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- PDB-8onh: Variant Surface Glycoprotein VSG11wt-Oil -

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Basic information

Entry
Database: PDB / ID: 8onh
TitleVariant Surface Glycoprotein VSG11wt-Oil
ComponentsVariant surface glycoprotein
KeywordsMEMBRANE PROTEIN / Variant surface glycoprotein Suramin Trypanosomiasis Drug resistance Glycosylation
Function / homologyTrypanosome variant surface glycoprotein, B-type, N-terminal domain / Trypanosomal VSG domain / side of membrane / plasma membrane / alpha-D-glucopyranose / Variant surface glycoprotein
Function and homology information
Biological speciesTrypanosoma brucei brucei (eukaryote)
MethodX-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 2.59 Å
AuthorsZeelen, J.P. / Stebbins, C.E. / Foti, K. / Gkeka, A. / Vlachou, E.P.
Funding support1items
OrganizationGrant numberCountry
Not funded
CitationJournal: Plos Negl Trop Dis / Year: 2023
Title: A structural classification of the variant surface glycoproteins of the African trypanosomey.
Authors: Dakovic, S. / Zeelen, J.P. / Gkeka, A. / Chandra, M. / van Straaten, M. / Foti, K. / Zhong, J. / Vlachou, E.P. / Aresta-Branco, F. / Verdi, J.P. / Papavasiliou, F.N. / Stebbins, C.E.
History
DepositionApr 3, 2023Deposition site: PDBE / Processing site: PDBE
Revision 1.0Sep 13, 2023Provider: repository / Type: Initial release
Revision 1.1Nov 13, 2024Group: Structure summary / Category: pdbx_entry_details / pdbx_modification_feature / Item: _pdbx_entry_details.has_protein_modification

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

Downloads & links

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Assembly

Deposited unit
A: Variant surface glycoprotein
B: Variant surface glycoprotein
C: Variant surface glycoprotein
D: Variant surface glycoprotein
E: Variant surface glycoprotein
F: Variant surface glycoprotein
G: Variant surface glycoprotein
H: Variant surface glycoprotein
I: Variant surface glycoprotein
J: Variant surface glycoprotein
K: Variant surface glycoprotein
L: Variant surface glycoprotein
M: Variant surface glycoprotein
N: Variant surface glycoprotein
O: Variant surface glycoprotein
P: Variant surface glycoprotein
Q: Variant surface glycoprotein
R: Variant surface glycoprotein
hetero molecules


Theoretical massNumber of molelcules
Total (without water)809,34950
Polymers796,35518
Non-polymers12,99432
Water5,116284
1
A: Variant surface glycoprotein
B: Variant surface glycoprotein
C: Variant surface glycoprotein
hetero molecules


Theoretical massNumber of molelcules
Total (without water)135,8379
Polymers132,7263
Non-polymers3,1116
Water543
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area13440 Å2
ΔGint41 kcal/mol
Surface area44660 Å2
MethodPISA
2
D: Variant surface glycoprotein
E: Variant surface glycoprotein
F: Variant surface glycoprotein
hetero molecules


Theoretical massNumber of molelcules
Total (without water)134,0748
Polymers132,7263
Non-polymers1,3485
Water543
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area8300 Å2
ΔGint-4 kcal/mol
Surface area36700 Å2
MethodPISA
3
G: Variant surface glycoprotein
H: Variant surface glycoprotein
I: Variant surface glycoprotein
hetero molecules


Theoretical massNumber of molelcules
Total (without water)135,1708
Polymers132,7263
Non-polymers2,4445
Water0
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area12240 Å2
ΔGint22 kcal/mol
Surface area41470 Å2
MethodPISA
4
J: Variant surface glycoprotein
K: Variant surface glycoprotein
L: Variant surface glycoprotein
hetero molecules


Theoretical massNumber of molelcules
Total (without water)136,1619
Polymers132,7263
Non-polymers3,4356
Water543
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area14170 Å2
ΔGint44 kcal/mol
Surface area44940 Å2
MethodPISA
5
M: Variant surface glycoprotein
N: Variant surface glycoprotein
O: Variant surface glycoprotein
hetero molecules


