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- PDB-8e3d: ZBTB7A Zinc Finger Domain Bound to DNA Duplex Containing CAST seq... -

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Basic information

Entry
Database: PDB / ID: 8e3d
TitleZBTB7A Zinc Finger Domain Bound to DNA Duplex Containing CAST sequence (#11)
Components
  • DNA (5'-D(*AP*TP*TP*TP*GP*GP*GP*GP*AP*GP*GP*GP*GP*TP*CP*TP*TP*TP*AP*AP*CP*C)-3')
  • DNA (5'-D(P*GP*GP*TP*AP*AP*AP*AP*GP*AP*CP*CP*CP*CP*TP*CP*CP*CP*CP*AP*AP*AP*T)-3')
  • Zinc finger and BTB domain-containing protein 7A
KeywordsDNA BINDING PROTEIN/DNA / gene expression / DNA BINDING PROTEIN-DNA complex / DNA BINDING PROTEIN
Function / homology
Function and homology information


regulation of transcription regulatory region DNA binding / DNA-dependent protein kinase complex / negative regulation of androgen receptor signaling pathway / double-strand break repair via classical nonhomologous end joining / regulation of DNA-binding transcription factor activity / regulation of glycolytic process / nuclear androgen receptor binding / erythrocyte maturation / regulation of alternative mRNA splicing, via spliceosome / histone acetyltransferase binding ...regulation of transcription regulatory region DNA binding / DNA-dependent protein kinase complex / negative regulation of androgen receptor signaling pathway / double-strand break repair via classical nonhomologous end joining / regulation of DNA-binding transcription factor activity / regulation of glycolytic process / nuclear androgen receptor binding / erythrocyte maturation / regulation of alternative mRNA splicing, via spliceosome / histone acetyltransferase binding / SMAD binding / fat cell differentiation / negative regulation of Notch signaling pathway / protein localization to nucleus / B cell differentiation / transcription corepressor binding / negative regulation of transforming growth factor beta receptor signaling pathway / positive regulation of NF-kappaB transcription factor activity / DNA-binding transcription repressor activity, RNA polymerase II-specific / sequence-specific double-stranded DNA binding / site of double-strand break / chromatin organization / regulation of apoptotic process / DNA-binding transcription factor binding / DNA-binding transcription factor activity, RNA polymerase II-specific / RNA polymerase II cis-regulatory region sequence-specific DNA binding / chromatin remodeling / DNA-binding transcription factor activity / negative regulation of DNA-templated transcription / DNA-templated transcription / regulation of transcription by RNA polymerase II / negative regulation of transcription by RNA polymerase II / DNA binding / zinc ion binding / nucleus / cytoplasm
Similarity search - Function
: / BTB/POZ domain / BTB domain profile. / Zinc finger, C2H2 type / Broad-Complex, Tramtrack and Bric a brac / BTB/POZ domain / zinc finger / Zinc finger C2H2 type domain profile. / Zinc finger C2H2 superfamily / Zinc finger C2H2 type domain signature. ...: / BTB/POZ domain / BTB domain profile. / Zinc finger, C2H2 type / Broad-Complex, Tramtrack and Bric a brac / BTB/POZ domain / zinc finger / Zinc finger C2H2 type domain profile. / Zinc finger C2H2 superfamily / Zinc finger C2H2 type domain signature. / SKP1/BTB/POZ domain superfamily / Zinc finger C2H2-type
Similarity search - Domain/homology
DNA / DNA (> 10) / Zinc finger and BTB domain-containing protein 7A
Similarity search - Component
Biological speciesHomo sapiens (human)
MethodX-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 2.62 Å
AuthorsHorton, J.R. / Ren, R. / Cheng, X.
Funding support United States, 2items
OrganizationGrant numberCountry
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)R35GM134744 United States
Cancer Prevention and Research Institute of Texas (CPRIT)RR160029 United States
CitationJournal: J.Biol.Chem. / Year: 2023
Title: Structural basis for transcription factor ZBTB7A recognition of DNA and effects of ZBTB7A somatic mutations that occur in human acute myeloid leukemia.
Authors: Ren, R. / Horton, J.R. / Chen, Q. / Yang, J. / Liu, B. / Huang, Y. / Blumenthal, R.M. / Zhang, X. / Cheng, X.
History
DepositionAug 17, 2022Deposition site: RCSB / Processing site: RCSB
Revision 1.0Feb 8, 2023Provider: repository / Type: Initial release
Revision 1.1Feb 15, 2023Group: Database references / Category: citation / Item: _citation.journal_volume
Revision 1.2Oct 25, 2023Group: Data collection / Refinement description
Category: chem_comp_atom / chem_comp_bond / pdbx_initial_refinement_model

