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- PDB-7w2g: An open-like conformation of the sigma-1 receptor from Xenopus la... -

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Basic information

Entry
Database: PDB / ID: 7w2g
TitleAn open-like conformation of the sigma-1 receptor from Xenopus laevis complexed with PRE084 by soaking
ComponentsSigma non-opioid intracellular receptor 1
KeywordsMEMBRANE PROTEIN / sigma receptor / membrane receptor / S1R / ligand entry
Function / homology
Function and homology information


nuclear outer membrane / nuclear inner membrane / lipid transport / cytoplasmic vesicle / endoplasmic reticulum membrane / membrane
Similarity search - Function
ERG2/sigma1 receptor-like / ERG2 and Sigma1 receptor like protein
Similarity search - Domain/homology
Chem-E84 / Sigma non-opioid intracellular receptor 1
Similarity search - Component
Biological speciesXenopus laevis (African clawed frog)
MethodX-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / molecular replacement / Resolution: 2.851 Å
AuthorsMeng, F. / Sun, Z. / Zhou, X.
Funding support China, 1items
OrganizationGrant numberCountry
National Natural Science Foundation of China (NSFC)31770783 China
CitationJournal: Nat Commun / Year: 2022
Title: An open-like conformation of the sigma-1 receptor reveals its ligand entry pathway.
Authors: Meng, F. / Xiao, Y. / Ji, Y. / Sun, Z. / Zhou, X.
History
DepositionNov 23, 2021Deposition site: PDBJ / Processing site: PDBJ
Revision 1.0Mar 16, 2022Provider: repository / Type: Initial release
Revision 1.1Mar 23, 2022Group: Database references / Category: citation / citation_author
Item: _citation.journal_volume / _citation.page_first ..._citation.journal_volume / _citation.page_first / _citation.page_last / _citation.pdbx_database_id_PubMed / _citation_author.identifier_ORCID
Revision 1.2Nov 29, 2023Group: Data collection / Refinement description
Category: chem_comp_atom / chem_comp_bond ...chem_comp_atom / chem_comp_bond / pdbx_initial_refinement_model / struct_ncs_dom_lim
Item: _struct_ncs_dom_lim.beg_auth_comp_id / _struct_ncs_dom_lim.beg_label_asym_id ..._struct_ncs_dom_lim.beg_auth_comp_id / _struct_ncs_dom_lim.beg_label_asym_id / _struct_ncs_dom_lim.beg_label_comp_id / _struct_ncs_dom_lim.beg_label_seq_id / _struct_ncs_dom_lim.end_auth_comp_id / _struct_ncs_dom_lim.end_label_asym_id / _struct_ncs_dom_lim.end_label_comp_id / _struct_ncs_dom_lim.end_label_seq_id

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

Downloads & links

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Assembly

Deposited unit
A: Sigma non-opioid intracellular receptor 1
B: Sigma non-opioid intracellular receptor 1
C: Sigma non-opioid intracellular receptor 1
D: Sigma non-opioid intracellular receptor 1
E: Sigma non-opioid intracellular receptor 1
F: Sigma non-opioid intracellular receptor 1
G: Sigma non-opioid intracellular receptor 1
H: Sigma non-opioid intracellular receptor 1
I: Sigma non-opioid intracellular receptor 1
J: Sigma non-opioid intracellular receptor 1
K: Sigma non-opioid intracellular receptor 1
L: Sigma non-opioid intracellular receptor 1
hetero molecules


Theoretical massNumber of molelcules
Total (without water)307,31631
Polymers301,46012
Non-polymers5,85619
Water3,279182
1
A: Sigma non-opioid intracellular receptor 1
B: Sigma non-opioid intracellular receptor 1
C: Sigma non-opioid intracellular receptor 1
hetero molecules


Theoretical massNumber of molelcules
Total (without water)76,6107
Polymers75,3653
Non-polymers1,2454
Water543
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area6330 Å2
ΔGint-28 kcal/mol
Surface area28840 Å2
MethodPISA
2
D: Sigma non-opioid intracellular receptor 1
E: Sigma non-opioid intracellular receptor 1
F: Sigma non-opioid intracellular receptor 1
hetero molecules


Theoretical massNumber of molelcules
Total (without water)76,6107
Polymers75,3653
Non-polymers1,2454
Water543
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area6320 Å2
ΔGint-29 kcal/mol
Surface area28840 Å2
MethodPISA
3
G: Sigma non-opioid intracellular receptor 1
H: Sigma non-opioid intracellular receptor 1
I: Sigma non-opioid intracellular receptor 1
hetero molecules


Theoretical massNumber of molelcules
Total (without water)77,1949
Polymers75,3653
Non-polymers1,8296
Water543
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area7460 Å2
ΔGint-17 kcal/mol
Surface area28470 Å2
MethodPISA
4
J: Sigma non-opioid intracellular receptor 1
K: Sigma non-opioid intracellular receptor 1
L: Sigma non-opioid intracellular receptor 1
hetero molecules