Theoretical massNumber of molelcules
Total (without water)134,3988
Polymers132,7263
Non-polymers1,6725
Water362
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area9610 Å2
ΔGint7 kcal/mol
Surface area39640 Å2
MethodPISA
6
P: Variant surface glycoprotein
Q: Variant surface glycoprotein
R: Variant surface glycoprotein
hetero molecules


Theoretical massNumber of molelcules
Total (without water)133,7098
Polymers132,7263
Non-polymers9835
Water362
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area7580 Å2
ΔGint-8 kcal/mol
Surface area34550 Å2
MethodPISA
Unit cell
Length a, b, c (Å)131.880, 210.771, 133.754
Angle α, β, γ (deg.)90.000, 104.537, 90.000
Int Tables number4
Space group name H-MP1211
Space group name HallP2yb
Symmetry operation#1: x,y,z
#2: -x,y+1/2,-z

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Components

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Protein / Non-polymers , 2 types, 302 molecules ABCDEFGHIJKLMNOPQR

#10: Water ChemComp-HOH / water


Mass: 18.015 Da / Num. of mol.: 284 / Source method: isolated from a natural source / Formula: H2O
#1: Protein
Variant surface glycoprotein


Mass: 44241.941 Da / Num. of mol.: 18
Source method: isolated from a genetically manipulated source
Source: (gene. exp.) Trypanosoma brucei brucei (eukaryote) / Gene: Tb427.BES126.15 / Production host: Trypanosoma brucei brucei (eukaryote) / References: UniProt: B3GVS7

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Sugars , 8 types, 32 molecules

#2: Polysaccharide alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D- ...alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose


Type: oligosaccharide / Mass: 1072.964 Da / Num. of mol.: 2
Source method: isolated from a genetically manipulated source
DescriptorTypeProgram
DManpa1-2DManpa1-3[DManpa1-6]DManpb1-4DGlcpNAcb1-4DGlcpNAcb1-ROHGlycam Condensed SequenceGMML 1.0
WURCS=2.0/3,6,5/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5]/1-1-2-3-3-3/a4-b1_b4-c1_c3-d1_c6-f1_d2-e1WURCSPDB2Glycan 1.1.0
[][D-1-deoxy-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{[(3+1)][a-D-Manp]{[(2+1)][a-D-Manp]{}}[(6+1)][a-D-Manp]{}}}}LINUCSPDB-CARE
#3: Polysaccharide alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2- ...alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose


Type: oligosaccharide / Mass: 910.823 Da / Num. of mol.: 1
Source method: isolated from a genetically manipulated source
DescriptorTypeProgram
DManpa1-3[DManpa1-6]DManpb1-4DGlcpNAcb1-3DGlcpNAcb1-ROHGlycam Condensed SequenceGMML 1.0
WURCS=2.0/3,5,4/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5]/1-1-2-3-3/a3-b1_b4-c1_c3-d1_c6-e1WURCSPDB2Glycan 1.1.0
[][D-1-deoxy-GlcpNAc]{[(3+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{[(3+1)][a-D-Manp]{}[(6+1)][a-D-Manp]{}}}}LINUCSPDB-CARE
#4: Polysaccharide beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-2-acetamido-2-deoxy-beta- ...beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose


Type: oligosaccharide / Mass: 586.542 Da / Num. of mol.: 1
Source method: isolated from a genetically manipulated source
DescriptorTypeProgram
DManpb1-4DGlcpNAcb1-3DGlcpNAcb1-ROHGlycam Condensed SequenceGMML 1.0
WURCS=2.0/2,3,2/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5]/1-1-2/a3-b1_b4-c1WURCSPDB2Glycan 1.1.0
[][D-1-deoxy-GlcpNAc]{[(3+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{}}}LINUCSPDB-CARE
#5: Polysaccharide beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta- ...beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose


Type: oligosaccharide / Mass: 586.542 Da / Num. of mol.: 3
Source method: isolated from a genetically manipulated source
DescriptorTypeProgram
DManpb1-4DGlcpNAcb1-4DGlcpNAcb1-ROHGlycam Condensed SequenceGMML 1.0
WURCS=2.0/2,3,2/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5]/1-1-2/a4-b1_b4-c1WURCSPDB2Glycan 1.1.0
[][D-1-deoxy-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{}}}LINUCSPDB-CARE
#6: Polysaccharide alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-3)-2-acetamido-2- ...alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose


Type: oligosaccharide / Mass: 910.823 Da / Num. of mol.: 2
Source method: isolated from a genetically manipulated source
DescriptorTypeProgram
DManpa1-3[DManpa1-6]DManpb1-3DGlcpNAcb1-3DGlcpNAcb1-ROHGlycam Condensed SequenceGMML 1.0
WURCS=2.0/3,5,4/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5]/1-1-2-3-3/a3-b1_b3-c1_c3-d1_c6-e1WURCSPDB2Glycan 1.1.0
[][D-1-deoxy-GlcpNAc]{[(3+1)][b-D-GlcpNAc]{[(3+1)][b-D-Manp]{[(3+1)][a-D-Manp]{}[(6+1)][a-D-Manp]{}}}}LINUCSPDB-CARE
#7: Polysaccharide alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2- ...alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose


Type: oligosaccharide / Mass: 910.823 Da / Num. of mol.: 2
Source method: isolated from a genetically manipulated source
DescriptorTypeProgram
DManpa1-3[DManpa1-6]DManpb1-4DGlcpNAcb1-4DGlcpNAcb1-ROHGlycam Condensed SequenceGMML 1.0
WURCS=2.0/3,5,4/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5]/1-1-2-3-3/a4-b1_b4-c1_c3-d1_c6-e1WURCSPDB2Glycan 1.1.0
[][D-1-deoxy-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{[(3+1)][a-D-Manp]{}[(6+1)][a-D-Manp]{}}}}LINUCSPDB-CARE
#8: Sugar
ChemComp-GLC / alpha-D-glucopyranose / alpha-D-glucose / D-glucose / glucose


Type: D-saccharide, alpha linking / Mass: 180.156 Da / Num. of mol.: 17
Source method: isolated from a genetically manipulated source
Formula: C6H12O6 / Feature type: SUBJECT OF INVESTIGATION
IdentifierTypeProgram
DGlcpaCONDENSED IUPAC CARBOHYDRATE SYMBOLGMML 1.0
a-D-glucopyranoseCOMMON NAMEGMML 1.0
a-D-GlcpIUPAC CARBOHYDRATE SYMBOLPDB-CARE 1.0
GlcSNFG CARBOHYDRATE SYMBOLGMML 1.0
#9: Sugar
ChemComp-NAG / 2-acetamido-2-deoxy-beta-D-glucopyranose / N-acetyl-beta-D-glucosamine / 2-acetamido-2-deoxy-beta-D-glucose / 2-acetamido-2-deoxy-D-glucose / 2-acetamido-2-deoxy-glucose / N-ACETYL-D-GLUCOSAMINE


Type: D-saccharide, beta linking / Mass: 221.208 Da / Num. of mol.: 4
Source method: isolated from a genetically manipulated source
Formula: C8H15NO6 / Feature type: SUBJECT OF INVESTIGATION
IdentifierTypeProgram
DGlcpNAcbCONDENSED IUPAC CARBOHYDRATE SYMBOLGMML 1.0
N-acetyl-b-D-glucopyranosamineCOMMON NAMEGMML 1.0
b-D-GlcpNAcIUPAC CARBOHYDRATE SYMBOLPDB-CARE 1.0
GlcNAcSNFG CARBOHYDRATE SYMBOLGMML 1.0

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Details

Has ligand of interestY
Has protein modificationY

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Experimental details

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Experiment

ExperimentMethod: X-RAY DIFFRACTION / Number of used crystals: 1

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Sample preparation

CrystalDensity Matthews: 2.26 Å3/Da / Density % sol: 45.57 %
Crystal growTemperature: 295 K / Method: vapor diffusion, hanging drop / pH: 6 / Details: 19 % (w/v) PEG2000MME 0.2 M NaCl 0.1 M MES/NaOH

