- PDB-6y7g: Structure of the human RAB3C in complex with GDP -
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データを開く
IDまたはキーワード:
読み込み中...
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基本情報
登録情報
データベース: PDB / ID: 6y7g
タイトル
Structure of the human RAB3C in complex with GDP
要素
Ras-related protein Rab-3C
キーワード
STRUCTURAL GENOMICS / RAB3C / human Ras-related protein Rab-3C / Structural Genomics Consortium / SGC
機能・相同性
機能・相同性情報
: / GTP-dependent protein binding / RAB geranylgeranylation / myosin V binding / regulation of exocytosis / vesicle docking involved in exocytosis / antigen processing and presentation / protein secretion / protein localization to plasma membrane / synaptic vesicle ...: / GTP-dependent protein binding / RAB geranylgeranylation / myosin V binding / regulation of exocytosis / vesicle docking involved in exocytosis / antigen processing and presentation / protein secretion / protein localization to plasma membrane / synaptic vesicle / vesicle / endosome / GTPase activity / GTP binding / perinuclear region of cytoplasm / plasma membrane / cytosol 類似検索 - 分子機能
Rab3 / small GTPase Rab1 family profile. / Small GTPase / Ras family / Small GTP-binding protein domain / P-loop containing nucleoside triphosphate hydrolase 類似検索 - ドメイン・相同性
GUANOSINE-5'-DIPHOSPHATE / Ras-related protein Rab-3C 類似検索 - 構成要素
解像度: 2.3→63.78 Å / Cor.coef. Fo:Fc: 0.948 / Cor.coef. Fo:Fc free: 0.867 / SU B: 10.34 / SU ML: 0.242 / 交差検証法: THROUGHOUT / σ(F): 0 / ESU R: 0.395 / ESU R Free: 0.293 / 立体化学のターゲット値: MAXIMUM LIKELIHOOD 詳細: HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY
Rfactor
反射数
%反射
Selection details
Rfree
0.2895
792
4.9 %
RANDOM
Rwork
0.1999
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obs
0.2041
15301
98.39 %
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溶媒の処理
イオンプローブ半径: 0.8 Å / 減衰半径: 0.8 Å / VDWプローブ半径: 1.2 Å / 溶媒モデル: MASK