Theoretical massNumber of molelcules
Total (without water)76,9028
Polymers75,3653
Non-polymers1,5375
Water543
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area6890 Å2
ΔGint-21 kcal/mol
Surface area28510 Å2
MethodPISA
Unit cell
Length a, b, c (Å)135.042, 161.019, 201.944
Angle α, β, γ (deg.)90.000, 90.000, 90.000
Int Tables number19
Space group name H-MP212121
Noncrystallographic symmetry (NCS)NCS domain:
IDEns-IDDetails
11(chain A and (resid 8 through 202 or resid 204 through 301))
21(chain B and (resid 8 through 202 or resid 204 through 301))
31(chain C and (resid 8 through 202 or resid 204 through 301))
41(chain D and (resid 8 through 202 or resid 204 through 301))
51(chain E and (resid 8 through 202 or resid 204 through 301))
61(chain F and (resid 8 through 202 or resid 204 through 301))
71(chain G and (resid 8 through 202 or resid 204 through 301))
81(chain H and (resid 8 through 202 or resid 204 through 301))
91(chain I and (resid 8 through 202 or resid 204 through 301))
101(chain J and (resid 8 through 202 or resid 204 through 301))
111(chain K and (resid 8 through 202 or resid 204 through 301))
121(chain L and (resid 8 through 202 or resid 204 through 301))

NCS domain segments:

Ens-ID: 1

Dom-IDComponent-IDBeg auth comp-IDBeg label comp-IDEnd auth comp-IDEnd label comp-IDSelection detailsAuth asym-IDLabel asym-IDAuth seq-IDLabel seq-ID
11ARGARGVALVAL(chain A and (resid 8 through 202 or resid 204 through 301))AA8 - 20212 - 206
12SERSERE84E84(chain A and (resid 8 through 202 or resid 204 through 301))AA - M204 - 301208
21ARGARGVALVAL(chain B and (resid 8 through 202 or resid 204 through 301))BB8 - 20212 - 206
22SERSERE84E84(chain B and (resid 8 through 202 or resid 204 through 301))BB - N204 - 301208
31ARGARGVALVAL(chain C and (resid 8 through 202 or resid 204 through 301))CC8 - 20212 - 206
32SERSERE84E84(chain C and (resid 8 through 202 or resid 204 through 301))CC - P204 - 301208
41ARGARGVALVAL(chain D and (resid 8 through 202 or resid 204 through 301))DD8 - 20212 - 206
42SERSERE84E84(chain D and (resid 8 through 202 or resid 204 through 301))DD - Q204 - 301208
51ARGARGVALVAL(chain E and (resid 8 through 202 or resid 204 through 301))EE8 - 20212 - 206
52SERSERE84E84(chain E and (resid 8 through 202 or resid 204 through 301))EE - R204 - 301208
61ARGARGVALVAL(chain F and (resid 8 through 202 or resid 204 through 301))FF8 - 20212 - 206
62SERSERE84E84(chain F and (resid 8 through 202 or resid 204 through 301))FF - T204 - 301208
71ARGARGVALVAL(chain G and (resid 8 through 202 or resid 204 through 301))GG8 - 20212 - 206
72SERSERE84E84(chain G and (resid 8 through 202 or resid 204 through 301))GG - U204 - 301208
81ARGARGVALVAL(chain H and (resid 8 through 202 or resid 204 through 301))HH8 - 20212 - 206
82SERSERE84E84(chain H and (resid 8 through 202 or resid 204 through 301))HH - W204 - 301208
91ARGARGVALVAL(chain I and (resid 8 through 202 or resid 204 through 301))II8 - 20212 - 206
92SERSERE84E84(chain I and (resid 8 through 202 or resid 204 through 301))II - Y204 - 301208
101ARGARGVALVAL(chain J and (resid 8 through 202 or resid 204 through 301))JJ8 - 20212 - 206
102SERSERE84E84(chain J and (resid 8 through 202 or resid 204 through 301))JJ - AA204 - 301208
111ARGARGVALVAL(chain K and (resid 8 through 202 or resid 204 through 301))KK8 - 20212 - 206
112SERSERE84E84(chain K and (resid 8 through 202 or resid 204 through 301))KK - CA204 - 301208
121ARGARGVALVAL(chain L and (resid 8 through 202 or resid 204 through 301))LL8 - 20212 - 206
122SERSERE84E84(chain L and (resid 8 through 202 or resid 204 through 301))LL - EA204 - 301208

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Components

#1: Protein
Sigma non-opioid intracellular receptor 1 / Sigma 1-type opioid receptor / Sigma1-receptor / Sigma1R