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

Downloads & links

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Assembly

Deposited unit
A: Zinc finger and BTB domain-containing protein 7A
X: DNA (5'-D(*AP*TP*TP*TP*GP*GP*GP*GP*AP*GP*GP*GP*GP*TP*CP*TP*TP*TP*AP*AP*CP*C)-3')
Y: DNA (5'-D(P*GP*GP*TP*AP*AP*AP*AP*GP*AP*CP*CP*CP*CP*TP*CP*CP*CP*CP*AP*AP*AP*T)-3')
B: Zinc finger and BTB domain-containing protein 7A
D: DNA (5'-D(*AP*TP*TP*TP*GP*GP*GP*GP*AP*GP*GP*GP*GP*TP*CP*TP*TP*TP*AP*AP*CP*C)-3')
E: DNA (5'-D(P*GP*GP*TP*AP*AP*AP*AP*GP*AP*CP*CP*CP*CP*TP*CP*CP*CP*CP*AP*AP*AP*T)-3')
F: Zinc finger and BTB domain-containing protein 7A
H: DNA (5'-D(*AP*TP*TP*TP*GP*GP*GP*GP*AP*GP*GP*GP*GP*TP*CP*TP*TP*TP*AP*AP*CP*C)-3')
I: DNA (5'-D(P*GP*GP*TP*AP*AP*AP*AP*GP*AP*CP*CP*CP*CP*TP*CP*CP*CP*CP*AP*AP*AP*T)-3')
hetero molecules


Theoretical massNumber of molelcules
Total (without water)87,90626
Polymers86,8109
Non-polymers1,09517
Water1,36976
1
A: Zinc finger and BTB domain-containing protein 7A
X: DNA (5'-D(*AP*TP*TP*TP*GP*GP*GP*GP*AP*GP*GP*GP*GP*TP*CP*TP*TP*TP*AP*AP*CP*C)-3')
Y: DNA (5'-D(P*GP*GP*TP*AP*AP*AP*AP*GP*AP*CP*CP*CP*CP*TP*CP*CP*CP*CP*AP*AP*AP*T)-3')
hetero molecules


Theoretical massNumber of molelcules
Total (without water)29,38510
Polymers28,9373
Non-polymers4487
Water543
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area6200 Å2
ΔGint-35 kcal/mol
Surface area12970 Å2
MethodPISA
2
B: Zinc finger and BTB domain-containing protein 7A
D: DNA (5'-D(*AP*TP*TP*TP*GP*GP*GP*GP*AP*GP*GP*GP*GP*TP*CP*TP*TP*TP*AP*AP*CP*C)-3')
E: DNA (5'-D(P*GP*GP*TP*AP*AP*AP*AP*GP*AP*CP*CP*CP*CP*TP*CP*CP*CP*CP*AP*AP*AP*T)-3')
hetero molecules


Theoretical massNumber of molelcules
Total (without water)29,3239
Polymers28,9373
Non-polymers3866
Water543
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area5210 Å2
ΔGint-33 kcal/mol
Surface area13530 Å2
MethodPISA
3
F: Zinc finger and BTB domain-containing protein 7A
H: DNA (5'-D(*AP*TP*TP*TP*GP*GP*GP*GP*AP*GP*GP*GP*GP*TP*CP*TP*TP*TP*AP*AP*CP*C)-3')
I: DNA (5'-D(P*GP*GP*TP*AP*AP*AP*AP*GP*AP*CP*CP*CP*CP*TP*CP*CP*CP*CP*AP*AP*AP*T)-3')
hetero molecules


Theoretical massNumber of molelcules
Total (without water)29,1987
Polymers28,9373
Non-polymers2624
Water181
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area4900 Å2
ΔGint-77 kcal/mol
Surface area13790 Å2
MethodPISA
Unit cell
Length a, b, c (Å)196.181, 196.181, 54.964
Angle α, β, γ (deg.)90.000, 90.000, 120.000
Int Tables number168
Space group name H-MP6
Space group name HallP6
Symmetry operation#1: x,y,z
#2: x-y,x,z
#3: y,-x+y,z
#4: -y,x-y,z
#5: -x+y,-x,z
#6: -x,-y,z

