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- PDB-5v74: Structure of the intact Haliangium ochraceum microcompartment shell -

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Basic information

Entry
Database: PDB / ID: 5v74
TitleStructure of the intact Haliangium ochraceum microcompartment shell
Components
  • (Microcompartments protein) x 2
  • Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
KeywordsSTRUCTURAL PROTEIN / BACTERIAL MICROCOMPARTMENTS
Function / homology
Function and homology information


bacterial microcompartment
Similarity search - Function
: / CsoS1D N-terminal domain / Bacterial microcompartment (BMC) circularly permuted domain / Bacterial microcompartment (BMC) circularly permuted domain profile. / Ethanolamine utilization protein EutN/carboxysome shell vertex protein CcmL / EutN/Ccml superfamily / Ethanolamine utilisation protein EutN/carboxysome / Bacterial microcompartment vertex (BMV) domain profile. / Bacterial microcompartments protein, conserved site / Bacterial microcompartment (BMC) domain signature. ...: / CsoS1D N-terminal domain / Bacterial microcompartment (BMC) circularly permuted domain / Bacterial microcompartment (BMC) circularly permuted domain profile. / Ethanolamine utilization protein EutN/carboxysome shell vertex protein CcmL / EutN/Ccml superfamily / Ethanolamine utilisation protein EutN/carboxysome / Bacterial microcompartment vertex (BMV) domain profile. / Bacterial microcompartments protein, conserved site / Bacterial microcompartment (BMC) domain signature. / CcmK/CsoS1, bacterial microcompartment domain / : / Bacterial microcompartment (BMC) domain profile. / BMC domain / Bacterial microcompartment domain / BMC / CcmK-like superfamily
Similarity search - Domain/homology
Bacterial microcompartment shell vertex protein / Bacterial microcompartment protein homohexamer / Bacterial microcompartment protein trimer-2
Similarity search - Component
Biological speciesHaliangium ochraceum (bacteria)
MethodX-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 3.51015467477 Å
AuthorsSutter, M. / Kerfeld, C.A.
Citation
Journal: Science / Year: 2017
Title: Assembly principles and structure of a 6.5-MDa bacterial microcompartment shell.
Authors: Markus Sutter / Basil Greber / Clement Aussignargues / Cheryl A Kerfeld /
Abstract: Many bacteria contain primitive organelles composed entirely of protein. These bacterial microcompartments share a common architecture of an enzymatic core encapsulated in a selectively permeable ...Many bacteria contain primitive organelles composed entirely of protein. These bacterial microcompartments share a common architecture of an enzymatic core encapsulated in a selectively permeable protein shell; prominent examples include the carboxysome for CO fixation and catabolic microcompartments found in many pathogenic microbes. The shell sequesters enzymatic reactions from the cytosol, analogous to the lipid-based membrane of eukaryotic organelles. Despite available structural information for single building blocks, the principles of shell assembly have remained elusive. We present the crystal structure of an intact shell from , revealing the basic principles of bacterial microcompartment shell construction. Given the conservation among shell proteins of all bacterial microcompartments, these principles apply to functionally diverse organelles and can inform the design and engineering of shells with new functionalities.
#1: Journal: Acta Crystallogr. D Biol. Crystallogr. / Year: 2012
Title: Towards automated crystallographic structure refinement with phenix.refine.
Authors: Afonine, P.V. / Grosse-Kunstleve, R.W. / Echols, N. / Headd, J.J. / Moriarty, N.W. / Mustyakimov, M. / Terwilliger, T.C. / Urzhumtsev, A. / Zwart, P.H. / Adams, P.D.
#2: Journal: Acta Crystallogr D Biol Crystallogr / Year: 2010
Title: PHENIX: a comprehensive Python-based system for macromolecular structure solution.
Authors: Paul D Adams / Pavel V Afonine / Gábor Bunkóczi / Vincent B Chen / Ian W Davis / Nathaniel Echols / Jeffrey J Headd / Li-Wei Hung / Gary J Kapral / Ralf W Grosse-Kunstleve / Airlie J McCoy ...Authors: Paul D Adams / Pavel V Afonine / Gábor Bunkóczi / Vincent B Chen / Ian W Davis / Nathaniel Echols / Jeffrey J Headd / Li-Wei Hung / Gary J Kapral / Ralf W Grosse-Kunstleve / Airlie J McCoy / Nigel W Moriarty / Robert Oeffner / Randy J Read / David C Richardson / Jane S Richardson / Thomas C Terwilliger / Peter H Zwart /
Abstract: Macromolecular X-ray crystallography is routinely applied to understand biological processes at a molecular level. However, significant time and effort are still required to solve and complete many ...Macromolecular X-ray crystallography is routinely applied to understand biological processes at a molecular level. However, significant time and effort are still required to solve and complete many of these structures because of the need for manual interpretation of complex numerical data using many software packages and the repeated use of interactive three-dimensional graphics. PHENIX has been developed to provide a comprehensive system for macromolecular crystallographic structure solution with an emphasis on the automation of all procedures. This has relied on the development of algorithms that minimize or eliminate subjective input, the development of algorithms that automate procedures that are traditionally performed by hand and, finally, the development of a framework that allows a tight integration between the algorithms.
