Entry | Database: PDB / ID: 7m2k |
---|
Title | CDC34A-Ubiquitin-2ab inhibitor complex |
---|
Components | - Ubiquitin
- Ubiquitin-conjugating enzyme E2 R1
|
---|
Keywords | TRANSFERASE / Ubiquitin / Ube2R1 / Ubiquitin conjugating enzyme / inhibitor |
---|
Function / homology | Function and homology information
(E3-independent) E2 ubiquitin-conjugating enzyme / symbiont entry into host cell via disruption of host cell glycocalyx / E2 ubiquitin-conjugating enzyme / symbiont entry into host cell via disruption of host cell envelope / virus tail / ubiquitin conjugating enzyme activity / DNA replication initiation / protein K48-linked ubiquitination / cellular response to interferon-beta / Synthesis of active ubiquitin: roles of E1 and E2 enzymes ...(E3-independent) E2 ubiquitin-conjugating enzyme / symbiont entry into host cell via disruption of host cell glycocalyx / E2 ubiquitin-conjugating enzyme / symbiont entry into host cell via disruption of host cell envelope / virus tail / ubiquitin conjugating enzyme activity / DNA replication initiation / protein K48-linked ubiquitination / cellular response to interferon-beta / Synthesis of active ubiquitin: roles of E1 and E2 enzymes / G1/S transition of mitotic cell cycle / CLEC7A (Dectin-1) signaling / FCERI mediated NF-kB activation / protein modification process / protein polyubiquitination / ubiquitin-protein transferase activity / Downstream TCR signaling / Antigen processing: Ubiquitination & Proteasome degradation / ubiquitin-dependent protein catabolic process / proteasome-mediated ubiquitin-dependent protein catabolic process / protein ubiquitination / nuclear speck / nucleoplasm / ATP binding / nucleus / cytosolSimilarity search - Function : / Pectate lyase superfamily protein / Rhamnogalacturonase A/epimerase, pectate lyase-like / Ubiquitin-conjugating enzyme, active site / Ubiquitin-conjugating (UBC) active site signature. / Ubiquitin-conjugating enzyme E2 / Ubiquitin-conjugating enzyme / Ubiquitin-conjugating (UBC) core domain profile. / Ubiquitin-conjugating enzyme E2, catalytic domain homologues / Ubiquitin-conjugating enzyme/RWD-like ...: / Pectate lyase superfamily protein / Rhamnogalacturonase A/epimerase, pectate lyase-like / Ubiquitin-conjugating enzyme, active site / Ubiquitin-conjugating (UBC) active site signature. / Ubiquitin-conjugating enzyme E2 / Ubiquitin-conjugating enzyme / Ubiquitin-conjugating (UBC) core domain profile. / Ubiquitin-conjugating enzyme E2, catalytic domain homologues / Ubiquitin-conjugating enzyme/RWD-like / Pectin lyase fold / Pectin lyase fold/virulence factor / Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 / Ubiquitin-like (UB roll) / Roll / Alpha BetaSimilarity search - Domain/homology |
---|
Biological species | Homo sapiens (human) |
---|
Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / molecular replacement / Resolution: 2.47 Å |
---|
Authors | Ceccarelli, D.F. / St-Cyr, D. / Tyers, M. / Sicheri, F. |
---|
Funding support | Canada, 2items Organization | Grant number | Country |
---|
Canadian Institutes of Health Research (CIHR) | FDN-167277 | Canada | Canadian Institutes of Health Research (CIHR) | FDN-143277 | Canada |
|
---|
Citation | Journal: Sci Adv / Year: 2021 Title: Identification and optimization of molecular glue compounds that inhibit a noncovalent E2 enzyme-ubiquitin complex. Authors: St-Cyr, D. / Ceccarelli, D.F. / Orlicky, S. / van der Sloot, A.M. / Tang, X. / Kelso, S. / Moore, S. / James, C. / Posternak, G. / Coulombe-Huntington, J. / Bertomeu, T. / Marinier, A. / Sicheri, F. / Tyers, M. |
---|
History | Deposition | Mar 16, 2021 | Deposition site: RCSB / Processing site: RCSB |
---|
Revision 1.0 | Nov 3, 2021 | Provider: repository / Type: Initial release |
---|
Revision 1.1 | Nov 10, 2021 | Group: Database references / Category: citation / citation_author Item: _citation.page_first / _citation.page_last ..._citation.page_first / _citation.page_last / _citation.pdbx_database_id_PubMed / _citation.title / _citation_author.identifier_ORCID / _citation_author.name |
---|
Revision 1.2 | Oct 18, 2023 | Group: Data collection / Refinement description Category: chem_comp_atom / chem_comp_bond / pdbx_initial_refinement_model |
---|
|
---|