- PDB-5y5b: Crystal Structure Of IMP-1 Metallo-beta-lactamase -
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ID or keywords:
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Basic information
Entry
Database: PDB / ID: 5y5b
Title
Crystal Structure Of IMP-1 Metallo-beta-lactamase
Components
Metallo-beta-lactamase type 2
Keywords
HYDROLASE
Function / homology
Function and homology information
antibiotic catabolic process / beta-lactamase activity / beta-lactamase / periplasmic space / response to antibiotic / zinc ion binding Similarity search - Function
Beta-lactamases class B signature 2. / Beta-lactamases class B signature 1. / Beta-lactamase, class-B, conserved site / Metallo-beta-lactamase superfamily / Ribonuclease Z/Hydroxyacylglutathione hydrolase-like / Metallo-beta-lactamase; Chain A / Metallo-beta-lactamase superfamily / Metallo-beta-lactamase / Ribonuclease Z/Hydroxyacylglutathione hydrolase-like / 4-Layer Sandwich / Alpha Beta Similarity search - Domain/homology
Resolution: 1.7→50.53 Å / Cor.coef. Fo:Fc: 0.963 / Cor.coef. Fo:Fc free: 0.945 / SU B: 1.743 / SU ML: 0.059 / Cross valid method: THROUGHOUT / ESU R: 0.1 / ESU R Free: 0.103 / Stereochemistry target values: MAXIMUM LIKELIHOOD / Details: HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
Rfactor
Num. reflection
% reflection
Selection details
Rfree
0.19876
1180
4.9 %
RANDOM
Rwork
0.15454
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obs
0.15674
22727
99.97 %
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Solvent computation
Ion probe radii: 0.8 Å / Shrinkage radii: 0.8 Å / VDW probe radii: 1.2 Å / Solvent model: MASK