- PDB-6ioa: The structure of UdgX in complex with uracil -
+
Open data
ID or keywords:
Loading...
-
Basic information
Entry
Database: PDB / ID: 6ioa
Title
The structure of UdgX in complex with uracil
Components
Phage SPO1 DNA polymerase-related protein
Keywords
HYDROLASE / uracil DNA glycosylase / DNA repair / iron-sulfur
Function / homology
Function and homology information
uracil DNA N-glycosylase activity / nucleotidyltransferase activity / 4 iron, 4 sulfur cluster binding / DNA repair / metal ion binding Similarity search - Function
Resolution: 2.15→24.65 Å / Cor.coef. Fo:Fc: 0.941 / Cor.coef. Fo:Fc free: 0.902 / SU B: 5.076 / SU ML: 0.134 / Cross valid method: THROUGHOUT / ESU R: 0.245 / ESU R Free: 0.188 / Details: HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
Rfactor
Num. reflection
% reflection
Selection details
Rfree
0.21211
500
4.7 %
RANDOM
Rwork
0.16288
-
-
-
obs
0.16529
10151
98.02 %
-
Solvent computation
Ion probe radii: 0.8 Å / Shrinkage radii: 0.8 Å / VDW probe radii: 1.2 Å