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Yorodumi- PDB-6aqy: Crystal structure of a gdp-l-fucose synthetase from Naegleria fowleri -
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Open data
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Basic information
| Entry | Database: PDB / ID: 6aqy | ||||||
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| Title | Crystal structure of a gdp-l-fucose synthetase from Naegleria fowleri | ||||||
Components | gdp-l-fucose synthetase | ||||||
Keywords | OXIDOREDUCTASE / NIAID / structural genomics / brain-eating bacteria / NADP-dependent / Seattle Structural Genomics Center for Infectious Disease / SSGCID | ||||||
| Function / homology | Function and homology informationGDP-L-fucose synthase / GDP-L-fucose synthase activity / 'de novo' GDP-L-fucose biosynthetic process / isomerase activity / nucleotide binding Similarity search - Function | ||||||
| Biological species | Naegleria fowleri (brain-eating amoeba) | ||||||
| Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 2.55 Å | ||||||
Authors | Seattle Structural Genomics Center for Infectious Disease (SSGCID) | ||||||
Citation | Journal: To Be PublishedTitle: Crystal structure of a gdp-l-fucose synthetase from Naegleria fowleri Authors: Edwards, T.E. / Dranow, D.M. / Lorimer, D.D. / Seattle Structural Genomics Center for Infectious Disease (SSGCID) | ||||||
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Structure visualization
| Structure viewer | Molecule: Molmil Jmol/JSmol |
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Downloads & links
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Download
| PDBx/mmCIF format | 6aqy.cif.gz | 750.8 KB | Display | PDBx/mmCIF format |
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| PDB format | pdb6aqy.ent.gz | 620.9 KB | Display | PDB format |
| PDBx/mmJSON format | 6aqy.json.gz | Tree view | PDBx/mmJSON format | |
| Others | Other downloads |
-Validation report
| Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/aq/6aqy ftp://data.pdbj.org/pub/pdb/validation_reports/aq/6aqy | HTTPS FTP |
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-Related structure data
| Related structure data | ![]() 4e5yS S: Starting model for refinement |
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Assembly
| Deposited unit | ![]()
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| Unit cell |
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| Noncrystallographic symmetry (NCS) | NCS domain:
NCS domain segments: Ens-ID: 1
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About Yorodumi



Naegleria fowleri (brain-eating amoeba)
X-RAY DIFFRACTION
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