History
DepositionMar 17, 2017Deposition site: RCSB / Processing site: RCSB
Revision 1.0Jun 21, 2017Provider: repository / Type: Initial release
Revision 1.1Jul 5, 2017Group: Database references / Category: citation
Item: _citation.country / _citation.journal_id_ASTM ..._citation.country / _citation.journal_id_ASTM / _citation.journal_id_CSD / _citation.journal_volume / _citation.page_first / _citation.page_last / _citation.pdbx_database_id_PubMed / _citation.title
Revision 1.2Mar 6, 2024Group: Data collection / Database references / Refinement description
Category: chem_comp_atom / chem_comp_bond ...chem_comp_atom / chem_comp_bond / database_2 / struct_ncs_dom_lim
Item: _database_2.pdbx_DOI / _database_2.pdbx_database_accession ..._database_2.pdbx_DOI / _database_2.pdbx_database_accession / _struct_ncs_dom_lim.beg_auth_comp_id / _struct_ncs_dom_lim.beg_label_asym_id / _struct_ncs_dom_lim.beg_label_comp_id / _struct_ncs_dom_lim.beg_label_seq_id / _struct_ncs_dom_lim.end_auth_comp_id / _struct_ncs_dom_lim.end_label_asym_id / _struct_ncs_dom_lim.end_label_comp_id / _struct_ncs_dom_lim.end_label_seq_id
Revision 1.3Apr 3, 2024Group: Refinement description / Category: pdbx_initial_refinement_model

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

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Assembly

Deposited unit
A1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
A2: Microcompartments protein
A3: Microcompartments protein
A4: Microcompartments protein
A5: Microcompartments protein
A6: Microcompartments protein
A7: Microcompartments protein
A8: Microcompartments protein
A9: Microcompartments protein
B1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
B2: Microcompartments protein
B3: Microcompartments protein
B4: Microcompartments protein
B5: Microcompartments protein
B6: Microcompartments protein
B7: Microcompartments protein
B8: Microcompartments protein
B9: Microcompartments protein
C1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
C2: Microcompartments protein
C3: Microcompartments protein
C4: Microcompartments protein
C5: Microcompartments protein
C6: Microcompartments protein
C7: Microcompartments protein
C8: Microcompartments protein
C9: Microcompartments protein
D1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
D2: Microcompartments protein
D3: Microcompartments protein
D4: Microcompartments protein
D5: Microcompartments protein
D6: Microcompartments protein
D7: Microcompartments protein
D8: Microcompartments protein
D9: Microcompartments protein
E1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
E2: Microcompartments protein
E3: Microcompartments protein
E4: Microcompartments protein
E5: Microcompartments protein
E6: Microcompartments protein
E7: Microcompartments protein
E8: Microcompartments protein
E9: Microcompartments protein
F1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
F2: Microcompartments protein
F3: Microcompartments protein
F4: Microcompartments protein
F5: Microcompartments protein
F6: Microcompartments protein
F7: Microcompartments protein
F8: Microcompartments protein
F9: Microcompartments protein
G1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
G2: Microcompartments protein
G3: Microcompartments protein
G4: Microcompartments protein
G5: Microcompartments protein
G6: Microcompartments protein
G7: Microcompartments protein
G8: Microcompartments protein
G9: Microcompartments protein
H1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
H2: Microcompartments protein
H3: Microcompartments protein
H4: Microcompartments protein
H5: Microcompartments protein
H6: Microcompartments protein
H7: Microcompartments protein
H8: Microcompartments protein
H9: Microcompartments protein
I1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
I2: Microcompartments protein
I3: Microcompartments protein
I4: Microcompartments protein
I5: Microcompartments protein
I6: Microcompartments protein
I7: Microcompartments protein
I8: Microcompartments protein
I9: Microcompartments protein
J1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
J2: Microcompartments protein
J3: Microcompartments protein
J4: Microcompartments protein
J5: Microcompartments protein
J6: Microcompartments protein
J7: Microcompartments protein
J8: Microcompartments protein
J9: Microcompartments protein
K1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
K2: Microcompartments protein
K3: Microcompartments protein
K4: Microcompartments protein
K5: Microcompartments protein
K6: Microcompartments protein
K7: Microcompartments protein
K8: Microcompartments protein
K9: Microcompartments protein
L1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
L2: Microcompartments protein
L3: Microcompartments protein
L4: Microcompartments protein
L5: Microcompartments protein
L6: Microcompartments protein
L7: Microcompartments protein
L8: Microcompartments protein
L9: Microcompartments protein
M1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
M2: Microcompartments protein
M3: Microcompartments protein
M4: Microcompartments protein
M5: Microcompartments protein
M6: Microcompartments protein
M7: Microcompartments protein
M8: Microcompartments protein
M9: Microcompartments protein
N1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
N2: Microcompartments protein
N3: Microcompartments protein
N4: Microcompartments protein
N5: Microcompartments protein
N6: Microcompartments protein
N7: Microcompartments protein
N8: Microcompartments protein
N9: Microcompartments protein
O1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
O2: Microcompartments protein
O3: Microcompartments protein
O4: Microcompartments protein
O5: Microcompartments protein
O6: Microcompartments protein
O7: Microcompartments protein
O8: Microcompartments protein
O9: Microcompartments protein
P1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
P2: Microcompartments protein
P3: Microcompartments protein
P4: Microcompartments protein
P5: Microcompartments protein
P6: Microcompartments protein
P7: Microcompartments protein
P8: Microcompartments protein
P9: Microcompartments protein
Q1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
Q2: Microcompartments protein
Q3: Microcompartments protein
Q4: Microcompartments protein
Q5: Microcompartments protein
Q6: Microcompartments protein
Q7: Microcompartments protein
Q8: Microcompartments protein
Q9: Microcompartments protein