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Components

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Protein , 1 types, 3 molecules ABF

#1: Protein Zinc finger and BTB domain-containing protein 7A / Factor binding IST protein 1 / FBI-1 / Factor that binds to inducer of short transcripts protein 1 ...Factor binding IST protein 1 / FBI-1 / Factor that binds to inducer of short transcripts protein 1 / HIV-1 1st-binding protein 1 / Leukemia/lymphoma-related factor / POZ and Krueppel erythroid myeloid ontogenic factor / POK erythroid myeloid ontogenic factor / Pokemon / Pokemon 1 / TTF-I-interacting peptide 21 / TIP21 / Zinc finger protein 857A


Mass: 15424.003 Da / Num. of mol.: 3 / Fragment: zinc finger domain (UNP residues 380-500)
Source method: isolated from a genetically manipulated source
Source: (gene. exp.) Homo sapiens (human) / Gene: ZBTB7A, FBI1, LRF, ZBTB7, ZNF857A / Production host: Escherichia coli BL21(DE3) (bacteria) / Strain (production host): BL21(DE3) / Variant (production host): Gold / References: UniProt: O95365

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DNA chain , 2 types, 6 molecules XDHYEI

#2: DNA chain DNA (5'-D(*AP*TP*TP*TP*GP*GP*GP*GP*AP*GP*GP*GP*GP*TP*CP*TP*TP*TP*AP*AP*CP*C)-3')


Mass: 6838.410 Da / Num. of mol.: 3 / Source method: obtained synthetically / Source: (synth.) Homo sapiens (human)
#3: DNA chain DNA (5'-D(P*GP*GP*TP*AP*AP*AP*AP*GP*AP*CP*CP*CP*CP*TP*CP*CP*CP*CP*AP*AP*AP*T)-3')


Mass: 6674.347 Da / Num. of mol.: 3 / Source method: obtained synthetically / Source: (synth.) Homo sapiens (human)

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Non-polymers , 3 types, 93 molecules

#4: Chemical
ChemComp-EDO / 1,2-ETHANEDIOL / ETHYLENE GLYCOL


Mass: 62.068 Da / Num. of mol.: 5 / Source method: obtained synthetically / Formula: C2H6O2
#5: Chemical
ChemComp-ZN / ZINC ION


Mass: 65.409 Da / Num. of mol.: 12 / Source method: obtained synthetically / Formula: Zn
#6: Water ChemComp-HOH / water


Mass: 18.015 Da / Num. of mol.: 76 / Source method: isolated from a natural source / Formula: H2O

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Details

Has ligand of interestN

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Experimental details

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Experiment

ExperimentMethod: X-RAY DIFFRACTION / Number of used crystals: 1

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Sample preparation

CrystalDensity Matthews: 3.52 Å3/Da / Density % sol: 65.03 %
Crystal growTemperature: 292 K / Method: vapor diffusion, sitting drop / pH: 7 / Details: 20% PEG3350, 0.2M Potassium chloride

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Data collection

DiffractionMean temperature: 100 K / Serial crystal experiment: N
Diffraction sourceSource: SYNCHROTRON / Site: APS / Beamline: 22-ID / Wavelength: 1 Å
DetectorType: DECTRIS EIGER X 16M / Detector: PIXEL / Date: Jun 9, 2022
RadiationProtocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M / Scattering type: x-ray
Radiation wavelengthWavelength: 1 Å / Relative weight: 1
ReflectionResolution: 2.62→46.15 Å / Num. obs: 70633 / % possible obs: 99.5 % / Redundancy: 22.1 % / Biso Wilson estimate: 62.02 Å2 / Rmerge(I) obs: 0.182 / Rpim(I) all: 0.039 / Net I/σ(I): 21.7
Reflection shellResolution: 2.62→2.71 Å / Redundancy: 19.1 % / Mean I/σ(I) obs: 1 / Num. unique obs: 7054 / CC1/2: 0.398 / CC star: 0.755 / Rpim(I) all: 0.706 / % possible all: 100