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Data collection

DiffractionMean temperature: 100 K / Serial crystal experiment: N
Diffraction sourceSource: SYNCHROTRON / Site: SLS / Beamline: X06DA / Wavelength: 1 Å
DetectorType: DECTRIS PILATUS 2M-F / Detector: PIXEL / Date: Oct 19, 2019
RadiationProtocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M / Scattering type: x-ray
Radiation wavelengthWavelength: 1 Å / Relative weight: 1
ReflectionResolution: 2.59→48.81 Å / Num. obs: 217669 / % possible obs: 99.42 % / Redundancy: 6.8 % / Biso Wilson estimate: 66.93 Å2 / CC1/2: 0.999 / Net I/σ(I): 14.56
Reflection shellResolution: 2.59→2.683 Å / Num. unique obs: 20848 / CC1/2: 0.545

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Processing

Software
NameVersionClassification
PHENIX1.19.2_4158refinement
xia2data reduction
Aimlessdata scaling
PHENIXphasing
Coot0.9.8.7 ELmodel building
RefinementMethod to determine structure: MOLECULAR REPLACEMENT / Resolution: 2.59→48.81 Å / SU ML: 0.4058 / Cross valid method: FREE R-VALUE / σ(F): 1.15 / Phase error: 29.9449
Stereochemistry target values: GeoStd + Monomer Library + CDL v1.2
RfactorNum. reflection% reflection
Rfree0.2695 10882 5 %
Rwork0.2292 409034 -
obs0.2312 217644 99.42 %
Solvent computationShrinkage radii: 0.9 Å / VDW probe radii: 1.11 Å / Solvent model: FLAT BULK SOLVENT MODEL
Displacement parametersBiso mean: 66.92 Å2
Refinement stepCycle: LAST / Resolution: 2.59→48.81 Å
ProteinNucleic acidLigandSolventTotal
Num. atoms42850 0 848 284 43982
Refine LS restraints
Refine-IDTypeDev idealNumber
X-RAY DIFFRACTIONf_bond_d0.003444279
X-RAY DIFFRACTIONf_angle_d0.599160174
X-RAY DIFFRACTIONf_chiral_restr0.04137371
X-RAY DIFFRACTIONf_plane_restr0.00467768
X-RAY DIFFRACTIONf_dihedral_angle_d16.705616098
LS refinement shell
Resolution (Å)Rfactor RfreeNum. reflection RfreeRfactor RworkNum. reflection RworkRefine-ID% reflection obs (%)
2.59-2.620.35145450.36110438X-RAY DIFFRACTION75.57
2.62-2.650.36687160.360413625X-RAY DIFFRACTION99.87
2.65-2.680.36357300.343213840X-RAY DIFFRACTION99.87
2.68-2.710.34737200.325213708X-RAY DIFFRACTION99.8
2.71-2.750.35147330.323513882X-RAY DIFFRACTION99.88
2.75-2.790.33727130.317613700X-RAY DIFFRACTION99.84
2.79-2.830.34817230.305113717X-RAY DIFFRACTION99.85
2.83-2.870.33357280.306213867X-RAY DIFFRACTION99.88
2.87-2.910.33897260.310713774X-RAY DIFFRACTION99.91
2.91-2.960.34747310.307313800X-RAY DIFFRACTION99.88
2.96-3.010.33587180.31413684X-RAY DIFFRACTION99.88
3.01-3.070.34147330.304813864X-RAY DIFFRACTION99.89
3.07-3.130.31537160.279813704X-RAY DIFFRACTION99.88
3.13-3.190.30247300.27613837X-RAY DIFFRACTION99.92
3.19-3.260.32137220.278113663X-RAY DIFFRACTION99.87
3.26-3.330.29497260.265913819X-RAY DIFFRACTION99.78
3.33-3.420.32847200.266313748X-RAY DIFFRACTION99.81
3.42-3.510.31797270.267613772X-RAY DIFFRACTION99.61
3.51-3.610.30537200.248213755X-RAY DIFFRACTION99.69
3.61-3.730.27837200.232713699X-RAY DIFFRACTION99.74
3.73-3.860.26877260.22713760X-RAY DIFFRACTION99.72
3.86-4.020.2657200.217313715X-RAY DIFFRACTION99.3
4.02-4.20.23587140.199613604X-RAY DIFFRACTION99.02
4.2-4.420.22427260.188213780X-RAY DIFFRACTION99.77
4.42-4.70.22257290.186713743X-RAY DIFFRACTION99.68
4.7-5.060.23427300.188213732X-RAY DIFFRACTION99.73
5.06-5.570.28487200.20213763X-RAY DIFFRACTION99.6
5.57-6.370.25597220.208513671X-RAY DIFFRACTION99.09
6.37-8.030.21727180.19213679X-RAY DIFFRACTION99.45
8.03-48.810.21867200.185213691X-RAY DIFFRACTION99.16
Refinement TLS params.

