[English] 日本語
Yorodumi- PDB-7pl0: Crystal structure of a DyP-type peroxidase 5G5 variant from Bacil... -
+Open data
-Basic information
Entry | Database: PDB / ID: 7pl0 | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Title | Crystal structure of a DyP-type peroxidase 5G5 variant from Bacillus subtilis | ||||||||||||
Components | Deferrochelatase/peroxidase | ||||||||||||
Keywords | OXIDOREDUCTASE / Dye-decolorizing Peroxidase / Bacillus subtilis / Directed evolution / high-throughput screening / phenolic compounds | ||||||||||||
Function / homology | Function and homology information iron import into cell / Oxidoreductases; Acting on a peroxide as acceptor; Peroxidases / peroxidase activity / heme binding / metal ion binding Similarity search - Function | ||||||||||||
Biological species | Bacillus subtilis (bacteria) | ||||||||||||
Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 2.1 Å | ||||||||||||
Authors | Borges, P.T. / Rodrigues, C. / Silva, D. / Taborda, A. / Brissos, V. / Frazao, C. / Martins, L.O. | ||||||||||||
Funding support | United Kingdom, 3items
| ||||||||||||
Citation | Journal: Int J Mol Sci / Year: 2021 Title: Loops around the Heme Pocket Have a Critical Role in the Function and Stability of Bs DyP from Bacillus subtilis . Authors: Rodrigues, C.F. / Borges, P.T. / Scocozza, M.F. / Silva, D. / Taborda, A. / Brissos, V. / Frazao, C. / Martins, L.O. | ||||||||||||
History |
|
-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
---|
-Downloads & links
-Download
PDBx/mmCIF format | 7pl0.cif.gz | 570 KB | Display | PDBx/mmCIF format |
---|---|---|---|---|
PDB format | pdb7pl0.ent.gz | 472.7 KB | Display | PDB format |
PDBx/mmJSON format | 7pl0.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Summary document | 7pl0_validation.pdf.gz | 2 MB | Display | wwPDB validaton report |
---|---|---|---|---|
Full document | 7pl0_full_validation.pdf.gz | 2 MB | Display | |
Data in XML | 7pl0_validation.xml.gz | 57.3 KB | Display | |
Data in CIF | 7pl0_validation.cif.gz | 81.1 KB | Display | |
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/pl/7pl0 ftp://data.pdbj.org/pub/pdb/validation_reports/pl/7pl0 | HTTPS FTP |
-Related structure data
Related structure data | 7pkxSC S: Starting model for refinement C: citing same article (ref.) |
---|---|
Similar structure data |
-Links
-Assembly
Deposited unit |
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 |
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
2 |
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Unit cell |
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Noncrystallographic symmetry (NCS) | NCS domain:
NCS domain segments:
|