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Yorodumi- PDB-5zg4: Crystal Structure of Triosephosphate isomerase SAD deletion mutan... -
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Basic information
| Entry | Database: PDB / ID: 5zg4 | ||||||
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| Title | Crystal Structure of Triosephosphate isomerase SAD deletion mutant from Opisthorchis viverrini | ||||||
Components | Triosephosphate isomerase | ||||||
Keywords | ISOMERASE / Tim-barrel / Triosephosphate isomerase | ||||||
| Function / homology | Function and homology informationtriose-phosphate isomerase / triose-phosphate isomerase activity / glyceraldehyde-3-phosphate biosynthetic process / glycerol catabolic process / glycolytic process / gluconeogenesis / metal ion binding / cytosol Similarity search - Function | ||||||
| Biological species | Opisthorchis viverrini (Southeast Asian liver fluke) | ||||||
| Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 1.746 Å | ||||||
Authors | Son, J. / Kim, S. / Kim, S.E. / Lee, H. / Lee, M.R. / Hwang, K.Y. | ||||||
Citation | Journal: Sci Rep / Year: 2018Title: Structural Analysis of an Epitope Candidate of Triosephosphate Isomerase in Opisthorchis viverrini. Authors: Son, J. / Kim, S. / Kim, S.E. / Lee, H. / Lee, M.R. / Hwang, K.Y. | ||||||
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Structure visualization
| Structure viewer | Molecule: Molmil Jmol/JSmol |
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Downloads & links
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Download
| PDBx/mmCIF format | 5zg4.cif.gz | 393.4 KB | Display | PDBx/mmCIF format |
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| PDB format | pdb5zg4.ent.gz | 320.2 KB | Display | PDB format |
| PDBx/mmJSON format | 5zg4.json.gz | Tree view | PDBx/mmJSON format | |
| Others | Other downloads |
-Validation report
| Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/zg/5zg4 ftp://data.pdbj.org/pub/pdb/validation_reports/zg/5zg4 | HTTPS FTP |
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-Related structure data
| Related structure data | ![]() 5zfxSC ![]() 5zg5C ![]() 5zgaC S: Starting model for refinement C: citing same article ( |
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| Similar structure data |
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Assembly
| Deposited unit | ![]()
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| 2 | ![]()
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| Unit cell |
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| Noncrystallographic symmetry (NCS) | NCS domain:
NCS domain segments: Ens-ID: 1
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About Yorodumi



Opisthorchis viverrini (Southeast Asian liver fluke)
X-RAY DIFFRACTION
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