Method: refined / Refine-ID: X-RAY DIFFRACTION

IDL11 (°2)L12 (°2)L13 (°2)L22 (°2)L23 (°2)L33 (°2)S11 (Å °)S12 (Å °)S13 (Å °)S21 (Å °)S22 (Å °)S23 (Å °)S31 (Å °)S32 (Å °)S33 (Å °)T11 (Å2)T12 (Å2)T13 (Å2)T22 (Å2)T23 (Å2)T33 (Å2)Origin x (Å)Origin y (Å)Origin z (Å)
12.574502535610.1696422960510.2829644530543.42935395876-1.728861426972.381710844950.0323050547764-0.11494439278-0.301954232135-0.2933470621640.151367638208-0.3521548167390.75156405382-0.114877625988-0.2834943070920.5468900426710.00408832314622-0.01422206323910.315393006215-0.03114424188440.54742505510246.051-13.6536.775
26.6806908302-1.128804732837.748530917320.552228999362-0.891997006618.427540696990.5389549720510.7034062931770.423226740484-0.359021909476-0.401184191651-0.1394902302010.735695657050.93881503572-0.1129195009910.7697307899760.06309222433640.0817352440530.7319916768040.1362736479120.57506191092530.671-0.0220.711
33.627981935-2.503805740240.356196507513.500973686031.639091648683.406056422180.2392336283080.3951257520440.526778162719-0.2597612366970.0112935400199-0.384902708468-0.4756531016360.338770385781-0.2287123700870.881362233487-0.002029809012020.1122109279810.8561452996580.2301223612620.70099753115622.38715.927-15.335
44.571583188010.0201564434653-0.4830885941444.251075861940.3554554704878.990871535810.1120839795850.748710483454-0.179577907142-0.33368357352-0.3017455248220.258172149101-0.878053463771-1.180013892050.1666311732270.7903763391080.2118137003330.002836437321390.9688061122610.2111548110770.66403353390414.6441.421-16.122
58.93909188511-1.50642008727.717628872230.626144148618-0.2426842364628.46435562612-0.0677646663686-0.09203051229871.19852513067-0.0467022294079-0.29345254132-0.0363204066733-0.357950901491-0.6520317798440.264722470840.7623521741320.018461465733-0.000911902010990.4630212541040.1248292981430.50035211587231.8810.85116.51
62.56843031560.1019018126070.6654710401952.852658410880.12107087282.05330831086-0.0854317205892-0.2457548632990.21459646360.01325209178470.135055119864-0.340862290387-0.1329065527750.112329797067-0.06499124154360.5011252744640.0293007765452-0.02894018088640.300717771516-0.06420468482990.48676003301645.722-4.48439.596
71.46085741790.4402992083632.49092502004-0.158185115630.5018879790736.774453572450.3190241586030.1669080648330.0763612135657-0.194435862687-0.0569611735119-0.1534242377820.764477271512-0.606868916207-0.2665795148030.9505325970570.110490388-0.07467116225930.6131659290410.02053641355860.47441064211425.186-5.2485.508
81.89654011950.08016621281831.375293336853.75368800104-1.730157714295.44187443099-0.211178383412-0.168426949133-0.06004512106720.452439722047-0.07755314448820.1154027174480.260229435207-0.3883498499110.2622158154750.6063605365950.03113811159840.0685710679860.36176515824-0.05354175649240.52567023669743.718-29.57434.095