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Processing

Software
NameVersionClassification
PHENIX1.20.1_4487refinement
SERGUIdata collection
HKL-2000data reduction
HKL-2000data scaling
PHENIXphasing
RefinementMethod to determine structure: MOLECULAR REPLACEMENT
Starting model: 7N5U

7n5u


Resolution: 2.62→46.15 Å / SU ML: 0.4612 / Cross valid method: FREE R-VALUE / σ(F): 1.34 / Phase error: 28.1704
Stereochemistry target values: GeoStd + Monomer Library + CDL v1.2
RfactorNum. reflection% reflection
Rfree0.2374 3492 4.97 %
Rwork0.2058 66839 -
obs0.2074 70331 98.82 %
Solvent computationShrinkage radii: 0.9 Å / VDW probe radii: 1.1 Å / Solvent model: FLAT BULK SOLVENT MODEL
Displacement parametersBiso mean: 105.16 Å2
Refinement stepCycle: LAST / Resolution: 2.62→46.15 Å
ProteinNucleic acidLigandSolventTotal
Num. atoms2620 2697 32 76 5425
Refine LS restraints
Refine-IDTypeDev idealNumber
X-RAY DIFFRACTIONf_bond_d0.00365722
X-RAY DIFFRACTIONf_angle_d0.6298269
X-RAY DIFFRACTIONf_chiral_restr0.0388897
X-RAY DIFFRACTIONf_plane_restr0.0035605
X-RAY DIFFRACTIONf_dihedral_angle_d28.32262306
LS refinement shell
Resolution (Å)Rfactor RfreeNum. reflection RfreeRfactor RworkNum. reflection RworkRefine-ID% reflection obs (%)
2.62-2.650.55211300.52521X-RAY DIFFRACTION96.82
2.65-2.690.48981370.45242665X-RAY DIFFRACTION98.25
2.69-2.730.40381390.36512747X-RAY DIFFRACTION99.11
2.73-2.780.33941390.35722650X-RAY DIFFRACTION98.17
2.78-2.820.41091430.35172655X-RAY DIFFRACTION99.01
2.82-2.870.3711390.34332695X-RAY DIFFRACTION98.78
2.87-2.920.381370.33632586X-RAY DIFFRACTION96.02
2.92-2.980.34611440.35212691X-RAY DIFFRACTION99.4
2.98-3.040.43971400.33552710X-RAY DIFFRACTION99.72
3.04-3.10.28331440.26592678X-RAY DIFFRACTION99.58
3.1-3.180.2261420.20062696X-RAY DIFFRACTION99.79
3.18-3.260.21891420.17982714X-RAY DIFFRACTION99.69
3.26-3.340.22791430.21072696X-RAY DIFFRACTION99.86
3.34-3.440.24091330.20922733X-RAY DIFFRACTION99.79
3.44-3.550.24661360.20352663X-RAY DIFFRACTION99.93
3.55-3.680.23381460.20472745X-RAY DIFFRACTION99.9
3.68-3.830.23211380.19482674X-RAY DIFFRACTION99.82
3.83-40.2341480.19182729X-RAY DIFFRACTION99.93
4-4.210.19771380.18092643X-RAY DIFFRACTION97.68
4.21-4.480.20711340.16992666X-RAY DIFFRACTION99.04
4.48-4.820.2241400.16662705X-RAY DIFFRACTION99.72
4.82-5.310.19661400.1772686X-RAY DIFFRACTION99.61
5.31-6.070.1691430.16382709X-RAY DIFFRACTION99.13
6.07-7.640.19981420.18422666X-RAY DIFFRACTION98.98
7.65-46.150.16931350.13682516X-RAY DIFFRACTION92.66
Refinement TLS params.