Mass: 25121.682 Da / Num. of mol.: 12
Source method: isolated from a genetically manipulated source
Source: (gene. exp.) Xenopus laevis (African clawed frog) / Gene: sigmar1, oprs1 / Production host: Komagataella pastoris (fungus) / References: UniProt: Q6DCU6
#2: Chemical
ChemComp-E84 / 2-morpholin-4-ylethyl 1-phenylcyclohexane-1-carboxylate / PRE-084 / PRE-084


Mass: 317.423 Da / Num. of mol.: 12 / Source method: obtained synthetically / Formula: C19H27NO3 / Feature type: SUBJECT OF INVESTIGATION / Comment: antidepressant, agonist*YM
#3: Sugar
ChemComp-BOG / octyl beta-D-glucopyranoside / Beta-Octylglucoside / octyl beta-D-glucoside / octyl D-glucoside / octyl glucoside / Octyl glucoside


Type: D-saccharide / Mass: 292.369 Da / Num. of mol.: 7 / Source method: obtained synthetically / Formula: C14H28O6 / Comment: detergent*YM
IdentifierTypeProgram
b-octylglucosideIUPAC CARBOHYDRATE SYMBOLPDB-CARE 1.0
#4: Water ChemComp-HOH / water / Water


Mass: 18.015 Da / Num. of mol.: 182 / Source method: isolated from a natural source / Formula: H2O
Has ligand of interestY

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Experimental details

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Experiment

ExperimentMethod: X-RAY DIFFRACTION / Number of used crystals: 1

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Sample preparation

CrystalDensity Matthews: 3.64 Å3/Da / Density % sol: 66.22 %
Crystal growTemperature: 293.15 K / Method: vapor diffusion, sitting drop / pH: 6.5
Details: 0.1M Na+-HEPES pH 6.5, 28% PEG 300, 0.4mM PRE084 soaking

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Data collection

DiffractionMean temperature: 100 K / Serial crystal experiment: N
Diffraction sourceSource: SYNCHROTRON / Site: SSRF / Beamline: BL19U1 / Wavelength: 0.9785 Å
DetectorType: DECTRIS PILATUS3 6M / Detector: PIXEL / Date: Oct 25, 2021
RadiationProtocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M / Scattering type: x-ray
Radiation wavelengthWavelength: 0.9785 Å / Relative weight: 1
ReflectionResolution: 2.851→48.423 Å / Num. obs: 102980 / % possible obs: 99.9 % / Redundancy: 11.2 % / Biso Wilson estimate: 69.84 Å2 / CC1/2: 0.999 / Rmerge(I) obs: 0.134 / Rpim(I) all: 0.041 / Rrim(I) all: 0.14 / Net I/σ(I): 13.3 / Num. measured all: 1151095
Reflection shell

Diffraction-ID: 1

Resolution (Å)Redundancy (%)Rmerge(I) obsNum. measured allNum. unique obsCC1/2Rpim(I) allRrim(I) allNet I/σ(I) obs% possible all
2.851-2.911.61.5055925151020.8080.4571.5741.8100
7.729-48.423100.03154280542210.010.0334399.1

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Phasing

PhasingMethod: molecular replacement

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Processing

Software
NameVersionClassification
XDS20210323data reduction
Aimless0.7.4data scaling
PHASERphasing
PHENIX1.13_2998refinement
PDB_EXTRACT3.27data extraction
RefinementMethod to determine structure: MOLECULAR REPLACEMENT
Starting model: 5HK1
Resolution: 2.851→47.671 Å / SU ML: 0.39 / Cross valid method: THROUGHOUT / σ(F): 1.34 / Phase error: 35.51 / Stereochemistry target values: ML
RfactorNum. reflection% reflection
Rfree0.283 5134 5 %
Rwork0.2536 97579 -
obs0.2551 102713 99.64 %
Solvent computationShrinkage radii: 0.9 Å / VDW probe radii: 1.11 Å / Solvent model: FLAT BULK SOLVENT MODEL
Displacement parametersBiso max: 170.22 Å2 / Biso mean: 76.8882 Å2 / Biso min: 34.89 Å2
Refinement stepCycle: final / Resolution: 2.851→47.671 Å
ProteinNucleic acidLigandSolventTotal
Num. atoms20200 0 416 182 20798
Biso mean--82.54 63.23 -
Num. residues----2564
Refine LS restraints NCS
Ens-IDDom-IDAuth asym-IDNumberRefine-IDRmsType
11A12125X-RAY DIFFRACTION7.749TORSIONAL
12B12125X-RAY DIFFRACTION7.749TORSIONAL
13C12125X-RAY DIFFRACTION7.749TORSIONAL
14D12125X-RAY DIFFRACTION7.749TORSIONAL
15E12125X-RAY DIFFRACTION7.749TORSIONAL
16F12125X-RAY DIFFRACTION7.749TORSIONAL
17G12125X-RAY DIFFRACTION7.749TORSIONAL
18H12125X-RAY DIFFRACTION7.749TORSIONAL
19I12125X-RAY DIFFRACTION7.749TORSIONAL
110J12125X-RAY DIFFRACTION7.749TORSIONAL
111K12125X-RAY DIFFRACTION7.749TORSIONAL
112L12125X-RAY DIFFRACTION7.749TORSIONAL
LS refinement shell