R1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
R2: Microcompartments protein
R3: Microcompartments protein
R4: Microcompartments protein
R5: Microcompartments protein
R6: Microcompartments protein
R7: Microcompartments protein
R8: Microcompartments protein
R9: Microcompartments protein
S1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
S2: Microcompartments protein
S3: Microcompartments protein
S4: Microcompartments protein
S5: Microcompartments protein
S6: Microcompartments protein
S7: Microcompartments protein
S8: Microcompartments protein
S9: Microcompartments protein
T1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
T2: Microcompartments protein
T3: Microcompartments protein
T4: Microcompartments protein
T5: Microcompartments protein
T6: Microcompartments protein
T7: Microcompartments protein
T8: Microcompartments protein
T9: Microcompartments protein
U1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
U2: Microcompartments protein
U3: Microcompartments protein
U4: Microcompartments protein
U5: Microcompartments protein
U6: Microcompartments protein
U7: Microcompartments protein
U8: Microcompartments protein
U9: Microcompartments protein
V1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
V2: Microcompartments protein
V3: Microcompartments protein
V4: Microcompartments protein
V5: Microcompartments protein
V6: Microcompartments protein
V7: Microcompartments protein
V8: Microcompartments protein
V9: Microcompartments protein
W1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
W2: Microcompartments protein
W3: Microcompartments protein
W4: Microcompartments protein
W5: Microcompartments protein
W6: Microcompartments protein
W7: Microcompartments protein
W8: Microcompartments protein
W9: Microcompartments protein
X1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
X2: Microcompartments protein
X3: Microcompartments protein
X4: Microcompartments protein
X5: Microcompartments protein
X6: Microcompartments protein
X7: Microcompartments protein
X8: Microcompartments protein
X9: Microcompartments protein
Y1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
Y2: Microcompartments protein
Y3: Microcompartments protein
Y4: Microcompartments protein
Y5: Microcompartments protein
Y6: Microcompartments protein
Y7: Microcompartments protein
Y8: Microcompartments protein
Y9: Microcompartments protein
Z1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
Z2: Microcompartments protein
Z3: Microcompartments protein
Z4: Microcompartments protein
Z5: Microcompartments protein
Z6: Microcompartments protein
Z7: Microcompartments protein
Z8: Microcompartments protein
Z9: Microcompartments protein
11: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
12: Microcompartments protein
13: Microcompartments protein
14: Microcompartments protein
15: Microcompartments protein
16: Microcompartments protein
17: Microcompartments protein
18: Microcompartments protein
19: Microcompartments protein
21: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
22: Microcompartments protein
23: Microcompartments protein
24: Microcompartments protein
25: Microcompartments protein
26: Microcompartments protein
27: Microcompartments protein
28: Microcompartments protein
29: Microcompartments protein
31: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
32: Microcompartments protein
33: Microcompartments protein
34: Microcompartments protein
35: Microcompartments protein
36: Microcompartments protein
37: Microcompartments protein
38: Microcompartments protein
39: Microcompartments protein
41: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
42: Microcompartments protein
43: Microcompartments protein
44: Microcompartments protein
45: Microcompartments protein
46: Microcompartments protein
47: Microcompartments protein
48: Microcompartments protein
49: Microcompartments protein


Theoretical massNumber of molelcules
Total (without water)3,493,047270
Polymers3,493,047270
Non-polymers00
Water00
1
A1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
A2: Microcompartments protein
A3: Microcompartments protein
A4: Microcompartments protein
A5: Microcompartments protein
A6: Microcompartments protein
A7: Microcompartments protein
A8: Microcompartments protein
A9: Microcompartments protein
B1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
B2: Microcompartments protein
B3: Microcompartments protein
B4: Microcompartments protein
B5: Microcompartments protein
B6: Microcompartments protein
B7: Microcompartments protein
B8: Microcompartments protein
B9: Microcompartments protein
C1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
C2: Microcompartments protein
C3: Microcompartments protein
C4: Microcompartments protein
C5: Microcompartments protein
C6: Microcompartments protein
C7: Microcompartments protein
C8: Microcompartments protein
C9: Microcompartments protein
D1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
D2: Microcompartments protein
D3: Microcompartments protein
D4: Microcompartments protein
D5: Microcompartments protein
D6: Microcompartments protein
D7: Microcompartments protein
D8: Microcompartments protein
D9: Microcompartments protein
E1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
E2: Microcompartments protein
E3: Microcompartments protein
E4: Microcompartments protein
E5: Microcompartments protein
E6: Microcompartments protein
E7: Microcompartments protein
E8: Microcompartments protein
E9: Microcompartments protein
F1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
F2: Microcompartments protein
F3: Microcompartments protein
F4: Microcompartments protein
F5: Microcompartments protein
F6: Microcompartments protein
F7: Microcompartments protein
F8: Microcompartments protein
F9: Microcompartments protein
G1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
G2: Microcompartments protein
G3: Microcompartments protein
G4: Microcompartments protein
G5: Microcompartments protein
G6: Microcompartments protein
G7: Microcompartments protein
G8: Microcompartments protein
G9: Microcompartments protein
H1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
H2: Microcompartments protein
H3: Microcompartments protein
H4: Microcompartments protein
H5: Microcompartments protein
H6: Microcompartments protein
H7: Microcompartments protein
H8: Microcompartments protein
H9: Microcompartments protein
I1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