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1084.354388515980.442789558919-2.431866255834.071795565020.5424286876592.0311966971-0.4496841863660.355259766018-0.228742271075-0.454564731159-0.269289194440.0603449311193-0.224476577885-1.25714926140.8067992209640.5653968478250.0286828176961-0.01890995181310.534633721993-0.03738195427870.62571326604769.39962.75434.49
1091.64530163277-1.065462647892.38317235410.620089271011-1.671365195442.98669008858-0.393280687465-0.333564966165-0.0961550506-0.01579897007670.122692370539-0.5926659520430.01743568224670.2605453238250.3719187573011.385031062030.0384155894095-0.1871397613961.671413805010.3005781714751.1110181995885.89954.80285.382
1103.59907261865-0.0151031230050.4123845565522.485977469780.77233808763.83066561927-0.0356448008978-0.2751838577380.103177749007-0.0167277649689-0.1390150661440.0451060573865-0.548733275757-0.2087484068450.1788299981180.654444687896-0.05144098937150.02054438189440.5332999321630.006625113009180.41895554405371.62171.36639.92
111-0.08314251261450.04398881056170.3933230693110.3856658308380.2605062792191.70317410889-0.208889008136-0.406471228641-0.3457559608820.8333402488910.6898778158870.139509715111-0.369748812139-0.0342738593803-0.4856723473531.059096736960.196060010748-0.0435512995641.215094056780.2177077962110.90312619043186.85857.44763.826
Refinement TLS group
IDRefine-IDRefine TLS-IDSelection detailsAuth asym-IDAuth seq-ID
1X-RAY DIFFRACTION1( CHAIN A AND RESID 24:43 )A24 - 43
2X-RAY DIFFRACTION2( CHAIN A AND RESID 44:70 )A44 - 70
3X-RAY DIFFRACTION3( CHAIN A AND RESID 71:136 )A71 - 136
4X-RAY DIFFRACTION4( CHAIN A AND RESID 137:159 )A137 - 159
5X-RAY DIFFRACTION5( CHAIN A AND RESID 160:185 )A160 - 185
6X-RAY DIFFRACTION6( CHAIN A AND RESID 186:344 )A186 - 344
7X-RAY DIFFRACTION7( CHAIN A AND RESID 345:389 )A345 - 389
8X-RAY DIFFRACTION8( CHAIN B AND RESID 24:43 )B24 - 43
9X-RAY DIFFRACTION9( CHAIN B AND RESID 44:70 )B44 - 70
10X-RAY DIFFRACTION10( CHAIN B AND RESID 71:159 )B71 - 159
11X-RAY DIFFRACTION11( CHAIN B AND RESID 160:185 )B160 - 185
12X-RAY DIFFRACTION12( CHAIN B AND RESID 186:367 )B186 - 367
13X-RAY DIFFRACTION13( CHAIN B AND RESID 368:389 )B368 - 389
14X-RAY DIFFRACTION14( CHAIN C AND RESID 24:43 )C24 - 43
15X-RAY DIFFRACTION15( CHAIN C AND RESID 44:71 )C44 - 71
16X-RAY DIFFRACTION16( CHAIN C AND RESID 72:136 )C72 - 136
17X-RAY DIFFRACTION17( CHAIN C AND RESID 137:172 )C137 - 172
18X-RAY DIFFRACTION18( CHAIN C AND RESID 173:344 )C173 - 344
19X-RAY DIFFRACTION19( CHAIN C AND RESID 345:389 )C345 - 389
20X-RAY DIFFRACTION20( CHAIN D AND RESID 24:43 )D24 - 43
21X-RAY DIFFRACTION21( CHAIN D AND RESID 44:68 )D44 - 68