Refine-ID: X-RAY DIFFRACTION / Rfactor Rfree error: 0

Resolution (Å)Rfactor RfreeNum. reflection RfreeRfactor RworkNum. reflection Rwork% reflection obs (%)
2.8512-2.88360.40081720.33093252100
2.8836-2.91750.34561550.33233229100
2.9175-2.95310.36281700.33723189100
2.9531-2.99050.3841690.32673256100
2.9905-3.02980.34971650.30993209100
3.0298-3.07130.35321590.29953242100
3.0713-3.11520.33271680.29293231100
3.1152-3.16170.33461830.29433220100
3.1617-3.21110.32441570.29543235100
3.2111-3.26370.33511720.29293202100
3.2637-3.320.34082080.29133210100
3.32-3.38030.35391740.2713252100
3.3803-3.44530.30261510.26183250100
3.4453-3.51560.3241650.26273231100
3.5156-3.5920.27321780.25743235100
3.592-3.67560.25631510.24443258100
3.6756-3.76750.30911590.23853252100
3.7675-3.86930.30471750.24483234100
3.8693-3.98310.27451830.24113262100
3.9831-4.11160.24221880.22823253100
4.1116-4.25840.26221590.21653243100
4.2584-4.42880.23921450.2133276100
4.4288-4.63020.23021710.2088326799
4.6302-4.87410.25321660.20973275100
4.8741-5.17910.26351800.21573297100
5.1791-5.57850.27351960.24963238100
5.5785-6.13880.27731750.27113332100
6.1388-7.02470.2841720.27283302100
7.0247-8.84110.23241870.23763342100
8.8411-47.6710.27771810.283330594
Refinement TLS params.