I2: Microcompartments protein
I3: Microcompartments protein
I4: Microcompartments protein
I5: Microcompartments protein
I6: Microcompartments protein
I7: Microcompartments protein
I8: Microcompartments protein
I9: Microcompartments protein
J1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
J2: Microcompartments protein
J3: Microcompartments protein
J4: Microcompartments protein
J5: Microcompartments protein
J6: Microcompartments protein
J7: Microcompartments protein
J8: Microcompartments protein
J9: Microcompartments protein
K1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
K2: Microcompartments protein
K3: Microcompartments protein
K4: Microcompartments protein
K5: Microcompartments protein
K6: Microcompartments protein
K7: Microcompartments protein
K8: Microcompartments protein
K9: Microcompartments protein
L1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
L2: Microcompartments protein
L3: Microcompartments protein
L4: Microcompartments protein
L5: Microcompartments protein
L6: Microcompartments protein
L7: Microcompartments protein
L8: Microcompartments protein
L9: Microcompartments protein
M1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
M2: Microcompartments protein
M3: Microcompartments protein
M4: Microcompartments protein
M5: Microcompartments protein
M6: Microcompartments protein
M7: Microcompartments protein
M8: Microcompartments protein
M9: Microcompartments protein
N1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
N2: Microcompartments protein
N3: Microcompartments protein
N4: Microcompartments protein
N5: Microcompartments protein
N6: Microcompartments protein
N7: Microcompartments protein
N8: Microcompartments protein
N9: Microcompartments protein
O1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
O2: Microcompartments protein
O3: Microcompartments protein
O4: Microcompartments protein
O5: Microcompartments protein
O6: Microcompartments protein
O7: Microcompartments protein
O8: Microcompartments protein
O9: Microcompartments protein
P1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
P2: Microcompartments protein
P3: Microcompartments protein
P4: Microcompartments protein
P5: Microcompartments protein
P6: Microcompartments protein
P7: Microcompartments protein
P8: Microcompartments protein
P9: Microcompartments protein
Q1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
Q2: Microcompartments protein
Q3: Microcompartments protein
Q4: Microcompartments protein
Q5: Microcompartments protein
Q6: Microcompartments protein
Q7: Microcompartments protein
Q8: Microcompartments protein
Q9: Microcompartments protein
R1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
R2: Microcompartments protein
R3: Microcompartments protein
R4: Microcompartments protein
R5: Microcompartments protein
R6: Microcompartments protein
R7: Microcompartments protein
R8: Microcompartments protein
R9: Microcompartments protein
S1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
S2: Microcompartments protein
S3: Microcompartments protein
S4: Microcompartments protein
S5: Microcompartments protein
S6: Microcompartments protein
S7: Microcompartments protein
S8: Microcompartments protein
S9: Microcompartments protein
T1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
T2: Microcompartments protein
T3: Microcompartments protein
T4: Microcompartments protein
T5: Microcompartments protein
T6: Microcompartments protein
T7: Microcompartments protein
T8: Microcompartments protein
T9: Microcompartments protein
U1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
U2: Microcompartments protein
U3: Microcompartments protein
U4: Microcompartments protein
U5: Microcompartments protein
U6: Microcompartments protein
U7: Microcompartments protein
U8: Microcompartments protein
U9: Microcompartments protein
V1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
V2: Microcompartments protein
V3: Microcompartments protein
V4: Microcompartments protein
V5: Microcompartments protein
V6: Microcompartments protein
V7: Microcompartments protein
V8: Microcompartments protein
V9: Microcompartments protein
W1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
W2: Microcompartments protein
W3: Microcompartments protein
W4: Microcompartments protein
W5: Microcompartments protein
W6: Microcompartments protein
W7: Microcompartments protein
W8: Microcompartments protein
W9: Microcompartments protein
X1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
X2: Microcompartments protein
X3: Microcompartments protein
X4: Microcompartments protein
X5: Microcompartments protein
X6: Microcompartments protein
X7: Microcompartments protein
X8: Microcompartments protein
X9: Microcompartments protein
Y1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
Y2: Microcompartments protein
Y3: Microcompartments protein
Y4: Microcompartments protein
Y5: Microcompartments protein
Y6: Microcompartments protein
Y7: Microcompartments protein
Y8: Microcompartments protein
Y9: Microcompartments protein
Z1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
Z2: Microcompartments protein
Z3: Microcompartments protein
Z4: Microcompartments protein
Z5: Microcompartments protein
Z6: Microcompartments protein
Z7: Microcompartments protein
Z8: Microcompartments protein
Z9: Microcompartments protein
11: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
12: Microcompartments protein
13: Microcompartments protein
14: Microcompartments protein
15: Microcompartments protein
16: Microcompartments protein
17: Microcompartments protein
18: Microcompartments protein
19: Microcompartments protein
21: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
22: Microcompartments protein
23: Microcompartments protein
24: Microcompartments protein
25: Microcompartments protein
26: Microcompartments protein
27: Microcompartments protein
28: Microcompartments protein
29: Microcompartments protein
31: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
32: Microcompartments protein
33: Microcompartments protein
34: Microcompartments protein
35: Microcompartments protein
36: Microcompartments protein
37: Microcompartments protein
38: Microcompartments protein
39: Microcompartments protein
41: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
42: Microcompartments protein
43: Microcompartments protein
44: Microcompartments protein
45: Microcompartments protein
46: Microcompartments protein