22X-RAY DIFFRACTION22( CHAIN D AND RESID 69:159 )D69 - 159
23X-RAY DIFFRACTION23( CHAIN D AND RESID 160:185 )D160 - 185
24X-RAY DIFFRACTION24( CHAIN D AND RESID 186:344 )D186 - 344
25X-RAY DIFFRACTION25( CHAIN D AND RESID 345:381 )D345 - 381
26X-RAY DIFFRACTION26( CHAIN E AND RESID 24:43 )E24 - 43
27X-RAY DIFFRACTION27( CHAIN E AND RESID 44:146 )E44 - 146
28X-RAY DIFFRACTION28( CHAIN E AND RESID 147:172 )E147 - 172
29X-RAY DIFFRACTION29( CHAIN E AND RESID 173:313 )E173 - 313
30X-RAY DIFFRACTION30( CHAIN E AND RESID 314:366 )E314 - 366
31X-RAY DIFFRACTION31( CHAIN E AND RESID 367:385 )E367 - 385
32X-RAY DIFFRACTION32( CHAIN F AND RESID 24:43 )F24 - 43
33X-RAY DIFFRACTION33( CHAIN F AND RESID 44:151 )F44 - 151
34X-RAY DIFFRACTION34( CHAIN F AND RESID 152:172 )F152 - 172
35X-RAY DIFFRACTION35( CHAIN F AND RESID 173:300 )F173 - 300
36X-RAY DIFFRACTION36( CHAIN F AND RESID 301:330 )F301 - 330
37X-RAY DIFFRACTION37( CHAIN F AND RESID 331:365 )F331 - 365
38X-RAY DIFFRACTION38( CHAIN F AND RESID 366:381 )F366 - 381
39X-RAY DIFFRACTION39( CHAIN G AND RESID 24:43 )G24 - 43
40X-RAY DIFFRACTION40( CHAIN G AND RESID 44:71 )G44 - 71
41X-RAY DIFFRACTION41( CHAIN G AND RESID 72:136 )G72 - 136
42X-RAY DIFFRACTION42( CHAIN G AND RESID 137:172 )G137 - 172
43X-RAY DIFFRACTION43( CHAIN G AND RESID 173:199 )G173 - 199
44X-RAY DIFFRACTION44( CHAIN G AND RESID 200:286 )G200 - 286
45X-RAY DIFFRACTION45( CHAIN G AND RESID 287:344 )G287 - 344
46X-RAY DIFFRACTION46( CHAIN G AND RESID 345:388 )G345 - 388
47X-RAY DIFFRACTION47( CHAIN H AND RESID 24:57 )H24 - 57
48X-RAY DIFFRACTION48( CHAIN H AND RESID 58:172 )H58 - 172
49X-RAY DIFFRACTION49( CHAIN H AND RESID 173:344 )H173 - 344
50X-RAY DIFFRACTION50( CHAIN H AND RESID 345:386 )H345 - 386
51X-RAY DIFFRACTION51( CHAIN I AND RESID 25:43 )I25 - 43
52X-RAY DIFFRACTION52( CHAIN I AND RESID 44:61 )I44 - 61
53X-RAY DIFFRACTION53( CHAIN I AND RESID 63:136 )I63 - 136
54X-RAY DIFFRACTION54( CHAIN I AND RESID 137:158 )I137 - 158
55X-RAY DIFFRACTION55( CHAIN I AND RESID 159:183 )I159 - 183
56X-RAY DIFFRACTION56( CHAIN I AND RESID 184:246 )I184 - 246
57X-RAY DIFFRACTION57( CHAIN I AND RESID 247:344 )I247 - 344
58X-RAY DIFFRACTION58( CHAIN I AND RESID 345:391 )I345 - 391
59X-RAY DIFFRACTION59( CHAIN J AND RESID 24:70 )J24 - 70
60X-RAY DIFFRACTION60( CHAIN J AND RESID 71:159 )J71 - 159
61X-RAY DIFFRACTION61( CHAIN J AND RESID 160:365 )J160 - 365
62X-RAY DIFFRACTION62( CHAIN J AND RESID 366:389 )J366 - 389
63X-RAY DIFFRACTION63( CHAIN K AND RESID 24:43 )K24 - 43
64X-RAY DIFFRACTION64( CHAIN K AND RESID 44:90 )K44 - 90
65X-RAY DIFFRACTION65( CHAIN K AND RESID 91:136 )K91 - 136
66X-RAY DIFFRACTION66( CHAIN K AND RESID 137:172 )K137 - 172
67X-RAY DIFFRACTION67( CHAIN K AND RESID 173:366 )K173 - 366
