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- PDB-6ib6: Solution structure of the water-soluble LU-domain of human Lypd6 ... -
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Open data
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Basic information
Entry | Database: PDB / ID: 6ib6 | ||||||
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Title | Solution structure of the water-soluble LU-domain of human Lypd6 protein | ||||||
![]() | Ly6/PLAUR domain-containing protein 6 | ||||||
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Function / homology | ![]() acetylcholine receptor regulator activity / acetylcholine receptor inhibitor activity / positive regulation of canonical Wnt signaling pathway / neuron projection / ![]() ![]() ![]() ![]() Similarity search - Function | ||||||
Biological species | ![]() ![]() | ||||||
Method | ![]() | ||||||
![]() | Tsarev, A.V. / Kulbatskii, D.S. / Paramonov, A.S. / Lyukmanova, E.N. / Shenkarev, Z.O. | ||||||
Funding support | ![]()
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![]() | ![]() Title: Structural Diversity and Dynamics of Human Three-Finger Proteins Acting on Nicotinic Acetylcholine Receptors. Authors: Paramonov, A.S. / Kocharovskaya, M.V. / Tsarev, A.V. / Kulbatskii, D.S. / Loktyushov, E.V. / Shulepko, M.A. / Kirpichnikov, M.P. / Lyukmanova, E.N. / Shenkarev, Z.O. | ||||||
History |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 564.1 KB | Display | ![]() |
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PDB format | ![]() | 487.4 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Arichive directory | ![]() ![]() | HTTPS FTP |
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-Related structure data
Related structure data | ![]() 6zsoC ![]() 6zssC ![]() 6zzeC ![]() 6zzfC C: citing same article ( |
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Similar structure data | |
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Links
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Assembly
Deposited unit | ![]()
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NMR ensembles |
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Components
#1: Protein | Mass: 10941.329 Da / Num. of mol.: 1 Source method: isolated from a genetically manipulated source Details: N-terminal Met was added due to recombinant production Source: (gene. exp.) ![]() ![]() Details (production host): Lypd6 coding sequence cloned into pET22b(+) between NdeI and HindIII sites Production host: ![]() ![]() ![]() |
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-Experimental details
-Experiment
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NMR experiment |
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Sample preparation
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Sample |
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Sample conditions | Ionic strength: 20 mM / Ionic strength err: 5 / Label: cond_1 / pH: 7.0 / PH err: 0.1 / Pressure: AMBIENT Pa / Temperature: 303 K / Temperature err: 0.1 |
-NMR measurement
NMR spectrometer |
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Processing
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Refinement | Method: torsion angle dynamics / Software ordinal: 1 | ||||||||||||||||
NMR representative | Selection criteria: target function | ||||||||||||||||
NMR ensemble | Conformer selection criteria: structures with the least restraint violations Conformers calculated total number: 500 / Conformers submitted total number: 20 |