47: Microcompartments protein
48: Microcompartments protein
49: Microcompartments protein

A1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
A2: Microcompartments protein
A3: Microcompartments protein
A4: Microcompartments protein
A5: Microcompartments protein
A6: Microcompartments protein
A7: Microcompartments protein
A8: Microcompartments protein
A9: Microcompartments protein
B1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
B2: Microcompartments protein
B3: Microcompartments protein
B4: Microcompartments protein
B5: Microcompartments protein
B6: Microcompartments protein
B7: Microcompartments protein
B8: Microcompartments protein
B9: Microcompartments protein
C1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
C2: Microcompartments protein
C3: Microcompartments protein
C4: Microcompartments protein
C5: Microcompartments protein
C6: Microcompartments protein
C7: Microcompartments protein
C8: Microcompartments protein
C9: Microcompartments protein
D1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
D2: Microcompartments protein
D3: Microcompartments protein
D4: Microcompartments protein
D5: Microcompartments protein
D6: Microcompartments protein
D7: Microcompartments protein
D8: Microcompartments protein
D9: Microcompartments protein
E1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
E2: Microcompartments protein
E3: Microcompartments protein
E4: Microcompartments protein
E5: Microcompartments protein
E6: Microcompartments protein
E7: Microcompartments protein
E8: Microcompartments protein
E9: Microcompartments protein
F1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
F2: Microcompartments protein
F3: Microcompartments protein
F4: Microcompartments protein
F5: Microcompartments protein
F6: Microcompartments protein
F7: Microcompartments protein
F8: Microcompartments protein
F9: Microcompartments protein
G1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
G2: Microcompartments protein
G3: Microcompartments protein
G4: Microcompartments protein
G5: Microcompartments protein
G6: Microcompartments protein
G7: Microcompartments protein
G8: Microcompartments protein
G9: Microcompartments protein
H1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
H2: Microcompartments protein
H3: Microcompartments protein
H4: Microcompartments protein
H5: Microcompartments protein
H6: Microcompartments protein
H7: Microcompartments protein
H8: Microcompartments protein
H9: Microcompartments protein
I1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
I2: Microcompartments protein
I3: Microcompartments protein
I4: Microcompartments protein
I5: Microcompartments protein
I6: Microcompartments protein
I7: Microcompartments protein
I8: Microcompartments protein
I9: Microcompartments protein
J1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
J2: Microcompartments protein
J3: Microcompartments protein
J4: Microcompartments protein
J5: Microcompartments protein
J6: Microcompartments protein
J7: Microcompartments protein
J8: Microcompartments protein
J9: Microcompartments protein
K1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
K2: Microcompartments protein
K3: Microcompartments protein
K4: Microcompartments protein
K5: Microcompartments protein
K6: Microcompartments protein
K7: Microcompartments protein
K8: Microcompartments protein
K9: Microcompartments protein
L1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
L2: Microcompartments protein
L3: Microcompartments protein
L4: Microcompartments protein
L5: Microcompartments protein
L6: Microcompartments protein
L7: Microcompartments protein
L8: Microcompartments protein
L9: Microcompartments protein
M1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
M2: Microcompartments protein
M3: Microcompartments protein
M4: Microcompartments protein
M5: Microcompartments protein
M6: Microcompartments protein
M7: Microcompartments protein
M8: Microcompartments protein
M9: Microcompartments protein
N1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
N2: Microcompartments protein
N3: Microcompartments protein
N4: Microcompartments protein
N5: Microcompartments protein
N6: Microcompartments protein
N7: Microcompartments protein
N8: Microcompartments protein
N9: Microcompartments protein
O1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
O2: Microcompartments protein
O3: Microcompartments protein
O4: Microcompartments protein
O5: Microcompartments protein
O6: Microcompartments protein
O7: Microcompartments protein
O8: Microcompartments protein
O9: Microcompartments protein
P1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
P2: Microcompartments protein
P3: Microcompartments protein
P4: Microcompartments protein
P5: Microcompartments protein
P6: Microcompartments protein
P7: Microcompartments protein
P8: Microcompartments protein
P9: Microcompartments protein
Q1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
Q2: Microcompartments protein
Q3: Microcompartments protein
Q4: Microcompartments protein
Q5: Microcompartments protein
Q6: Microcompartments protein
Q7: Microcompartments protein
Q8: Microcompartments protein
Q9: Microcompartments protein
R1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
R2: Microcompartments protein
R3: Microcompartments protein
R4: Microcompartments protein
R5: Microcompartments protein
R6: Microcompartments protein
R7: Microcompartments protein
R8: Microcompartments protein
R9: Microcompartments protein
S1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
S2: Microcompartments protein
S3: Microcompartments protein
S4: Microcompartments protein
S5: Microcompartments protein
S6: Microcompartments protein
S7: Microcompartments protein
S8: Microcompartments protein
S9: Microcompartments protein
T1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
T2: Microcompartments protein
T3: Microcompartments protein
T4: Microcompartments protein
T5: Microcompartments protein
T6: Microcompartments protein
T7: Microcompartments protein
T8: Microcompartments protein
T9: Microcompartments protein
U1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
U2: Microcompartments protein
U3: Microcompartments protein
U4: Microcompartments protein
U5: Microcompartments protein
U6: Microcompartments protein
U7: Microcompartments protein
U8: Microcompartments protein
U9: Microcompartments protein
V1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
