Mass: 2706.785 Da / Num. of mol.: 1 / Source method: obtained synthetically / Source: (synth.) Sulfolobus islandicus (acidophilic)
#2: Protein
functionalpRN1primase
Mass: 13528.738 Da / Num. of mol.: 1 Source method: isolated from a genetically manipulated source Details: The first stage of the hybrid structure determination includes structural data from the helix bundle domain quaternary structure Source: (gene. exp.) Sulfolobus islandicus (acidophilic) / Plasmid: pET28b / Production host: Escherichia coli BL21(DE3) (bacteria) / References: UniProt: Q54324
Mass: 24.305 Da / Num. of mol.: 2 / Source method: obtained synthetically / Formula: Mg
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Experimental details
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Experiment
Experiment
Method
SOLUTION NMR
SOLID-STATE NMR
NMR experiment
Conditions-ID
Experiment-ID
Solution-ID
Sample state
Spectrometer-ID
Type
1
1
4
isotropic
2
3D HNCA
1
2
4
isotropic
2
3DHN(CO)CA
1
3
4
isotropic
2
3D HN(CA)CB
1
4
4
isotropic
2
3DCBCA(CO)NH
1
5
4
isotropic
2
3D HNCO
1
6
4
isotropic
2
3DC(CO)NH
1
7
4
isotropic
2
3DH(CCO)NH
1
8
4
isotropic
1
3D 1H-15N NOESY
1
9
4
isotropic
1
3D 1H-13C NOESY aliphatic
1
10
4
isotropic
1
3D 1H-13C NOESY aromatic
1
11
5
isotropic
1
3D 1H-13C NOESY aromatic
2
12
6
isotropic
1
3D 1H-15N NOESY
1
13
9
isotropic
2
2D 1H-1H NOESY
1
14
9
isotropic
2
2D 1H-1H TOCSY
2
15
7
isotropic
2
2D 1H-1H NOESY
2
16
6
isotropic
2
2D 1H-1H TOCSY
1
17
5
isotropic
3
2D 1H-13C HSQC aromatic
1
18
5
isotropic
3
2D 1H-13C HSQC aliphatic
1
19
5
isotropic
2
2D-F1fF2f-NOESY
1
20
5
isotropic
2
2D-F2f-NOESY
1
21
5
isotropic
2
3D-13C-aliphatic-HfilteredHedited-NOESY
1
22
5
isotropic
2
3D-13C-aliphatic-HfilteredHedited-NOESY
2
23
10
isotropic
2
3D-13C-aromatic-HfilteredHedited-NOESY
2
24
10
isotropic
2
3D-13C-aromatic-HfilteredHedited-NOESY
3
25
7
isotropic
2
2D-imino-NOESY
1
26
7
isotropic
3
2D-natural-abundance-CHSQC
4
27
8
isotropic
4
DARR
4
28
8
isotropic
4
NCX(R)
4
29
8
isotropic
4
NCX(W)
4
30
8
isotropic
5
CHHP
4
31
8
isotropic
5
NHHP
4
32
8
isotropic
5
31PCPMAS
4
33
8
isotropic
5
31P-31P-DARR
4
34
8
isotropic
4
31PCPMAS
1
35
4
isotropic
1
2D 1H-15N HSQC
2
36
4
isotropic
1
2D 1H-15N HSQC
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Sample preparation
Details
Type
Solution-ID
Contents
Label
Solvent system
solution
4
1.0 mM [U-99% 13C; U-99% 15N] pRN1 helix bundle domain in complex with DNA and ATP, 1.0 mM DNA (5'-D(*CP*TP*GP*TP*GP*CP*TP*CP*A)-3'), 4.0 mM ADENOSINE-5'-TRIPHOSPHATE, 10 mM magnesium, 90% H2O/10% D2O
13C-15N-hbd-hybrid-H2O-pH7
90% H2O/10% D2O
solution
5
0.7 mM [U-100% 13C] pRN1 helix bundle domain in complex with DNA and ATP, 0.7 mM DNA (5'-D(*CP*TP*GP*TP*GP*CP*TP*CP*A)-3'), 4.0 mM ADENOSINE-5'-TRIPHOSPHATE, 10.0 mM magnesium, 100% D2O
13C-hbd-hybrid-D2O-pH7
100% D2O
solution
6
1.0 mM [U-99% 15N] pRN1 helix bundle domain in complex with DNA and ATP, 1.0 mM DNA (5'-D(*CP*TP*GP*TP*GP*CP*TP*CP*A)-3'), 4.0 mM ADENOSINE-5'-TRIPHOSPHATE, 10.0 mM magnesium, 90% H2O/10% D2O
15N-hbd-hybrid-H2O-pH5
90% H2O/10% D2O
solution
7
1.0 mM pRN1 the helix bundle domain in complex with DNA and ATP, 1.0 mM DNA (5'-D(*CP*TP*GP*TP*GP*CP*TP*CP*A)-3'), 4.0 mM ADENOSINE-5'-TRIPHOSPHATE, 10.0 mM magnesium, 90% H2O/10% D2O
1H-hbd-hybrid-H2O-pH5
90% H2O/10% D2O
solution
9
1.0 mM pRN1 helix bundle domain in complex with DNA and ATP, 1.0 mM DNA (5'-D(*CP*TP*GP*TP*GP*CP*TP*CP*A)-3'), 4.0 mM ADENOSINE-5'-TRIPHOSPHATE, 10.0 mM magnesium, 90% H2O/10% D2O
1H-hbd-hybrid-H2O-pH7
90% H2O/10% D2O
solid
8
4.0 mM [U-99% 13C; U-99% 15N] functional-pRN1-primase, 4.0 mM DNA (5'-D(*CP*TP*GP*TP*GP*CP*TP*CP*A)-3'), 10.0 mM ADENOSINE-5'-TRIPHOSPHATE, 10.0 mM magnesium, 90% H2O/10% D2O
13C-15N-pRN1-primase-solid-state
90% H2O/10% D2O
solution
10
1.0 mM [U-100% 13C] pRN1 helix bundle domain in complex with DNA and ATP, 1.0 mM DNA (5'-D(*CP*TP*GP*TP*GP*CP*TP*CP*A)-3'), 4.0 mM ADENOSINE-5'-TRIPHOSPHATE, 10 mM magnesium, 100% D2O