Entry | Database: PDB / ID: 7qno |
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Title | Crystal structure of ligand-free Danio rerio HDAC6 CD1 CD2 |
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Components | Histone deacetylase 6 |
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Keywords | TRANSPORT PROTEIN / Deacetylase / Histone / Microtuble |
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Function / homology | Function and homology information
Aggrephagy / tubulin deacetylase activity / swimming behavior / definitive hemopoiesis / protein lysine deacetylase activity / regulation of tubulin deacetylation / histone deacetylase activity / potassium ion binding / histone deacetylase complex / hematopoietic progenitor cell differentiation ...Aggrephagy / tubulin deacetylase activity / swimming behavior / definitive hemopoiesis / protein lysine deacetylase activity / regulation of tubulin deacetylation / histone deacetylase activity / potassium ion binding / histone deacetylase complex / hematopoietic progenitor cell differentiation / angiogenesis / negative regulation of transcription by RNA polymerase II / zinc ion bindingSimilarity search - Function Ubiquitin Carboxyl-terminal Hydrolase-like zinc finger / Zinc finger, UBP-type / Zn-finger in ubiquitin-hydrolases and other protein / Zinc finger UBP-type profile. / Histone deacetylase family / Histone deacetylase domain / Histone deacetylase domain superfamily / Histone deacetylase domain / Ureohydrolase domain superfamily / Zinc finger, RING/FYVE/PHD-typeSimilarity search - Domain/homology |
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Biological species | ![](img/tx_fish.gif) Danio rerio (zebrafish) |
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Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 2.38 Å |
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Authors | Kempf, G. / Langousis, G. / Sanchez, J. / Matthias, P. |
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Funding support | 1items Organization | Grant number | Country |
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Other private | | |
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Citation | Journal: Methods Mol.Biol. / Year: 2023 Title: Expression and Crystallization of HDAC6 Tandem Catalytic Domains. Authors: Langousis, G. / Sanchez, J. / Kempf, G. / Matthias, P. |
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History | Deposition | Dec 21, 2021 | Deposition site: PDBE / Processing site: PDBE |
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Revision 1.0 | Feb 9, 2022 | Provider: repository / Type: Initial release |
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Revision 1.1 | Nov 23, 2022 | Group: Database references / Refinement description / Category: citation / software Item: _citation.country / _citation.journal_abbrev ..._citation.country / _citation.journal_abbrev / _citation.journal_id_CSD / _citation.journal_id_ISSN / _citation.journal_volume / _citation.page_first / _citation.page_last / _citation.pdbx_database_id_DOI / _citation.pdbx_database_id_PubMed / _citation.title / _citation.year |
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Revision 1.2 | Jan 31, 2024 | Group: Data collection / Refinement description Category: chem_comp_atom / chem_comp_bond / pdbx_initial_refinement_model |
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