Method: refined / Refine-ID: X-RAY DIFFRACTION

IDL11 (°2)L12 (°2)L13 (°2)L22 (°2)L23 (°2)L33 (°2)S11 (Å °)S12 (Å °)S13 (Å °)S21 (Å °)S22 (Å °)S23 (Å °)S31 (Å °)S32 (Å °)S33 (Å °)T11 (Å2)T12 (Å2)T13 (Å2)T22 (Å2)T23 (Å2)T33 (Å2)Origin x (Å)Origin y (Å)Origin z (Å)
14.082912122741.315125921943.961215450946.895654167530.3516740636343.995676253930.480536068118-0.426399090406-0.6141901416130.7747316204030.025316387729-0.2406125308591.239685141760.361507112364-0.6849673569430.6802345962620.0262203281268-0.06267756209720.49639462063-0.03787429379840.47172258880236.1523677518-96.3700460844-3.83904962146
24.07129327436-1.862923085070.3748566548683.58162565671-0.2058921481950.22810800094-0.02543791704670.040244043278-0.1250990747580.12869720991-0.09413955710310.4552174775990.194677381904-0.2859372985590.07499334098810.443150944566-0.06828074747280.1312615935440.508984833731-0.0130786720110.26012863472925.1882190004-79.7706000751-10.3611586086
38.377289038730.6483774401381.094230835716.471951894820.03397553749661.05979294363-0.0926676524351-0.2236483590580.6089212287450.22923970021-0.01515390724610.3678262348240.176452575668-0.08001823332770.1337640456010.496696309918-0.09964517688990.08224049483630.4599342973940.04192506336050.2295867815643.2896468659-62.4569280967-11.0419235635
47.101247959395.290609488844.910180344944.636295083872.382347279155.75568233027-0.2215347389341.49241311585-1.17934461617-0.7421171297940.609792350375-1.497443735131.028048536360.301068562112-0.2556743566410.826564277962-0.03394361382460.2165102795830.66072981727-0.05094432120530.37770642060951.8806808398-76.2000228846-19.9471323231
50.8810951997870.6213986936511.477613808631.185475473350.3415432651223.11508346347-0.2976862533960.781663215066-0.150904508074-0.8626798622470.230306204576-0.2298251192280.6047753516810.4863652942140.349420297431.12406833998-0.1448110171830.2212668083371.10779428540.1386819808910.098082243741248.8241333843-68.9156465894-29.5242473943
62.784050008183.72668323145-2.195997499945.64417719501-2.887200312022.01253599696-0.4804834136540.9433361641840.430405603733-0.5385133615220.8758173037450.2161231348430.24277442838-0.135549783844-0.1435114788210.67187209753-0.152626521990.07064121984520.711933518990.1605070376630.41095495004534.2985435359-72.8663267527-18.6512270197
72.703255881910.242033811879-1.017396752682.60131833494-0.1873319054525.217982475910.265097219829-0.5734260818740.03285342389920.629599281694-0.09979209004320.5113010404450.527356511461-0.286286484785-0.01087933130950.806151787508-0.155252338650.01973110459980.7335789011340.01202934710690.24862189775136.4471679838-81.0938670406-2.09882905444
82.9480625130.6069866712-1.475079406981.43034306643-1.534226318442.02080084492-0.0136995604767-0.626792015108-0.1307003433810.6097639236380.09287853069920.6381470213030.646031604143-0.673375463643-0.2463016410771.38790723213-0.3995863903250.5214205495491.27278317376-0.03766222071460.49878565038120.7100765094-82.061297644510.0351524302
98.985099861013.67373840762-0.1073797476374.799435175863.234880947033.75828135850.161247445374-0.7935501697850.9361349568040.475724498485-0.3200630481080.306765114153-0.03668357901560.0246122973709-0.2737047880951.35022534728-0.01954311796150.530926563581.540174887760.008586550719580.70852045035723.2546158544-85.191330982516.7428385257
104.018450062930.928356604421-1.168340936520.8496029686660.6214110755951.57563378849-0.1805412039040.3655146901960.350863151537-0.3240076793220.3985709014450.2304089283320.387892846415-0.00428022957565-0.1441111354630.805341761594-0.1200933524050.08631131629260.692198473672-0.008266454716040.30137572413536.8438425074-73.6434370808-14.8285200196
117.4234416082-1.434054594391.054568051796.64110167135-0.6795943688460.2975583128030.0492676518589-0.06500622425640.134371109811-0.0793453449255-0.0114711611336-0.398822453196-0.1098711106750.0605040128041-0.08128210271420.498171785341-0.09936919830150.116698046930.4638255801390.02539432739980.21770367160962.5632068197-57.5697413512-65.4225650409
126.118440906493.512442990962.349325101748.33487615815-0.06674611628574.4097523952-0.2722417138930.294743471985-0.870808480731-0.081198974724-0.00526463202364-0.01007420241760.1232393829640.2215411814580.327836569270.680844788009-0.08479096116380.2241971575860.461483209515-0.04945426143770.6417091768362.4737554757-32.7283126987-64.2478529048
135.5952109252-5.71226617257-5.6493319499.204111544626.640956732128.261830436550.482597282233-0.3257469619911.267686515610.6152199924850.549288712218-1.191205282290.4944469803940.183965137238-0.9024012644780.902353280256-0.03288500777220.112836294820.4667440138690.1170434705910.54381492734481.8279679435-31.2937218201-66.975736904
149.417491027816.399529581924.725726537615.54337228413.223158118073.47180927881-0.1562122785671.05985602417-0.893102404515-1.679308646310.635204051588-2.920170687910.57685467390.771210649451-0.3477180791020.9378027085280.04263630475910.3106593295990.5943843718070.04578915055990.88500420943585.7582311378-40.0977189731-72.3050230397
