Entry Database : PDB / ID : 6hmh Structure visualization Downloads & linksTitle Structure of the GH99 endo-alpha-mannanase from Bacteroides xylanisolvens in complex with alpha-Glc-1,3-(1,2-anhydro-carba-glucosamine) and alpha-1,2-mannobiose ComponentsGlycosyl hydrolase family 71 Details Keywords HYDROLASEFunction / homology Function and homology informationFunction Domain/homology Component
Biological species Bacteroides xylanisolvens XB1A (bacteria)Method X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution : 1.03 Å DetailsAuthors Sobala, L.F. / Lu, D. / Zhu, S. / Bernardo-Seisdedos, G. / Millet, O. / Zhang, Y. / Sollogoub, M. / Jimenez-Barbero, J. / Davies, G.J. Funding support United Kingdom, Spain, 3items Details Hide detailsOrganization Grant number Country European Research Council 322942 United Kingdom Spanish Ministry of Economy and Competitiveness CTQ2017-85496-P Spain Spanish Ministry of Economy and Competitiveness CTQ2015-64597-C2-1P Spain
CitationJournal : Org.Lett. / Year : 2018Title : From 1,4-Disaccharide to 1,3-Glycosyl Carbasugar: Synthesis of a Bespoke Inhibitor of Family GH99 Endo-alpha-mannosidase.Authors : Lu, D. / Zhu, S. / Sobala, L.F. / Bernardo-Seisdedos, G. / Millet, O. / Zhang, Y. / Jimenez-Barbero, J. / Davies, G.J. / Sollogoub, M. History Deposition Sep 12, 2018 Deposition site : PDBE / Processing site : PDBERevision 1.0 Sep 26, 2018 Provider : repository / Type : Initial releaseRevision 1.1 Nov 28, 2018 Group : Data collection / Database references / Category : citation / citation_authorItem : _citation.country / _citation.journal_abbrev ... _citation.country / _citation.journal_abbrev / _citation.journal_id_CSD / _citation.journal_id_ISSN / _citation.pdbx_database_id_DOI / _citation.pdbx_database_id_PubMed / _citation.title / _citation.year / _citation_author.identifier_ORCID Revision 2.0 Dec 19, 2018 Group : Atomic model / Data collection / Derived calculationsCategory : atom_site / atom_site_anisotrop ... atom_site / atom_site_anisotrop / pdbx_nonpoly_scheme / struct_conn / struct_site / struct_site_gen Item : _atom_site.auth_seq_id / _atom_site_anisotrop.pdbx_auth_seq_id ... _atom_site.auth_seq_id / _atom_site_anisotrop.pdbx_auth_seq_id / _pdbx_nonpoly_scheme.pdb_seq_num / _struct_conn.ptnr1_auth_seq_id / _struct_conn.ptnr2_auth_seq_id / _struct_site.pdbx_auth_seq_id / _struct_site_gen.auth_seq_id Revision 2.1 Apr 24, 2019 Group : Data collection / Database references / Category : citation / citation_author / pdbx_database_procItem : _citation.journal_abbrev / _citation.journal_id_ISSN ... _citation.journal_abbrev / _citation.journal_id_ISSN / _citation.journal_volume / _citation.page_first / _citation.page_last / _citation_author.identifier_ORCID Revision 3.0 Jul 29, 2020 Group : Atomic model / Data collection ... Atomic model / Data collection / Derived calculations / Structure summary Category : atom_site / atom_site_anisotrop ... atom_site / atom_site_anisotrop / chem_comp / entity / entity_name_com / pdbx_branch_scheme / pdbx_chem_comp_identifier / pdbx_entity_branch / pdbx_entity_branch_descriptor / pdbx_entity_branch_link / pdbx_entity_branch_list / pdbx_entity_nonpoly / pdbx_molecule_features / pdbx_nonpoly_scheme / pdbx_struct_assembly_gen / pdbx_struct_special_symmetry / struct_asym / struct_conn / struct_site / struct_site_gen Item : _atom_site.B_iso_or_equiv / _atom_site.Cartn_x ... _atom_site.B_iso_or_equiv / _atom_site.Cartn_x / _atom_site.Cartn_y / _atom_site.Cartn_z / _atom_site.auth_asym_id / _atom_site.auth_atom_id / _atom_site.auth_comp_id / _atom_site.auth_seq_id / _atom_site.label_asym_id / _atom_site.label_atom_id / _atom_site.label_comp_id / _atom_site.label_entity_id / _atom_site.occupancy / _atom_site.type_symbol / _atom_site_anisotrop.U[1][1] / _atom_site_anisotrop.U[1][2] / _atom_site_anisotrop.U[1][3] / _atom_site_anisotrop.U[2][2] / _atom_site_anisotrop.U[2][3] / _atom_site_anisotrop.U[3][3] / _atom_site_anisotrop.pdbx_auth_asym_id / _atom_site_anisotrop.pdbx_auth_atom_id / _atom_site_anisotrop.pdbx_auth_comp_id / _atom_site_anisotrop.pdbx_auth_seq_id / _atom_site_anisotrop.pdbx_label_asym_id / _atom_site_anisotrop.pdbx_label_atom_id / _atom_site_anisotrop.pdbx_label_comp_id / _atom_site_anisotrop.type_symbol / _chem_comp.name / _chem_comp.type / _entity.formula_weight / _entity.pdbx_description / _entity.pdbx_number_of_molecules / _entity.src_method / _entity.type / _pdbx_struct_assembly_gen.asym_id_list / _pdbx_struct_special_symmetry.label_asym_id / _struct_conn.ptnr1_auth_asym_id / _struct_conn.ptnr1_auth_comp_id / _struct_conn.ptnr1_auth_seq_id / _struct_conn.ptnr1_label_asym_id / _struct_conn.ptnr1_label_atom_id / _struct_conn.ptnr1_label_comp_id / _struct_conn.ptnr2_auth_asym_id / _struct_conn.ptnr2_auth_comp_id / _struct_conn.ptnr2_auth_seq_id / _struct_conn.ptnr2_label_asym_id / _struct_conn.ptnr2_label_atom_id / _struct_conn.ptnr2_label_comp_id Description : Carbohydrate remediation / Provider : repository / Type : RemediationRevision 3.1 Feb 10, 2021 Group : Database references / Derived calculations / Structure summaryCategory : chem_comp / pdbx_related_exp_data_set / struct_connItem : _chem_comp.pdbx_synonyms / _struct_conn.pdbx_leaving_atom_flagRevision 3.2 Jan 24, 2024 Group : Data collection / Database references / Refinement descriptionCategory : chem_comp_atom / chem_comp_bond ... chem_comp_atom / chem_comp_bond / database_2 / pdbx_initial_refinement_model Item : _database_2.pdbx_DOI / _database_2.pdbx_database_accession
Show all Show less