V2: Microcompartments protein
V3: Microcompartments protein
V4: Microcompartments protein
V5: Microcompartments protein
V6: Microcompartments protein
V7: Microcompartments protein
V8: Microcompartments protein
V9: Microcompartments protein
W1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
W2: Microcompartments protein
W3: Microcompartments protein
W4: Microcompartments protein
W5: Microcompartments protein
W6: Microcompartments protein
W7: Microcompartments protein
W8: Microcompartments protein
W9: Microcompartments protein
X1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
X2: Microcompartments protein
X3: Microcompartments protein
X4: Microcompartments protein
X5: Microcompartments protein
X6: Microcompartments protein
X7: Microcompartments protein
X8: Microcompartments protein
X9: Microcompartments protein
Y1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
Y2: Microcompartments protein
Y3: Microcompartments protein
Y4: Microcompartments protein
Y5: Microcompartments protein
Y6: Microcompartments protein
Y7: Microcompartments protein
Y8: Microcompartments protein
Y9: Microcompartments protein
Z1: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
Z2: Microcompartments protein
Z3: Microcompartments protein
Z4: Microcompartments protein
Z5: Microcompartments protein
Z6: Microcompartments protein
Z7: Microcompartments protein
Z8: Microcompartments protein
Z9: Microcompartments protein
11: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
12: Microcompartments protein
13: Microcompartments protein
14: Microcompartments protein
15: Microcompartments protein
16: Microcompartments protein
17: Microcompartments protein
18: Microcompartments protein
19: Microcompartments protein
21: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
22: Microcompartments protein
23: Microcompartments protein
24: Microcompartments protein
25: Microcompartments protein
26: Microcompartments protein
27: Microcompartments protein
28: Microcompartments protein
29: Microcompartments protein
31: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
32: Microcompartments protein
33: Microcompartments protein
34: Microcompartments protein
35: Microcompartments protein
36: Microcompartments protein
37: Microcompartments protein
38: Microcompartments protein
39: Microcompartments protein
41: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
42: Microcompartments protein
43: Microcompartments protein
44: Microcompartments protein
45: Microcompartments protein
46: Microcompartments protein
47: Microcompartments protein
48: Microcompartments protein
49: Microcompartments protein


Theoretical massNumber of molelcules
Total (without water)6,986,094540
Polymers6,986,094540
Non-polymers00
Water0
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
crystal symmetry operation3_455-x-1,y,-z+1/21
Unit cell
Length a, b, c (Å)394.340, 638.090, 642.150
Angle α, β, γ (deg.)90.000, 90.000, 90.000
Int Tables number20
Space group name H-MC2221
Space group name HallC2c2
Symmetry operation#1: x,y,z
#2: x,-y,-z
#3: -x,y,-z+1/2
#4: -x,-y,z+1/2
#5: x+1/2,y+1/2,z
#6: x+1/2,-y+1/2,-z
#7: -x+1/2,y+1/2,-z+1/2
#8: -x+1/2,-y+1/2,z+1/2
Noncrystallographic symmetry (NCS)NCS domain:
IDEns-ID
11
21
31
41
51
61
71
81
91
101
111
121
131
141
151
161
171
181
191
201
211
221
231
241
251
261
271
281
291
301
12
22
32
42
52
62
72
82
92
102
112
122
132
142
152
162
172
182
192
202
212
222
232
242
252
262
272
282
292
302
13
23
33
43
53
63
73
83
93
103
113
123
133
143
153
163
173
183
193
203
213
223
233
243
253
263
273
283
293
303
14
24
34
44
54
64
74
84
94
104
114
124
134
144
154
164
174
184
194
204
214
224
234
244
254
264
274
284
294
304
15
25
35
45
55
65
75
85
95
105
115
125
135
145
155
165
175
185
195
205
215
225
235
245
255
265
275
285
295
305
16
26
36
46
56
66
76
86
96
106
116
126
136
146
156
166
176
186
196
206
216
226
236
246
256
266
276
286
296
306
17
27
37
47
57
67
77
87
97
107
117
127
137
147
157
167
177
187
197
207
217
227
237
247
257
267
277
287
297
307
18
28
38
48
58
68
78
88
98
108
118
128
138
148
158
168
178
188
198
208
218
228
238
248
258
268
278
288
298
308
19
29
39
49
59
69
79
89
99
109
119
129
139
149
159
169
179
189
199
209
219
229
239
249
259
269
279
289
299
309

NCS domain segments:

Component-ID: 1

Dom-IDEns-IDBeg auth comp-IDBeg label comp-IDEnd auth comp-IDEnd label comp-IDSelection detailsAuth asym-IDLabel asym-IDAuth seq-IDLabel seq-ID
11ASPASPPROPRO(chain 'A5' and resid 3 through 93)A5E3 - 933 - 93
21ASPASPPROPRO(chain '15' and resid 3 through 93)15EI3 - 933 - 93
31ASPASPPROPRO(chain '25' and resid 3 through 93)25NI3 - 933 - 93
41ASPASPPROPRO(chain '35' and resid 3 through 93)35WI3 - 933 - 93
51ASPASPPROPRO(chain '45' and resid 3 through 93)45FJ3 - 933 - 93
61ASPASPPROPRO(chain 'B5' and resid 3 through 93)B5N3 - 933 - 93
71ASPASPPROPRO(chain 'C5' and resid 3 through 93)C5W3 - 933 - 93
81ASPASPPROPRO(chain 'D5' and resid 3 through 93)D5FA3 - 933 - 93
91ASPASPPROPRO(chain 'E5' and resid 3 through 93)E5OA3 - 933 - 93
101ASPASPPROPRO(chain 'F5' and resid 3 through 93)F5XA3 - 933 - 93
111ASPASPPROPROchain 'G5'G5GB3 - 933 - 93
121ASPASPPROPROchain 'H5'H5PB3 - 933 - 93
131ASPASPPROPRO(chain 'I5' and resid 3 through 93)I5YB3 - 933 - 93
141ASPASPPROPROchain 'J5'J5HC3 - 933 - 93
151ASPASPPROPRO(chain 'K5' and resid 3 through 93)K5QC3 - 933 - 93
161ASPASPPROPRO(chain 'L5' and resid 3 through 93)L5ZC3 - 933 - 93
171ASPASPPROPRO(chain 'M5' and resid 3 through 93)M5ID3 - 933 - 93
181ASPASPPROPRO(chain 'N5' and resid 3 through 93)N5RD3 - 933 - 93
191ASPASPPROPRO(chain 'O5' and resid 3 through 93)O5AE3 - 933 - 93
201ASPASPPROPRO(chain 'P5' and resid 3 through 93)P5JE3 - 933 - 93
211ASPASPPROPRO(chain 'Q5' and resid 3 through 93)Q5SE3 - 933 - 93
221ASPASPPROPRO(chain 'R5' and resid 3 through 93)R5BF3 - 933 - 93
231ASPASPPROPRO(chain 'S5' and resid 3 through 93)S5KF3 - 933 - 93
241ASPASPPROPRO(chain 'T5' and resid 3 through 93)T5TF3 - 933 - 93
251ASPASPPROPRO(chain 'U5' and resid 3 through 93)U5CG3 - 933 - 93
261ASPASPPROPRO(chain 'V5' and resid 3 through 93)V5LG3 - 933 - 93
271ASPASPPROPRO(chain 'W5' and resid 3 through 93)W5UG3 - 933 - 93
281ASPASPPROPRO(chain 'X5' and resid 3 through 93)X5DH3 - 933 - 93
291ASPASPPROPRO(chain 'Y5' and resid 2 through 92)Y5MH2 - 923 - 93
301ASPASPPROPRO(chain 'Z5' and resid 3 through 93)Z5VH3 - 933 - 93
12ALAALAPROPRO(chain 'A7' and resid 4 through 93)A7G4 - 934 - 93