151.451012307511.27374612823-2.572572306953.88615219348-3.179067258644.887605133080.3220122849390.387820611818-0.335757428497-1.21478385755-0.375627971022-0.09018935228810.9246945897840.0863997316342-0.0191280112321.18633965985-0.06872726824080.07458173715710.7848713728430.1920297643520.50738996757274.5178111799-39.576997804-78.3996919977
168.152872459972.76821246591-4.822941064313.66760499535-2.535999020363.149441415180.196307930127-0.9932154203290.2418908750310.934855607180.02812450982540.4252576417310.647284322593-0.382011418965-0.2082205279041.05878809482-0.2676114810890.1783284839210.9358356037350.09286376130070.40503295749361.5637012029-55.8509457063-51.4177178158
170.3803235046220.160023494263-0.06433998286330.657940471123-1.413052862373.283070934150.0747163629691-0.4425069211910.06226088013850.269232574594-0.365243788062-0.01910487455090.73131277580.6788968561160.8933559919021.43427312653-0.5605652428770.5864563965891.743409369120.1641406883860.61818993838357.7850398479-60.4507096321-39.3865595477
182.988212323211.64380382178-0.9800610515744.4175890296-1.801642692876.105371259240.474748199959-1.087128156480.02083656550870.573461488569-0.4334533882420.2244553543580.5415126191280.433206827450.07779003199150.790095696503-0.2051879475290.1309270968310.7516197710970.1549290612260.53765350475859.7257276004-53.8018395628-55.434944022
196.86462291584-0.826357119394-2.728117531634.19064754444-3.088153530294.23749135266-0.0075875774619-0.4878644110390.064990718767-0.7485037456730.1568883295230.3103386224630.7671755005670.6503195060630.3096663623920.973964887429-0.2655358487840.2681665207360.620377623990.00307268944850.64451444432173.7388558813-45.2125452993-65.5034116753
203.39278155334-0.415634645219-0.5475369128536.58186040151-4.68062806843.78750317372-0.08803555795660.660694448230.084716070395-1.32432966933-0.5316379564640.1000613018521.01121999250.1312781921150.2016016830011.43355232704-0.08409900310650.1715051938780.9317750725430.06717614869480.41117833151374.1502465227-37.2633215297-83.5844710325
215.24373965885-0.139369761469-2.390491631882.475468414723.643357484136.543262206930.388810307813-0.6118148889881.39078854910.4938677934870.0711839882596-0.102999837274-0.9471653134290.856742083204-0.3647329944820.903427652355-0.155302496879-0.02184188926630.813774631557-0.1870632693111.2763257274618.6623007813-51.3581180681-3.90336907625
225.282224358324.136894068242.034586703473.236603875431.602063069250.9862278955330.910919950384-1.628952723374.051003718460.156666867263-0.5496830426860.310777619819-2.67648869831-0.491154979216-0.5067312686242.546510543370.1479829376350.4556110050911.9698174619-0.3057548664672.994553919337.0603862599-30.52463299445.61234993889
234.02847463779-4.81835556561-0.1727135559376.065760450371.431241487215.022835178890.38393942789-1.232697350050.678651216019-0.870119014835-0.5954081883582.2167526982-1.77559722099-2.18619856730.1611903587481.589784471240.3422873024790.1069540124012.09287878789-0.4396752470752.30698686504-10.2290903094-44.5896963993.25850980429
244.81805850578-6.15480493918-5.635632562397.875135421197.229902938866.636790165890.614105810111-2.689470887791.451071901380.01090918351830.780631364068-0.9658823204170.1872424751391.20268706426-1.39000646171.67181972024-0.1731281564370.3311965006862.23690232468-0.486215576621.77734426626-0.656011110328-45.899156852812.1142248126
256.58079936057-2.0737431747-2.063374733832.52796316494-0.3457462905051.177097344240.8697721268590.1660100376783.08233649422-0.983725684027-0.3763549437831.00672142917-2.233469513270.699830273-0.5036828734851.592249562060.05852680378820.3443174557040.7914450508420.01556266772632.038862319359.39230846744-45.7863564754-9.95570901827
261.406717230050.788723130224-1.411516098930.455263617416-0.7930222081311.430334616161.5507697165-0.1422886851581.37661887103-0.765518932570.0431917134086-0.2413603554080.0986023516864-0.0200610500875-1.599314985982.31676685405-0.2171229985250.1467877020311.656437894090.4474475655012.3257675923527.5204952071-38.1498846188-20.7297048231
272.602642107081.67627390713-2.08878183293.1899250421-0.4916056117892.96204939521-1.574808463960.8957135654951.01674482959-5.357876633442.494658445210.7143884182921.161678207121.26407990371-0.817803303823.03841484186-0.4870878649460.9723838707712.426070674620.7255429726062.5948963202124.2638271736-38.3170262625-28.151243406
282.52192626269-3.636708236562.275094339577.4671078161-7.162682814598.964567671941.66773640004-0.266877973751.872686432210.344015926301-0.1907880677031.62799013141-0.7098409122880.494932523432-1.474356123631.99656556293-0.07042617364640.5908581893621.26299973733-0.1866599880342.1155971109520.1625871783-41.8370550953-11.2079763948
295.28752000033-3.943186701431.184028221748.094664107963.781838366684.485023394460.301189816319-2.284261300912.407028290481.035995208480.4313464821870.110450134067-0.291659703361-0.421589019482-0.6740346546831.478163950910.01435813801260.4731799354981.72939698253-0.734930565432.219604711390.265305115176-45.55988586719.96106957319
Refinement TLS group

