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Yorodumi- PDB-6uxi: Structure of serine hydroxymethyltransferase 8 from Glycine max c... -
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-Basic information
Entry | Database: PDB / ID: 6uxi | ||||||
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Title | Structure of serine hydroxymethyltransferase 8 from Glycine max cultivar Essex complexed with PLP-Glycine | ||||||
Components | Serine hydroxymethyltransferase | ||||||
Keywords | PLANT PROTEIN / TRANSFERASE / folate metabolism / methyltransferase / soybean cyst / nematode infection resistance / cytoplasmic enzyme | ||||||
Function / homology | Function and homology information purine nucleobase biosynthetic process / serine binding / glycine hydroxymethyltransferase / glycine hydroxymethyltransferase activity / glycine biosynthetic process from serine / L-serine catabolic process / tetrahydrofolate interconversion / cobalt ion binding / folic acid metabolic process / mRNA regulatory element binding translation repressor activity ...purine nucleobase biosynthetic process / serine binding / glycine hydroxymethyltransferase / glycine hydroxymethyltransferase activity / glycine biosynthetic process from serine / L-serine catabolic process / tetrahydrofolate interconversion / cobalt ion binding / folic acid metabolic process / mRNA regulatory element binding translation repressor activity / chloroplast / cellular response to leukemia inhibitory factor / methyltransferase activity / mRNA 5'-UTR binding / pyridoxal phosphate binding / methylation / protein homotetramerization / protein homodimerization activity / zinc ion binding / nucleus / cytosol Similarity search - Function | ||||||
Biological species | Glycine max (soybean) | ||||||
Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 2.1 Å | ||||||
Authors | Korasick, D.A. / Tanner, J.J. / Beamer, L.J. | ||||||
Funding support | United States, 1items
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Citation | Journal: J.Biol.Chem. / Year: 2020 Title: Impaired folate binding of serine hydroxymethyltransferase 8 from soybean underlies resistance to the soybean cyst nematode. Authors: Korasick, D.A. / Kandoth, P.K. / Tanner, J.J. / Mitchum, M.G. / Beamer, L.J. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 6uxi.cif.gz | 371.5 KB | Display | PDBx/mmCIF format |
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PDB format | pdb6uxi.ent.gz | 301.4 KB | Display | PDB format |
PDBx/mmJSON format | 6uxi.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/ux/6uxi ftp://data.pdbj.org/pub/pdb/validation_reports/ux/6uxi | HTTPS FTP |
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-Related structure data
Related structure data | 6uxhSC 6uxjC 6uxkC 6uxlC S: Starting model for refinement C: citing same article (ref.) |
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Similar structure data |
-Links
-Assembly
Deposited unit |
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Unit cell |
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Noncrystallographic symmetry (NCS) | NCS domain:
NCS domain segments: Ens-ID: 1
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