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Yorodumi- PDB-6lhr: Crystal structure of the complex between Vesicle Amine Transport-... -
+Open data
-Basic information
Entry | Database: PDB / ID: 6lhr | ||||||
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Title | Crystal structure of the complex between Vesicle Amine Transport-1 and NADP | ||||||
Components | Synaptic vesicle membrane protein VAT-1 homolog | ||||||
Keywords | OXIDOREDUCTASE / VAT1 / Complex / Quinone | ||||||
Function / homology | Function and homology information negative regulation of mitochondrial fusion / Oxidoreductases / azurophil granule lumen / mitochondrial outer membrane / oxidoreductase activity / Neutrophil degranulation / zinc ion binding / extracellular exosome / extracellular region / membrane Similarity search - Function | ||||||
Biological species | Homo sapiens (human) | ||||||
Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 2.62 Å | ||||||
Authors | Hakoshima, T. / Kim, S.-Y. / Mori, T. | ||||||
Citation | Journal: Sci Rep / Year: 2021 Title: Structural insights into vesicle amine transport-1 (VAT-1) as a member of the NADPH-dependent quinone oxidoreductase family. Authors: Kim, S.-Y. / Mori, T. / Chek, M.F. / Furuya, S. / Matsumoto, K. / Yajima, T. / Ogura, T. / Hakoshima, T. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 6lhr.cif.gz | 328.7 KB | Display | PDBx/mmCIF format |
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PDB format | pdb6lhr.ent.gz | 216.8 KB | Display | PDB format |
PDBx/mmJSON format | 6lhr.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Summary document | 6lhr_validation.pdf.gz | 1.5 MB | Display | wwPDB validaton report |
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Full document | 6lhr_full_validation.pdf.gz | 1.6 MB | Display | |
Data in XML | 6lhr_validation.xml.gz | 51.1 KB | Display | |
Data in CIF | 6lhr_validation.cif.gz | 67.6 KB | Display | |
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/lh/6lhr ftp://data.pdbj.org/pub/pdb/validation_reports/lh/6lhr | HTTPS FTP |
-Related structure data
Related structure data | 6liiC 4a27S S: Starting model for refinement C: citing same article (ref.) |
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Similar structure data |
-Links
-Assembly
Deposited unit |
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Unit cell |
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Noncrystallographic symmetry (NCS) | NCS domain:
NCS domain segments: Ens-ID: 1
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