Refine-ID: X-RAY DIFFRACTION

IDRefine TLS-IDSelection detailsAuth asym-IDLabel asym-IDAuth seq-IDLabel seq-ID
11chain 'A' and (resid 381 through 390 )AA381 - 3901 - 10
22chain 'A' and (resid 391 through 433 )AA391 - 43311 - 53
33chain 'A' and (resid 434 through 477 )AA434 - 47754 - 97
44chain 'A' and (resid 478 through 491 )AA478 - 49198 - 111
55chain 'X' and (resid 1 through 5 )XG1 - 5
66chain 'X' and (resid 6 through 10 )XG6 - 10
77chain 'X' and (resid 11 through 15 )XG11 - 15
88chain 'X' and (resid 16 through 22 )XG16 - 22
99chain 'Y' and (resid 1 through 5 )YH1 - 5
1010chain 'Y' and (resid 6 through 22 )YH6 - 22
1111chain 'B' and (resid 378 through 433 )BK378 - 4331 - 56
1212chain 'B' and (resid 434 through 459 )BK434 - 45957 - 82
1313chain 'B' and (resid 460 through 477 )BK460 - 47783 - 100
1414chain 'B' and (resid 478 through 491 )BK478 - 491101 - 114
1515chain 'D' and (resid 1 through 10 )DQ1 - 10
1616chain 'D' and (resid 11 through 22 )DQ11 - 22
1717chain 'E' and (resid 1 through 5 )ES1 - 5
1818chain 'E' and (resid 6 through 10 )ES6 - 10
1919chain 'E' and (resid 11 through 15 )ES11 - 15
2020chain 'E' and (resid 16 through 22 )ES16 - 22
2121chain 'F' and (resid 381 through 432 )FT381 - 4321 - 52
2222chain 'F' and (resid 433 through 465 )FT433 - 46553 - 85
2323chain 'F' and (resid 466 through 491 )FT466 - 49186 - 111
2424chain 'H' and (resid 1 through 10 )HY1 - 10
2525chain 'H' and (resid 11 through 15 )HY11 - 15
2626chain 'H' and (resid 16 through 22 )HY16 - 22
2727chain 'I' and (resid 1 through 5 )IZ1 - 5
2828chain 'I' and (resid 6 through 10 )IZ6 - 10
2929chain 'I' and (resid 11 through 22 )IZ11 - 22

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