value: 1.08 / P-value: 0.488760
Search similar-shape structures of this assembly by Omokage search (details)
Model #1708
Type: atomic / Symmetry: P2
Comment: Fitted using CRYSOL with 25 harmonics, 25 points and constant adjusment.
Chi-square value: 1.127 / P-value: 0.285306
Search similar-shape structures of this assembly by Omokage search (details)

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Sample

SampleName: Arthrospira fluorescence recovery protein AmaxFRP.1-106
Specimen concentration: 5.77 mg/ml
BufferName: 20 mM Tris-HCl, 150 mM NaCl, 0.1 mM EDTA, 2 mM dithiothreitol, 3 % v/v glycerol
pH: 7.6
Entity #916Name: FRP / Type: protein / Description: Uncharacterized fluorescence recovery protein / Formula weight: 12.244 / Num. of mol.: 2 / Source: Arthrospira maxima CS-328 / References: UniProt: B5W3T4
Sequence:
MSEINWSEQD KNAAVDALHK AYEREVKILI DEVKQKAFNL TEIDEVWKLH DFLSARRHDI DGKYDYRDAA SVFVLATLVK QGWLSLEELQ VLGQDKLAKI SALTRL

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Experimental information

BeamInstrument name: PETRA III P12 / City: Hamburg / 国: Germany / Type of source: X-ray synchrotron / Wavelength: 0.124 Å
DetectorName: Pilatus 2M
Scan
Title: Arthrospira fluorescence recovery protein AmaxFRP.1-106
Measurement date: Sep 1, 2017 / Storage temperature: 10 °C / Cell temperature: 10 °C / Exposure time: 0.05 sec. / Number of frames: 20 / Unit: 1/nm /
MinMax
Q0.0884 3.8857
Distance distribution function P(R)
Sofotware P(R): GNOM 5.0 / Number of points: 1377 /
MinMax
Q0.0884003 3.88565
P(R) point1 1377
R0 9.5
Result
Type of curve: single_conc
Comments: Additional GASBOR models, with spatial alignments and the NSD estimate can be located in the full entry zip archive.
ExperimentalStandardPorod
MW22 kDa22 kDa22 kDa
Volume--35 nm3

P(R)GuinierGuinier error
Forward scattering, I00.01621 0.0161 3.0E-5
Radius of gyration, Rg2.786 nm2.68 nm0.02

MinMax
D-9.5
Guinier point1 144

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