[English] 日本語
Yorodumi- PDB-6e98: Solution NMR Structure of a Class I Hydrophobin from Phanerochaet... -
+Open data
-Basic information
Entry | Database: PDB / ID: 6.0E+98 | ||||||
---|---|---|---|---|---|---|---|
Title | Solution NMR Structure of a Class I Hydrophobin from Phanerochaete carnosa | ||||||
Components | Hydrophobin | ||||||
Keywords | STRUCTURAL PROTEIN / Hydrophobin | ||||||
Function / homology | Fungal hydrophobin / Hydrophobin / Hydrophobins / structural constituent of cell wall / fungal-type cell wall / extracellular region / Hydrophobin Function and homology information | ||||||
Biological species | Phanerochaete carnosa | ||||||
Method | SOLUTION NMR / torsion angle dynamics | ||||||
Authors | Kenward, C. / Langelaan, D.N. | ||||||
Funding support | Canada, 1items
| ||||||
Citation | Journal: To Be Published Title: Solution NMR Structure of a Class I Hydrophobin from Phanerochaete carnosa Authors: Kenward, C. / Langelaan, D.N. | ||||||
History |
|
-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
---|
-Downloads & links
-Download
PDBx/mmCIF format | 6e98.cif.gz | 474.2 KB | Display | PDBx/mmCIF format |
---|---|---|---|---|
PDB format | pdb6e98.ent.gz | 405.3 KB | Display | PDB format |
PDBx/mmJSON format | 6e98.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Summary document | 6e98_validation.pdf.gz | 533.8 KB | Display | wwPDB validaton report |
---|---|---|---|---|
Full document | 6e98_full_validation.pdf.gz | 1 MB | Display | |
Data in XML | 6e98_validation.xml.gz | 111.5 KB | Display | |
Data in CIF | 6e98_validation.cif.gz | 87.4 KB | Display | |
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/e9/6e98 ftp://data.pdbj.org/pub/pdb/validation_reports/e9/6e98 | HTTPS FTP |
-Related structure data
Similar structure data | |
---|---|
Other databases |
|
-Links
-Assembly
Deposited unit |
| |||||||||
---|---|---|---|---|---|---|---|---|---|---|
1 |
| |||||||||
NMR ensembles |
|
-Components
#1: Protein | Mass: 8286.277 Da / Num. of mol.: 1 Source method: isolated from a genetically manipulated source Source: (gene. exp.) Phanerochaete carnosa (strain HHB-10118-sp) (fungus) Strain: HHB-10118-sp / Gene: PHACADRAFT_78259 / Production host: Escherichia coli DH1 (bacteria) / Strain (production host): Shuffle / References: UniProt: K5VRK4 |
---|
-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NMR experiment |
|
-Sample preparation
Details |
| ||||||||||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample |
| ||||||||||||||||||||||||||||||||
Sample conditions | Ionic strength: 70 mM / Label: Condition 1 / pH: 6.5 / Pressure: 1 atm / Temperature: 303.15 K |
-NMR measurement
NMR spectrometer |
|
---|
-Processing
NMR software |
| ||||||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Refinement | Method: torsion angle dynamics / Software ordinal: 2 | ||||||||||||||||||||||||||||
NMR representative | Selection criteria: lowest energy | ||||||||||||||||||||||||||||
NMR ensemble | Conformer selection criteria: structures with the lowest energy Conformers calculated total number: 100 / Conformers submitted total number: 20 |