Method: refined / Refine-ID: X-RAY DIFFRACTION

IDL112)L122)L132)L222)L232)L332)S11 (Å °)S12 (Å °)S13 (Å °)S21 (Å °)S22 (Å °)S23 (Å °)S31 (Å °)S32 (Å °)S33 (Å °)T112)T122)T132)T222)T232)T332)Origin x (Å)Origin y (Å)Origin z (Å)
14.8988-1.056-1.27475.5878-0.41133.96710.1736-1.00830.60150.95120.1464-0.4835-0.33110.3643-0.24250.64840.0738-0.10720.5757-0.15560.7422-69.574644.426787.3881
22.7034-0.58640.34193.508-0.9282.80710.11230.09890.58960.3173-0.0226-0.3563-0.48920.54730.01840.486-0.05-0.13240.473-0.10270.7562-67.022239.621275.8854
31.58330.15160.82884.90940.25312.5911-0.3407-0.36090.42320.83220.0135-0.7041-0.01220.38740.23810.4530.0259-0.15190.5524-0.08240.5945-67.790524.596686.3432
40.6317-0.1641-0.89782.010.68451.4276-0.562-1.5794-0.41020.64670.3824-0.47750.70660.3241-0.00190.54860.1763-0.16120.7519-0.20760.6988-63.836128.686689.7241
51.7392-1.0806-0.6410.6612-0.13741.61560.10730.12040.63080.02350.2233-0.6403-0.08860.2709-0.21480.3989-0.10130.0280.6074-0.09170.7294-62.64635.979473.5598
66.19031.2990.75860.26110.24880.13281.0471-0.4731-0.99260.6984-0.6714-0.3477-0.50941.0333-0.351.1538-0.381-0.13331.0553-0.0330.3842-15.9168-11.232151.3337
72.3624-0.25030.36766.8791-1.70822.6882-0.1113-0.7585-0.36410.55660.12220.29060.0608-0.12510.03990.4218-0.03210.03030.64540.09440.5699-38.5039-35.134441.5051
81.5890.922-2.31132.6181-0.9583.08830.043-0.33120.0177-0.0720.1052-0.34760.08340.2037-0.13720.3747-0.01840.02090.5190.03840.4287-29.6597-28.653931.8462
92.22040.4858-1.13671.81310.62860.9841-0.0007-0.63740.14380.6406-0.0850.3017-0.08660.26540.00330.56210.04410.12730.5298-0.06940.4412-39.9103-18.29642.4515
100.7120.9177-0.79981.43480.17146.0482-1.1831-0.66940.0968-0.0570.38470.5723-0.3981-1.54290.6780.91290.50580.06231.1517-0.1551.1709-62.5217-1.680135.3365
115.6443-2.09981.81242.8621-1.01574.07530.52190.1972-0.0135-0.7892-0.06280.6679-0.0905-0.428-0.46270.773-0.0146-0.16830.64510.16620.5962-55.374-10.50373.6983
122.1588-1.50060.20942.2201-0.70783.07230.0113-0.2216-0.1978-0.49330.02130.3910.0523-0.4399-0.0140.4481-0.0468-0.03220.41560.01630.411-48.2783-15.477516.0878
132.589-0.5128-1.03472.62360.84524.22110.54730.78861.4654-1.297-0.51020.3359-0.3617-0.33210.00180.83230.0694-0.0140.40690.08970.6452-51.11363.59429.4529
143.9943-1.47150.17234.7155-1.39413.6233-0.37330.0740.4722-0.66310.0503-0.14540.6890.08870.31540.8073-0.13690.03660.44580.00830.8075-23.911216.336910.3477
151.96240.1989-0.71644.93790.20071.2337-0.04170.35130.1753-1.19860.05-0.64070.217-0.17870.04490.9219-0.02350.38910.75960.21910.8113-7.3319-16.79444.8789
161.60631.3988-0.79323.7436-1.62312.53590.1435-0.20880.17260.0992-0.3786-0.9644-0.33180.510.14660.5427-0.06070.21940.72630.15040.8204-11.9593-13.654216.3338
172.2387-1.85020.59432.4965-0.76912.14470.50420.11710.746-0.9133-0.5728-0.5563-0.61920.28190.08230.7729-0.05230.23310.4470.10080.7443-25.2069-14.5818.3436
182.2432-0.01210.16311.9038-0.83521.86510.2450.49730.4229-0.8953-0.0464-0.93260.49180.0717-0.08970.85160.03680.20190.50060.00530.4913-24.4152-15.05715.3606
190.8305-0.8916-0.10782.0074-0.55172.43280.3061-0.31910.2263-0.1336-0.441-0.8193-0.6240.51520.0710.6026-0.17540.11290.4982-0.03830.7898-13.4538-6.568422.1438
206.91130.9624-0.76838.1141-1.88921.15140.6713-0.08440.89671.0515-0.0258-0.2209-0.3966-1.7272-0.28841.0093-0.2911-0.00620.91820.00290.5934-51.274749.063751.3391
215.2427-0.1071-0.03928.9245-1.74222.2206-0.6113-0.58320.08380.3767-0.10970.12560.2359-0.56780.79710.6175-0.0790.06240.6249-0.13570.726-36.172776.27542.5026
222.97761.8430.72574.9933-1.40621.98180.3482-0.010.76720.41170.6917-0.4482-0.28820.4513-0.88960.44210.016-0.02320.6021-0.0880.6972-25.015378.028640.5467
232.72460.5221-1.13073.37820.31694.70880.1633-0.2612-0.2380.19410.3141-0.4467-0.17790.8153-0.32440.53280.031-0.03870.565-0.09520.5976-27.322465.247639.3482
