登録情報 | データベース: PDB / ID: 6j74 |
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タイトル | Complex of GGTaseIII and full-length Ykt6 |
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要素 | - Geranylgeranyl transferase type-2 subunit beta
- Protein prenyltransferase alpha subunit repeat-containing protein 1
- Synaptobrevin homolog YKT6
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キーワード | LIPID BINDING PROTEIN / lipid transferase |
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機能・相同性 | 機能・相同性情報
protein prenyltransferase activity / protein geranylgeranyltransferase type II / protein-cysteine S-palmitoyltransferase activity / Rab-protein geranylgeranyltransferase complex / vesicle targeting / basal dendrite / Intra-Golgi traffic / Rab geranylgeranyltransferase activity / protein geranylgeranylation / SNARE complex ...protein prenyltransferase activity / protein geranylgeranyltransferase type II / protein-cysteine S-palmitoyltransferase activity / Rab-protein geranylgeranyltransferase complex / vesicle targeting / basal dendrite / Intra-Golgi traffic / Rab geranylgeranyltransferase activity / protein geranylgeranylation / SNARE complex / SNAP receptor activity / RAB geranylgeranylation / apical dendrite / vesicle docking involved in exocytosis / retrograde transport, endosome to Golgi / COPII-mediated vesicle transport / TP53 regulates transcription of several additional cell death genes whose specific roles in p53-dependent apoptosis remain uncertain / CDC42 GTPase cycle / RHOG GTPase cycle / RHOA GTPase cycle / RAC3 GTPase cycle / endoplasmic reticulum to Golgi vesicle-mediated transport / COPI-mediated anterograde transport / transport vesicle / 転移酵素; アシル基を移すもの; アミノアシル基以外のアシル基を移すもの / RAC1 GTPase cycle / visual perception / endoplasmic reticulum-Golgi intermediate compartment membrane / protein modification process / cytoplasmic vesicle membrane / small GTPase binding / protein transport / endosome / cadherin binding / Golgi membrane / neuronal cell body / Golgi apparatus / endoplasmic reticulum / mitochondrion / zinc ion binding / plasma membrane / cytoplasm / cytosol類似検索 - 分子機能 YKT6, SNARE motif / Longin domain / Geranylgeranyl transferase type-2 subunit beta / Longin domain profile. / Longin domain / Regulated-SNARE-like domain / Regulated-SNARE-like domain / Single alpha-helices involved in coiled-coils or other helix-helix interfaces - #110 / Synaptobrevin / v-SNARE, coiled-coil homology domain ...YKT6, SNARE motif / Longin domain / Geranylgeranyl transferase type-2 subunit beta / Longin domain profile. / Longin domain / Regulated-SNARE-like domain / Regulated-SNARE-like domain / Single alpha-helices involved in coiled-coils or other helix-helix interfaces - #110 / Synaptobrevin / v-SNARE, coiled-coil homology domain / v-SNARE coiled-coil homology domain profile. / Prenyltransferase subunit beta / Protein prenyltransferase, alpha subunit / Protein prenyltransferase alpha subunit repeat / Protein prenyltransferases alpha subunit repeat profile. / PFTB repeat / Prenyltransferase and squalene oxidase repeat / Glycosyltransferase - #20 / Longin-like domain superfamily / Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid / Glycosyltransferase / Alpha/alpha barrel / Beta-Lactamase / Single alpha-helices involved in coiled-coils or other helix-helix interfaces / Up-down Bundle / 2-Layer Sandwich / Mainly Alpha / Alpha Beta類似検索 - ドメイン・相同性 PHOSPHATE ION / Synaptobrevin homolog YKT6 / Geranylgeranyl transferase type-2 subunit beta / Protein prenyltransferase alpha subunit repeat-containing protein 1類似検索 - 構成要素 |
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生物種 | Homo sapiens (ヒト) |
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手法 | X線回折 / シンクロトロン / 分子置換 / 解像度: 3.212 Å |
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データ登録者 | Goto-Ito, S. / Yamagata, A. / Sato, Y. / Fukai, S. |
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資金援助 | 日本, 3件 組織 | 認可番号 | 国 |
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Japan Science and Technology | CREST JPMJCR12M5 | 日本 | Japan Society for the Promotion of Science | KAKENHI 16K08574 | 日本 | Japan Society for the Promotion of Science | KAKENHI 16H05148 | 日本 |
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引用 | ジャーナル: To Be Published タイトル: Complex of GGTaseIII and full-length Ykt6 著者: Goto-Ito, S. / Shirakawa, R. / Fukai, S. |
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履歴 | 登録 | 2019年1月16日 | 登録サイト: PDBJ / 処理サイト: PDBJ |
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改定 1.0 | 2020年1月22日 | Provider: repository / タイプ: Initial release |
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改定 1.1 | 2023年11月22日 | Group: Data collection / Database references / Refinement description カテゴリ: chem_comp_atom / chem_comp_bond ...chem_comp_atom / chem_comp_bond / database_2 / pdbx_initial_refinement_model Item: _database_2.pdbx_DOI / _database_2.pdbx_database_accession |
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