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Yorodumi- PDB-6fab: THREE-DIMENSIONAL STRUCTURE OF MURINE ANTI-P-AZOPHENYLARSONATE FA... -
+Open data
-Basic information
Entry | Database: PDB / ID: 6fab | ||||||
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Title | THREE-DIMENSIONAL STRUCTURE OF MURINE ANTI-P-AZOPHENYLARSONATE FAB 36-71. 1. X-RAY CRYSTALLOGRAPHY, SITE-DIRECTED MUTAGENESIS, AND MODELING OF THE COMPLEX WITH HAPTEN | ||||||
Components |
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Keywords | IMMUNOGLOBULIN | ||||||
Function / homology | Function and homology information | ||||||
Biological species | Mus musculus (house mouse) | ||||||
Method | X-RAY DIFFRACTION / Resolution: 1.9 Å | ||||||
Authors | Strong, R.K. / Rose, D.R. / Petsko, G.A. / Sharon, J. / Margolies, M.N. | ||||||
Citation | Journal: Biochemistry / Year: 1991 Title: Three-dimensional structure of murine anti-p-azophenylarsonate Fab 36-71. 1. X-ray crystallography, site-directed mutagenesis, and modeling of the complex with hapten. Authors: Strong, R.K. / Campbell, R. / Rose, D.R. / Petsko, G.A. / Sharon, J. / Margolies, M.N. #1: Journal: Biochemistry / Year: 1991 Title: Three-Dimensional Structure of Murine Anti-P-Azophenylarsonate Fab 36-71. 2. Structural Basis of Hapten Binding and Idiotypy Authors: Strong, R.K. / Petsko, G.A. / Sharon, J. / Margolies, M.N. #2: Journal: Proc.Natl.Acad.Sci.USA / Year: 1990 Title: Crystal Structure of the Antigen-Binding Fragment of the Murine Anti-Arsonate Monoclonal Antibody 36-71 at 2.9 Angstroms Resolution Authors: Rose, D.R. / Strong, R.K. / Margolies, M.N. / Gefter, M.L. / Petsko, G.A. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 6fab.cif.gz | 95.8 KB | Display | PDBx/mmCIF format |
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PDB format | pdb6fab.ent.gz | 73.5 KB | Display | PDB format |
PDBx/mmJSON format | 6fab.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Summary document | 6fab_validation.pdf.gz | 378.1 KB | Display | wwPDB validaton report |
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Full document | 6fab_full_validation.pdf.gz | 399.8 KB | Display | |
Data in XML | 6fab_validation.xml.gz | 12.2 KB | Display | |
Data in CIF | 6fab_validation.cif.gz | 18.1 KB | Display | |
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/fa/6fab ftp://data.pdbj.org/pub/pdb/validation_reports/fa/6fab | HTTPS FTP |
-Related structure data
-Links
-Assembly
Deposited unit |
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1 |
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Unit cell |
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Atom site foot note | 1: RESIDUES PRO L 8, PRO L 95, PRO L 141, PRO H 155, PRO H 157, AND PRO H 197 ARE CIS PROLINES. |
-Components
#1: Antibody | Mass: 23644.014 Da / Num. of mol.: 1 Source method: isolated from a genetically manipulated source Source: (gene. exp.) Mus musculus (house mouse) / References: UniProt: P01837 |
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#2: Antibody | Mass: 23872.635 Da / Num. of mol.: 1 Source method: isolated from a genetically manipulated source Source: (gene. exp.) Mus musculus (house mouse) |
#3: Water | ChemComp-HOH / |
-Experimental details
-Experiment
Experiment | Method: X-RAY DIFFRACTION |
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-Sample preparation
Crystal | Density Matthews: 2.34 Å3/Da / Density % sol: 47.35 % |
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-Data collection
Reflection | *PLUS Highest resolution: 1.7 Å / Rmerge(I) obs: 0.0664 |
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-Processing
Software |
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Refinement | Rfactor obs: 0.209 / Highest resolution: 1.9 Å | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Refinement step | Cycle: LAST / Highest resolution: 1.9 Å
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Refine LS restraints |
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Software | *PLUS Name: X-PLOR / Classification: refinement | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Refine LS restraints | *PLUS
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