241.32310.25770.69835.04161.22623.55720.1456-0.20280.183-0.3751-0.03950.444-0.1704-0.2483-0.0620.5317-0.0025-0.06590.5095-0.04620.5849-40.086167.307629.7168
252.66821.3750.33492.6862-0.07931.2799-0.0534-0.2079-0.05770.91660.0229-0.3222-0.03630.0277-0.04420.75560.0884-0.14180.44060.05980.4759-27.408356.40642.2652
260.24060.1574-0.040.09280.46352.0064-1.22550.4963-0.3838-0.0173-0.8291-0.19470.01081.31251.77990.90430.51320.07551.29410.111.2226-4.778139.896735.212
273.8059-0.13020.33242.51380.48763.35770.3620.4501-0.0602-0.77130.0603-0.5053-0.00510.7428-0.42051.09180.13310.16650.9056-0.24220.6994-13.525748.31095.2523
281.399-0.44330.29241.53250.13144.0610.09260.0339-0.0838-0.69610.0813-0.41580.11970.6211-0.19910.7320.10570.06430.5728-0.1050.7239-19.526255.378217.1438
291.9466-0.87751.05873.4434-1.98133.99370.84870.8738-1.1566-1.7271-0.87350.12110.27960.36080.10251.13280.19660.03390.648-0.18990.7015-16.185334.66039.2316
302.7993-1.6117-1.53635.43840.57222.0864-0.31960.4116-0.2336-0.5458-0.01310.6527-0.6922-0.58690.45230.9034-0.1227-0.09780.4599-0.14520.8245-43.35921.801210.2609
312.20220.5815-0.30893.74010.74461.7250.29770.3667-0.2051-0.5953-0.32610.88570.196-0.28340.13490.890.089-0.36440.7283-0.24680.9965-57.703253.086410.684
322.9973-1.6144-0.3582.80151.9923.25660.2420.3408-0.626-1.2168-0.53520.90430.35380.03840.19811.07350.1133-0.22960.6746-0.2090.7347-40.352453.40556.116
332.69971.12130.23080.9103-0.02481.39260.5724-0.1102-0.553-1.3338-0.75730.4024-0.1408-0.22830.09921.17260.2166-0.25930.7267-0.12790.7708-45.829152.01086.8904
341.0710.3795-1.5152.1843-0.77882.23770.280.0762-0.0166-0.47360.11650.70210.4043-0.3975-0.34010.783-0.0766-0.27420.61640.02280.9759-53.87544.475322.0901
350.68970.47431.29253.59241.46892.4376-0.36281.11010.1318-0.5940.2424-1.3132-0.10530.8594-0.25210.7636-0.2384-0.13141.0049-0.4696-0.3117-0.40493.264440.8187
363.7151-0.0295-2.24093.35950.50615.30070.03090.166-0.0629-0.56290.05890.0398-0.07110.5166-0.10690.4969-0.0435-0.03690.46370.02340.35822.221625.759952.4706
372.3311.3875-1.46141.92580.01772.2716-0.05860.1424-0.2788-0.04530.10890.0297-0.0835-0.1284-0.04710.39490.02480.00930.508-0.02470.406612.896817.582661.1805
381.8742-0.274-1.73373.16231.17864.6513-0.33490.8977-0.137-0.4075-0.18820.2925-0.6377-0.21860.44550.51270.1182-0.16170.94760.17560.58768.692129.716544.9518
390.4391-0.07980.53570.54160.39968.7716-0.1291-0.0710.4714-0.1451-0.8682-0.051-1.9328-0.58120.95510.83020.4005-0.17891.0310.04971.091-12.858148.372857.5327
401.56170.622-0.20222.8856-0.18413.31770.1619-0.30260.47340.53470.10360.5486-0.6046-0.1626-0.27250.71570.04330.27650.64-0.02420.6787-5.809740.049386.8955
412.10130.9088-1.59262.01630.3783.550.24210.34930.20160.1841-0.08880.3346-0.69740.1883-0.10540.560.02210.11660.5567-0.05740.65164.280534.915875.9777
420.1336-0.0645-0.33870.32471.30679.21980.589-0.1460.4301-0.25770.35050.0278-0.7255-0.224-0.99420.6910.02250.05840.4558-0.0840.584913.907136.979575.7674
433.0819-1.0227-0.29233.0430.66432.61690.57390.28840.18760.069-0.33240.343-0.96980.3514-0.30080.62390.0380.14610.6824-0.0090.63212.089437.534677.2244
440.6072-0.62670.64824.8475-0.07370.868-0.0420.0032-0.16480.42070.63742.36960.027-0.2487-0.46120.48580.04360.12830.73820.17490.911-9.150726.698971.5214
453.6644-1.44620.73074.57210.67364.1847-0.5095-0.8810.06640.21930.39030.97-0.6834-0.98580.08180.47450.20040.14480.9193-0.02360.8518-19.179637.060782.1295
463.2878-3.3899-1.01034.06251.20280.5749-0.2319-0.9851-0.68350.2840.0140.73160.60530.30650.06340.5477-0.16310.17720.9690.03821.0879-29.47087.939280.5821
472.4108-0.620.66563.03640.1052.8146-0.0181-0.2331-0.15120.32840.12090.37220.3971-0.3184-0.08750.78850.00650.15890.73650.22070.89672.0983-6.34387.2421
483.5401-0.0094-1.36431.12620.13194.498-0.16430.2835-0.7462-0.14770.14950.35020.8613-0.58120.08070.5493-0.05130.16510.59920.07850.867-0.4176-1.616975.6844
493.5065-0.9434-0.92753.1420.83082.9404-0.1655-0.5351-0.4620.59240.1150.55710.2226-0.31580.04540.56230.00270.19180.66840.13420.60990.235113.40886.0601
