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Yorodumi- PDB-7w7b: Heme exporter HrtBA in complex with protoporphyrin IX containing ... -
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Open data
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Basic information
| Entry | Database: PDB / ID: 7w7b | |||||||||||||||
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| Title | Heme exporter HrtBA in complex with protoporphyrin IX containing manganese(III), high resolution data | |||||||||||||||
Components | (Putative ABC transport ...) x 2 | |||||||||||||||
Keywords | MEMBRANE PROTEIN / Heme efflux / Heme extraction / Heme detoxification / ABC transporter / 4-Helix TMD / ATP-BINDING PROTEIN-MEMBRANE PROTEIN complex | |||||||||||||||
| Function / homology | Function and homology informationtransmembrane transporter activity / ATP hydrolysis activity / ATP binding / metal ion binding / plasma membrane Similarity search - Function | |||||||||||||||
| Biological species | Corynebacterium diphtheriae NCTC 13129 (bacteria) | |||||||||||||||
| Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 3 Å | |||||||||||||||
Authors | Hisano, T. / Nakamura, H. / Rahman, M.M. / Tosha, T. / Shirouzu, M. / Shiro, Y. | |||||||||||||||
| Funding support | Japan, 4items
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Citation | Journal: Proc.Natl.Acad.Sci.USA / Year: 2022Title: Structural basis for heme detoxification by an ATP-binding cassette-type efflux pump in gram-positive pathogenic bacteria. Authors: Nakamura, H. / Hisano, T. / Rahman, M.M. / Tosha, T. / Shirouzu, M. / Shiro, Y. | |||||||||||||||
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Structure visualization
| Structure viewer | Molecule: Molmil Jmol/JSmol |
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Downloads & links
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Download
| PDBx/mmCIF format | 7w7b.cif.gz | 1.2 MB | Display | PDBx/mmCIF format |
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| PDB format | pdb7w7b.ent.gz | 1 MB | Display | PDB format |
| PDBx/mmJSON format | 7w7b.json.gz | Tree view | PDBx/mmJSON format | |
| Others | Other downloads |
-Validation report
| Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/w7/7w7b ftp://data.pdbj.org/pub/pdb/validation_reports/w7/7w7b | HTTPS FTP |
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-Related structure data
| Related structure data | ![]() 7w78C ![]() 7w79C ![]() 7w7aC ![]() 7w7cC ![]() 7w7dC ![]() 6llj S: Starting model for refinement C: citing same article ( |
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| Similar structure data | Similarity search - Function & homology F&H Search |
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Assembly
| Deposited unit | ![]()
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| 1 | ![]()
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| 2 | ![]()
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| 3 | ![]()
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| Unit cell |
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| Noncrystallographic symmetry (NCS) | NCS domain:
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About Yorodumi



Corynebacterium diphtheriae NCTC 13129 (bacteria)
X-RAY DIFFRACTION
Japan, 4items
Citation





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