68X-RAY DIFFRACTION68( CHAIN K AND RESID 367:389 )K367 - 389
69X-RAY DIFFRACTION69( CHAIN L AND RESID 24:43 )L24 - 43
70X-RAY DIFFRACTION70( CHAIN L AND RESID 44:71 )L44 - 71
71X-RAY DIFFRACTION71( CHAIN L AND RESID 72:102 )L72 - 102
72X-RAY DIFFRACTION72( CHAIN L AND RESID 103:136 )L103 - 136
73X-RAY DIFFRACTION73( CHAIN L AND RESID 137:172 )L137 - 172
74X-RAY DIFFRACTION74( CHAIN L AND RESID 173:233 )L173 - 233
75X-RAY DIFFRACTION75( CHAIN L AND RESID 234:344 )L234 - 344
76X-RAY DIFFRACTION76( CHAIN L AND RESID 345:389 )L345 - 389
77X-RAY DIFFRACTION77( CHAIN M AND RESID 24:43 )M24 - 43
78X-RAY DIFFRACTION78( CHAIN M AND RESID 44:144 )M44 - 144
79X-RAY DIFFRACTION79( CHAIN M AND RESID 145:172 )M145 - 172
80X-RAY DIFFRACTION80( CHAIN M AND RESID 173:213 )M173 - 213
81X-RAY DIFFRACTION81( CHAIN M AND RESID 214:366 )M214 - 366
82X-RAY DIFFRACTION82( CHAIN M AND RESID 367:387 )M367 - 387
83X-RAY DIFFRACTION83( CHAIN N AND RESID 24:43 )N24 - 43
84X-RAY DIFFRACTION84( CHAIN N AND RESID 44:172 )N44 - 172
85X-RAY DIFFRACTION85( CHAIN N AND RESID 173:344 )N173 - 344
86X-RAY DIFFRACTION86( CHAIN N AND RESID 345:381 )N345 - 381
87X-RAY DIFFRACTION87( CHAIN O AND RESID 24:43 )O24 - 43
88X-RAY DIFFRACTION88( CHAIN O AND RESID 44:137 )O44 - 137
89X-RAY DIFFRACTION89( CHAIN O AND RESID 138:159 )O138 - 159
90X-RAY DIFFRACTION90( CHAIN O AND RESID 160:184 )O160 - 184
91X-RAY DIFFRACTION91( CHAIN O AND RESID 185:224 )O185 - 224
92X-RAY DIFFRACTION92( CHAIN O AND RESID 225:266 )O225 - 266
93X-RAY DIFFRACTION93( CHAIN O AND RESID 267:344 )O267 - 344
94X-RAY DIFFRACTION94( CHAIN O AND RESID 345:386 )O345 - 386
95X-RAY DIFFRACTION95( CHAIN P AND RESID 24:43 )P24 - 43
96X-RAY DIFFRACTION96( CHAIN P AND RESID 44:58 )P44 - 58
97X-RAY DIFFRACTION97( CHAIN P AND RESID 59:172 )P59 - 172
98X-RAY DIFFRACTION98( CHAIN P AND RESID 173:199 )P173 - 199
99X-RAY DIFFRACTION99( CHAIN P AND RESID 200:250 )P200 - 250
100X-RAY DIFFRACTION100( CHAIN P AND RESID 251:344 )P251 - 344
101X-RAY DIFFRACTION101( CHAIN P AND RESID 345:380 )P345 - 380
102X-RAY DIFFRACTION102( CHAIN Q AND RESID 24:61 )Q24 - 61
103X-RAY DIFFRACTION103( CHAIN Q AND RESID 62:161 )Q62 - 161
104X-RAY DIFFRACTION104( CHAIN Q AND RESID 162:213 )Q162 - 213
105X-RAY DIFFRACTION105( CHAIN Q AND RESID 214:300 )Q214 - 300
106X-RAY DIFFRACTION106( CHAIN Q AND RESID 301:344 )Q301 - 344
107X-RAY DIFFRACTION107( CHAIN Q AND RESID 345:378 )Q345 - 378
108X-RAY DIFFRACTION108( CHAIN R AND RESID 24:43 )R24 - 43
109X-RAY DIFFRACTION109( CHAIN R AND RESID 44:159 )R44 - 159
110X-RAY DIFFRACTION110( CHAIN R AND RESID 160:346 )R160 - 346
111X-RAY DIFFRACTION111( CHAIN R AND RESID 347:381 )R347 - 381

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