502.6061.79231.14033.75980.34962.9922-0.0753-1.0561-0.09190.19080.01960.71860.07010.10040.06570.51430.02060.11120.75020.19960.7234-0.87117.952985.1071
510.48720.0669-0.67751.4698-2.18713.72790.61290.11920.55060.15620.74140.92660.2054-0.1574-1.36060.4626-0.10130.00850.70170.09140.7415-6.262210.89568.665
523.51451.3033-0.19147.873-1.84483.26170.052-0.0172-1.46480.62040.22690.2610.3415-0.8013-0.2330.5458-0.17510.01340.7216-0.09091.0606-7.6745-7.005269.7443
530.0245-0.34820.07674.79660.10991.5755-0.31450.4984-0.0401-0.38030.38661.8679-0.0707-1.04640.01530.8787-0.30010.04351.15850.1907-0.1326-66.84334.590741.061
544.741.84030.27796.6281-1.31015.9021-0.06770.35370.0898-0.16280.16570.22080.0093-0.1369-0.10260.5026-0.0538-0.020.5884-0.01480.4217-93.420914.726652.4272
552.2581.1031-0.00245.1457-1.5583.72690.03180.2365-0.0958-0.417-0.0443-0.15660.2346-0.13220.08920.31960.02050.00290.4244-0.03520.3302-81.457110.793754.1593
564.78151.84272.61526.85440.83292.5033-0.36330.53180.1754-1.0555-0.0614-0.58020.38260.00650.56940.67540.15970.00670.6766-0.13610.3924-75.985522.182663.5684
571.94412.48781.45614.42822.67853.10750.0468-0.24550.6207-0.4725-0.31810.6798-0.314-0.5730.15540.3719-0.0097-0.00970.50280.03870.5269-86.318425.549666.6693
584.33511.4712-0.54073.48380.34593.8527-0.00490.14050.97250.03620.46660.6622-0.6635-0.0224-0.4840.40890.07380.01680.5254-0.01360.6568-82.156324.645564.0498
591.96730.61040.870.884-0.50390.6937-0.16950.2307-0.3706-0.23720.1638-0.14550.05540.12390.00710.48910.0295-0.00290.5345-0.13960.4751-74.223116.858457.8694
602.5846-0.74912.30214.254-0.54175.3629-0.23090.37330.13740.00360.3222-0.19030.68260.3601-0.19550.52630.05560.12230.8472-0.20540.4143-76.00328.222745.1851
610.3235-0.2683-0.52190.44741.25493.7426-0.05930.3902-0.47210.1715-0.1378-0.34431.2842-0.27240.1820.79070.35850.07680.8837-0.0660.9904-54.3923-10.23557.8599
624.6877-0.153-0.49493.6403-0.21084.24010.2146-0.6668-0.6940.50970.0175-0.3440.5363-0.1354-0.30960.9113-0.0332-0.28760.62140.02670.5928-64.9788-7.044489.9536
632.55021.0138-1.08743.75460.26762.83480.1301-0.3048-0.28910.2860.0449-0.3880.12550.3787-0.16540.61580.0663-0.20410.5459-0.1140.5457-58.71412.682584.5554
641.86560.67942.1862.7718-1.04715.26120.17290.48150.04980.0723-0.0719-0.29880.8087-0.1373-0.13410.43620.0447-0.08220.4392-0.05860.5219-71.80783.111976.218
651.4415-0.7162.35341.6573-2.56955.41490.48640.0497-0.68950.11190.2043-0.19650.43280.5968-0.57710.7476-0.0799-0.0740.4914-0.08040.521-77.3976-0.837574.4061
660.90880.96410.47241.21050.41883.00390.2390.00680.00480.13880.1467-0.16610.41360.153-0.29690.44820.1056-0.1550.4982-0.10040.6617-63.85756.666276.1193
673.2174-0.0436-1.0655.4996-0.14794.4865-0.3795-0.9506-0.28780.19930.3711-0.87510.6040.22490.07050.42220.0655-0.14770.7348-0.06690.659-48.35340.962282.4974
685.1662-4.94161.72274.9568-1.58672.4302-0.8091-1.29510.04480.0240.5131-0.4107-0.8249-0.82350.13820.4018-0.1611-0.1291.0219-0.06361.1059-37.774330.012880.8081
Refinement TLS group
IDRefine-IDRefine TLS-IDSelection detailsAuth asym-IDAuth seq-ID
1X-RAY DIFFRACTION1chain 'L' and (resid 29 through 65 )L29 - 65
2X-RAY DIFFRACTION2chain 'L' and (resid 66 through 106 )L66 - 106
3X-RAY DIFFRACTION3chain 'L' and (resid 107 through 144 )L107 - 144
4X-RAY DIFFRACTION4chain 'L' and (resid 145 through 156 )L145 - 156
5X-RAY DIFFRACTION5chain 'L' and (resid 157 through 219 )L157 - 219
6X-RAY DIFFRACTION6chain 'A' and (resid 6 through 28 )A6 - 28
7X-RAY DIFFRACTION7chain 'A' and (resid 29 through 85 )A29 - 85
8X-RAY DIFFRACTION8chain 'A' and (resid 86 through 174 )A86 - 174
9X-RAY DIFFRACTION9chain 'A' and (resid 175 through 219 )A175 - 219
10X-RAY DIFFRACTION10chain 'B' and (resid 7 through 28 )B7 - 28
11X-RAY DIFFRACTION11chain 'B' and (resid 29 through 85 )B29 - 85
12X-RAY DIFFRACTION12chain 'B' and (resid 86 through 192 )B86 - 192