22ALAALAPROPRO(chain '17' and resid 4 through 93)17GI4 - 934 - 93
32ALAALAPROPRO(chain '27' and resid 4 through 93)27PI4 - 934 - 93
42ALAALAPROPRO(chain '37' and resid 4 through 93)37YI4 - 934 - 93
52ALAALAPROPRO(chain '47' and resid 4 through 93)47HJ4 - 934 - 93
62ALAALAPROPRO(chain 'B7' and resid 4 through 93)B7P4 - 934 - 93
72ALAALAPROPRO(chain 'C7' and resid 4 through 93)C7Y4 - 934 - 93
82ALAALAPROPRO(chain 'D7' and resid 4 through 93)D7HA4 - 934 - 93
92ALAALAPROPRO(chain 'E7' and resid 4 through 93)E7QA4 - 934 - 93
102ALAALAPROPRO(chain 'F7' and resid 4 through 93)F7ZA4 - 934 - 93
112ALAALAPROPRO(chain 'G7' and resid 4 through 93)G7IB4 - 934 - 93
122ALAALAPROPRO(chain 'H7' and resid 4 through 93)H7RB4 - 934 - 93
132ALAALAPROPRO(chain 'I7' and resid 4 through 93)I7AC4 - 934 - 93
142ALAALAPROPRO(chain 'J7' and resid 4 through 93)J7JC4 - 934 - 93
152ALAALAPROPRO(chain 'K7' and resid 4 through 93)K7SC4 - 934 - 93
162ALAALAPROPRO(chain 'L7' and resid 4 through 93)L7BD4 - 934 - 93
172ALAALAPROPRO(chain 'M7' and resid 4 through 93)M7KD4 - 934 - 93
182ALAALAPROPRO(chain 'N7' and resid 4 through 93)N7TD4 - 934 - 93
192ALAALAPROPRO(chain 'O7' and resid 4 through 93)O7CE4 - 934 - 93
202ALAALAPROPRO(chain 'P7' and resid 2 through 91)P7LE2 - 914 - 93
212ALAALAPROPRO(chain 'Q7' and resid 4 through 93)Q7UE4 - 934 - 93
222ALAALAPROPRO(chain 'R7' and resid 4 through 93)R7DF4 - 934 - 93
232ALAALAPROPRO(chain 'S7' and resid 4 through 93)S7MF4 - 934 - 93
242ALAALAPROPRO(chain 'T7' and resid 4 through 93)T7VF4 - 934 - 93
252ALAALAPROPRO(chain 'U7' and resid 4 through 93)U7EG4 - 934 - 93
262ALAALAPROPRO(chain 'V7' and resid 4 through 93)V7NG4 - 934 - 93
272ALAALAPROPRO(chain 'W7' and resid 4 through 93)W7WG4 - 934 - 93
282ALAALAPROPRO(chain 'X7' and resid 4 through 93)X7FH4 - 934 - 93
292ALAALAPROPRO(chain 'Y7' and resid 4 through 93)Y7OH4 - 934 - 93
302ALAALAPROPRO(chain 'Z7' and resid 4 through 93)Z7XH4 - 934 - 93
13METMETARGARG(chain 'A1' and resid 1 through 94)A1A1 - 941 - 94
23METMETARGARG(chain '11' and resid 1 through 94)11AI1 - 941 - 94
33METMETARGARG(chain '21' and resid 1 through 94)21JI1 - 941 - 94
43METMETARGARGchain '31'31SI1 - 941 - 94
53METMETARGARG(chain '41' and resid 1 through 94)41BJ1 - 941 - 94
63METMETARGARG(chain 'B1' and resid 1 through 94)B1J1 - 941 - 94
73METMETARGARG(chain 'C1' and resid 1 through 94)C1S1 - 941 - 94
83METMETARGARG(chain 'D1' and resid 1 through 94)D1BA1 - 941 - 94
93METMETARGARG(chain 'E1' and resid 1 through 94)E1KA1 - 941 - 94
103METMETARGARG(chain 'F1' and resid 1 through 94)F1TA1 - 941 - 94
113METMETARGARG(chain 'G1' and resid 1 through 94)G1CB1 - 941 - 94
123METMETARGARG(chain 'H1' and resid 1 through 94)H1LB1 - 941 - 94
133METMETARGARG(chain 'I1' and resid 1 through 94)I1UB1 - 941 - 94
143METMETARGARG(chain 'J1' and resid 1 through 94)J1DC1 - 941 - 94
153METMETARGARG(chain 'K1' and resid 1 through 94)K1MC1 - 941 - 94
163METMETARGARG(chain 'L1' and resid 1 through 94)L1VC1 - 941 - 94
173METMETARGARG(chain 'M1' and resid 1 through 94)M1ED1 - 941 - 94
183METMETARGARG(chain 'N1' and resid 1 through 94)N1ND1 - 941 - 94
193METMETARGARG(chain 'O1' and resid 1 through 94)O1WD1 - 941 - 94
203METMETARGARG(chain 'P1' and resid 1 through 94)P1FE1 - 941 - 94
213METMETARGARG(chain 'Q1' and resid 1 through 94)Q1OE1 - 941 - 94
223METMETARGARG(chain 'R1' and resid 1 through 94)R1XE1 - 941 - 94
233METMETARGARG(chain 'S1' and resid 1 through 94)S1GF1 - 941 - 94
243METMETARGARG(chain 'T1' and resid 1 through 94)T1PF1 - 941 - 94
253METMETARGARG(chain 'U1' and resid 1 through 94)U1YF1 - 941 - 94
263METMETARGARG(chain 'V1' and resid 1 through 94)V1HG1 - 941 - 94
273METMETARGARG(chain 'W1' and resid 1 through 94)W1QG1 - 941 - 94
283METMETARGARG(chain 'X1' and resid 1 through 94)X1ZG1 - 941 - 94
293METMETARGARG(chain 'Y1' and resid 1 through 94)Y1IH1 - 941 - 94
303METMETARGARG(chain 'Z1' and resid 1 through 94)Z1RH1 - 941 - 94
14ALAALAPROPRO(chain 'A4' and resid 2 through 93)A4D2 - 932 - 93
24ALAALAPROPRO(chain '14' and resid 2 through 93)14DI2 - 932 - 93
34ALAALAPROPRO(chain '24' and resid 2 through 93)24MI2 - 932 - 93
44ALAALAPROPRO(chain '34' and resid 2 through 93)34VI2 - 932 - 93
54ALAALAPROPRO(chain '44' and resid 2 through 93)44EJ2 - 932 - 93
64ALAALAPROPROchain 'B4'B4M2 - 932 - 93
74ALAALAPROPROchain 'C4'C4V2 - 932 - 93
84ALAALAPROPROchain 'D4'D4EA2 - 932 - 93
94ALAALAPROPRO(chain 'E4' and resid 2 through 93)E4NA2 - 932 - 93
104ALAALAPROPROchain 'F4'F4WA2 - 932 - 93
114ALAALAPROPROchain 'G4'G4FB2 - 932 - 93
124ALAALAPROPRO(chain 'H4' and resid 2 through 93)H4OB2 - 932 - 93
134ALAALAPROPROchain 'I4'I4XB2 - 932 - 93
144ALAALAPROPROchain 'J4'J4GC2 - 932 - 93
154ALAALAPROPROchain 'K4'K4PC2 - 932 - 93
164ALAALAPROPROchain 'L4'L4YC2 - 932 - 93
174ALAALAPROPROchain 'M4'M4HD2 - 932 - 93
184ALAALAPROPROchain 'N4'N4QD2 - 932 - 93
194ALAALAPROPRO(chain 'O4' and resid 2 through 93)O4ZD2 - 932 - 93
204ALAALAPROPRO(chain 'P4' and resid 2 through 93)P4IE2 - 932 - 93
214ALAALAPROPRO(chain 'Q4' and resid 2 through 93)Q4RE2 - 932 - 93
224ALAALAPROPRO(chain 'R4' and resid 2 through 93)R4AF2 - 932 - 93
234ALAALAPROPRO(chain 'S4' and resid 2 through 93)S4JF2 - 932 - 93
244ALAALAPROPRO(chain 'T4' and resid 2 through 93)T4SF2 - 932 - 93
254ALAALAPROPRO(chain 'U4' and resid 2 through 93)U4BG2 - 932 - 93
264ALAALAPROPRO(chain 'V4' and resid 2 through 93)V4KG2 - 932 - 93
274ALAALAPROPRO(chain 'W4' and resid 2 through 93)W4TG2 - 932 - 93
284ALAALAPROPRO(chain 'X4' and resid 2 through 93)X4CH2 - 932 - 93
294ALAALAPROPRO(chain 'Y4' and resid 2 through 93)Y4LH2 - 932 - 93
304ALAALAPROPRO(chain 'Z4' and resid 2 through 93)Z4UH2 - 932 - 93
15ASPASPPROPRO(chain 'A6' and resid 3 through 93)A6F3 - 933 - 93
25ASPASPPROPRO(chain '16' and resid 3 through 93)16FI3 - 933 - 93
35ASPASPPROPRO(chain '26' and resid 3 through 93)26OI3 - 933 - 93
45ASPASPPROPRO(chain '36' and resid 3 through 93)36XI3 - 933 - 93
55ASPASPPROPRO(chain '46' and resid 3 through 93)46GJ3 - 933 - 93
65ASPASPPROPRO(chain 'B6' and resid 3 through 93)B6O3 - 933 - 93
75ASPASPPROPRO(chain 'C6' and resid 3 through 93)C6X3 - 933 - 93
85ASPASPPROPRO(chain 'D6' and resid 3 through 93)D6GA3 - 933 - 93
95ASPASPPROPRO(chain 'E6' and resid 3 through 93)E6PA3 - 933 - 93
105ASPASPPROPRO(chain 'F6' and resid 3 through 93)F6YA3 - 933 - 93
115ASPASPPROPRO(chain 'G6' and resid 3 through 93)G6HB3 - 933 - 93