13X-RAY DIFFRACTION13chain 'B' and (resid 193 through 219 )B193 - 219
14X-RAY DIFFRACTION14chain 'C' and (resid 4 through 28 )C4 - 28
15X-RAY DIFFRACTION15chain 'C' and (resid 29 through 65 )C29 - 65
16X-RAY DIFFRACTION16chain 'C' and (resid 66 through 106 )C66 - 106
17X-RAY DIFFRACTION17chain 'C' and (resid 107 through 134 )C107 - 134
18X-RAY DIFFRACTION18chain 'C' and (resid 135 through 174 )C135 - 174
19X-RAY DIFFRACTION19chain 'C' and (resid 175 through 219 )C175 - 219
20X-RAY DIFFRACTION20chain 'D' and (resid 6 through 28 )D6 - 28
21X-RAY DIFFRACTION21chain 'D' and (resid 29 through 50 )D29 - 50
22X-RAY DIFFRACTION22chain 'D' and (resid 51 through 65 )D51 - 65
23X-RAY DIFFRACTION23chain 'D' and (resid 66 through 106 )D66 - 106
24X-RAY DIFFRACTION24chain 'D' and (resid 107 through 174 )D107 - 174
25X-RAY DIFFRACTION25chain 'D' and (resid 175 through 219 )D175 - 219
26X-RAY DIFFRACTION26chain 'E' and (resid 7 through 28 )E7 - 28
27X-RAY DIFFRACTION27chain 'E' and (resid 29 through 106 )E29 - 106
28X-RAY DIFFRACTION28chain 'E' and (resid 107 through 192 )E107 - 192
29X-RAY DIFFRACTION29chain 'E' and (resid 193 through 219 )E193 - 219
30X-RAY DIFFRACTION30chain 'F' and (resid 4 through 28 )F4 - 28
31X-RAY DIFFRACTION31chain 'F' and (resid 29 through 106 )F29 - 106
32X-RAY DIFFRACTION32chain 'F' and (resid 107 through 144 )F107 - 144
33X-RAY DIFFRACTION33chain 'F' and (resid 145 through 174 )F145 - 174
34X-RAY DIFFRACTION34chain 'F' and (resid 175 through 219 )F175 - 219
35X-RAY DIFFRACTION35chain 'G' and (resid 7 through 28 )G7 - 28
36X-RAY DIFFRACTION36chain 'G' and (resid 29 through 85 )G29 - 85
37X-RAY DIFFRACTION37chain 'G' and (resid 86 through 192 )G86 - 192
38X-RAY DIFFRACTION38chain 'G' and (resid 193 through 219 )G193 - 219
39X-RAY DIFFRACTION39chain 'H' and (resid 8 through 28 )H8 - 28
40X-RAY DIFFRACTION40chain 'H' and (resid 29 through 106 )H29 - 106
41X-RAY DIFFRACTION41chain 'H' and (resid 107 through 134 )H107 - 134
42X-RAY DIFFRACTION42chain 'H' and (resid 135 through 147 )H135 - 147
43X-RAY DIFFRACTION43chain 'H' and (resid 148 through 174 )H148 - 174
44X-RAY DIFFRACTION44chain 'H' and (resid 175 through 192 )H175 - 192
45X-RAY DIFFRACTION45chain 'H' and (resid 193 through 219 )H193 - 219
46X-RAY DIFFRACTION46chain 'I' and (resid 6 through 28 )I6 - 28
47X-RAY DIFFRACTION47chain 'I' and (resid 29 through 65 )I29 - 65
48X-RAY DIFFRACTION48chain 'I' and (resid 66 through 106 )I66 - 106
49X-RAY DIFFRACTION49chain 'I' and (resid 107 through 144 )I107 - 144
50X-RAY DIFFRACTION50chain 'I' and (resid 145 through 174 )I145 - 174
51X-RAY DIFFRACTION51chain 'I' and (resid 175 through 192 )I175 - 192
52X-RAY DIFFRACTION52chain 'I' and (resid 193 through 219 )I193 - 219
53X-RAY DIFFRACTION53chain 'J' and (resid 7 through 28 )J7 - 28
54X-RAY DIFFRACTION54chain 'J' and (resid 29 through 65 )J29 - 65
55X-RAY DIFFRACTION55chain 'J' and (resid 66 through 106 )J66 - 106
56X-RAY DIFFRACTION56chain 'J' and (resid 107 through 118 )J107 - 118
57X-RAY DIFFRACTION57chain 'J' and (resid 119 through 147 )J119 - 147
58X-RAY DIFFRACTION58chain 'J' and (resid 148 through 164 )J148 - 164
59X-RAY DIFFRACTION59chain 'J' and (resid 165 through 192 )J165 - 192
60X-RAY DIFFRACTION60chain 'J' and (resid 193 through 219 )J193 - 219
61X-RAY DIFFRACTION61chain 'K' and (resid 8 through 28 )K8 - 28
62X-RAY DIFFRACTION62chain 'K' and (resid 29 through 65 )K29 - 65
63X-RAY DIFFRACTION63chain 'K' and (resid 66 through 106 )K66 - 106
64X-RAY DIFFRACTION64chain 'K' and (resid 107 through 134 )K107 - 134
65X-RAY DIFFRACTION65chain 'K' and (resid 135 through 156 )K135 - 156
66X-RAY DIFFRACTION66chain 'K' and (resid 157 through 192 )K157 - 192
67X-RAY DIFFRACTION67chain 'K' and (resid 193 through 219 )K193 - 219
68X-RAY DIFFRACTION68chain 'L' and (resid 6 through 28 )L6 - 28

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