125ASPASPPROPRO(chain 'H6' and resid 3 through 93)H6QB3 - 933 - 93
135ASPASPPROPRO(chain 'I6' and resid 3 through 93)I6ZB3 - 933 - 93
145ASPASPPROPRO(chain 'J6' and resid 3 through 93)J6IC3 - 933 - 93
155ASPASPPROPRO(chain 'K6' and resid 3 through 93)K6RC3 - 933 - 93
165ASPASPPROPRO(chain 'L6' and resid 3 through 93)L6AD3 - 933 - 93
175ASPASPPROPROchain 'M6'M6JD3 - 933 - 93
185ASPASPPROPROchain 'N6'N6SD3 - 933 - 93
195ASPASPPROPRO(chain 'O6' and resid 3 through 93)O6BE3 - 933 - 93
205ASPASPPROPRO(chain 'P6' and resid 3 through 93)P6KE3 - 933 - 93
215ASPASPPROPRO(chain 'Q6' and resid 3 through 93)Q6TE3 - 933 - 93
225ASPASPPROPRO(chain 'R6' and resid 3 through 93)R6CF3 - 933 - 93
235ASPASPPROPRO(chain 'S6' and resid 3 through 93)S6LF3 - 933 - 93
245ASPASPPROPRO(chain 'T6' and resid 3 through 93)T6UF3 - 933 - 93
255ASPASPPROPRO(chain 'U6' and resid 3 through 93)U6DG3 - 933 - 93
265ASPASPPROPRO(chain 'V6' and resid 3 through 93)V6MG3 - 933 - 93
275ASPASPPROPRO(chain 'W6' and resid 3 through 93)W6VG3 - 933 - 93
285ASPASPPROPRO(chain 'X6' and resid 3 through 93)X6EH3 - 933 - 93
295ASPASPPROPRO(chain 'Y6' and resid 3 through 93)Y6NH3 - 933 - 93
305ASPASPPROPRO(chain 'Z6' and resid 3 through 93)Z6WH3 - 933 - 93
16ILEILEVALVALchain 'A8'A8H3 - 2043 - 204
26ILEILEVALVALchain '18'18HI3 - 2043 - 204
36ILEILEVALVALchain '28'28QI3 - 2043 - 204
46ILEILEVALVALchain '38'38ZI3 - 2043 - 204
56ILEILEVALVALchain '48'48IJ3 - 2043 - 204
66ILEILEVALVALchain 'B8'B8Q3 - 2043 - 204
76ILEILEVALVALchain 'C8'C8Z3 - 2043 - 204
86ILEILEVALVALchain 'D8'D8IA3 - 2043 - 204
96ILEILEVALVALchain 'E8'E8RA3 - 2043 - 204
106ILEILEVALVALchain 'F8'F8AB3 - 2043 - 204
116ILEILEVALVALchain 'G8'G8JB3 - 2043 - 204
126ILEILEVALVALchain 'H8'H8SB3 - 2043 - 204
136ILEILEVALVALchain 'I8'I8BC3 - 2043 - 204
146ILEILEVALVALchain 'J8'J8KC3 - 2043 - 204
156ILEILEVALVALchain 'K8'K8TC3 - 2043 - 204
166ILEILEVALVALchain 'L8'L8CD3 - 2043 - 204
176ILEILEVALVALchain 'M8'M8LD3 - 2043 - 204
186ILEILEVALVALchain 'N8'N8UD3 - 2043 - 204
196ILEILEVALVALchain 'O8'O8DE3 - 2043 - 204
206ILEILEVALVALchain 'P8'P8ME3 - 2043 - 204
216ILEILEVALVALchain 'Q8'Q8VE3 - 2043 - 204
226ILEILEVALVALchain 'R8'R8EF3 - 2043 - 204
236ILEILEVALVALchain 'S8'S8NF3 - 2043 - 204
246ILEILEVALVALchain 'T8'T8WF3 - 2043 - 204
256ILEILEVALVALchain 'U8'U8FG3 - 2043 - 204
266ILEILEVALVALchain 'V8'V8OG3 - 2043 - 204
276ILEILEVALVALchain 'W8'W8XG3 - 2043 - 204
286ILEILEVALVALchain 'X8'X8GH3 - 2043 - 204
296ILEILEVALVALchain 'Y8'Y8PH3 - 2043 - 204
306ILEILEVALVALchain 'Z8'Z8YH3 - 2043 - 204
17ILEILEVALVALchain 'A9'A9I3 - 2043 - 204
27ILEILEVALVALchain '19'19II3 - 2043 - 204
37ILEILEVALVALchain '29'29RI3 - 2043 - 204
47ILEILEVALVALchain '39'39AJ3 - 2043 - 204
57ILEILEVALVALchain '49'49JJ3 - 2043 - 204
67ILEILEVALVALchain 'B9'B9R3 - 2043 - 204
77ILEILEVALVALchain 'C9'C9AA3 - 2043 - 204
87ILEILEVALVALchain 'D9'D9JA3 - 2043 - 204
97ILEILEVALVALchain 'E9'E9SA3 - 2043 - 204
107ILEILEVALVALchain 'F9'F9BB3 - 2043 - 204
117ILEILEVALVALchain 'G9'G9KB3 - 2043 - 204
127ILEILEVALVALchain 'H9'H9TB3 - 2043 - 204
137ILEILEVALVALchain 'I9'I9CC3 - 2043 - 204
147ILEILEVALVALchain 'J9'J9LC3 - 2043 - 204
157ILEILEVALVALchain 'K9'K9UC3 - 2043 - 204
167ILEILEVALVALchain 'L9'L9DD3 - 2043 - 204
177ILEILEVALVALchain 'M9'M9MD3 - 2043 - 204
187ILEILEVALVALchain 'N9'N9VD3 - 2043 - 204
197ILEILEVALVALchain 'O9'O9EE3 - 2043 - 204
207ILEILEVALVALchain 'P9'P9NE3 - 2043 - 204
217ILEILEVALVALchain 'Q9'Q9WE3 - 2043 - 204
227ILEILEVALVALchain 'R9'R9FF3 - 2043 - 204
237ILEILEVALVALchain 'S9'S9OF3 - 2043 - 204
247ILEILEVALVALchain 'T9'T9XF3 - 2043 - 204
257ILEILEVALVALchain 'U9'U9GG3 - 2043 - 204
267ILEILEVALVALchain 'V9'V9PG3 - 2043 - 204
277ILEILEVALVALchain 'W9'W9YG3 - 2043 - 204
287ILEILEVALVALchain 'X9'X9HH3 - 2043 - 204
297ILEILEVALVALchain 'Y9'Y9QH3 - 2043 - 204
307ILEILEVALVALchain 'Z9'Z9ZH3 - 2043 - 204
18ALAALATHRTHR(chain 'A2' and resid 2 through 92)A2B2 - 922 - 92
28ALAALATHRTHR(chain '12' and resid 2 through 92)12BI2 - 922 - 92
38ALAALATHRTHR(chain '22' and resid 2 through 92)22KI2 - 922 - 92
48ALAALATHRTHR(chain '32' and resid 2 through 92)32TI2 - 922 - 92
58ALAALATHRTHR(chain '42' and resid 2 through 92)42CJ2 - 922 - 92
68ALAALATHRTHRchain 'B2'B2K2 - 922 - 92
78ALAALATHRTHR(chain 'C2' and resid 2 through 92)C2T2 - 922 - 92
88ALAALATHRTHR(chain 'D2' and resid 2 through 92)D2CA2 - 922 - 92
98ALAALATHRTHR(chain 'E2' and resid 2 through 92)E2LA2 - 922 - 92
108ALAALATHRTHR(chain 'F2' and resid 2 through 92)F2UA2 - 922 - 92
118ALAALATHRTHR(chain 'G2' and resid 2 through 92)G2DB2 - 922 - 92
128ALAALATHRTHR(chain 'H2' and resid 2 through 92)H2MB2 - 922 - 92
138ALAALATHRTHR(chain 'I2' and resid 2 through 92)I2VB2 - 922 - 92
148ALAALATHRTHR(chain 'J2' and resid 2 through 92)J2EC2 - 922 - 92
158ALAALATHRTHR(chain 'K2' and resid 2 through 92)K2NC2 - 922 - 92
168ALAALATHRTHR(chain 'L2' and resid 2 through 92)L2WC2 - 922 - 92
178ALAALATHRTHR(chain 'M2' and resid 2 through 92)M2FD2 - 922 - 92
188ALAALATHRTHR(chain 'N2' and resid 2 through 92)N2OD2 - 922 - 92
198ALAALATHRTHR(chain 'O2' and resid 2 through 92)O2XD2 - 922 - 92
208ALAALATHRTHR(chain 'P2' and resid 2 through 92)P2GE2 - 922 - 92
218ALAALATHRTHR(chain 'Q2' and resid 2 through 92)Q2PE2 - 922 - 92
228ALAALATHRTHR(chain 'R2' and resid 2 through 92)R2YE2 - 922 - 92
238ALAALATHRTHR(chain 'S2' and resid 2 through 92)S2HF2 - 922 - 92
248ALAALATHRTHR(chain 'T2' and resid 2 through 92)T2QF2 - 922 - 92
258ALAALATHRTHR(chain 'U2' and resid 2 through 92)U2ZF2 - 922 - 92
268ALAALATHRTHR(chain 'V2' and resid 2 through 92)V2IG2 - 922 - 92
278ALAALATHRTHR(chain 'W2' and resid 2 through 92)W2RG2 - 922 - 92
288ALAALATHRTHR(chain 'X2' and resid 2 through 92)X2AH2 - 922 - 92
298ALAALATHRTHR(chain 'Y2' and resid 2 through 92)Y2JH2 - 922 - 92
308ALAALATHRTHR(chain 'Z2' and resid 2 through 92)Z2SH2 - 922 - 92
19ASPASPPROPRO(chain 'A3' and resid 3 through 93)A3C3 - 933 - 93
29ASPASPPROPRO(chain '13' and resid 3 through 93)13CI3 - 933 - 93
39ASPASPPROPRO(chain '23' and resid 3 through 93)23LI3 - 933 - 93
49ASPASPPROPRO(chain '33' and resid 3 through 93)33UI3 - 933 - 93
59ASPASPPROPRO(chain '43' and resid 3 through 93)43DJ3 - 933 - 93
69ASPASPPROPRO(chain 'B3' and resid 3 through 93)B3L3 - 933 - 93
79ASPASPPROPRO(chain 'C3' and resid 3 through 93)C3U3 - 933 - 93
89ASPASPPROPRO(chain 'D3' and resid 4 through 94)D3DA4 - 943 - 93
99ASPASPPROPRO(chain 'E3' and resid 3 through 93)E3MA3 - 933 - 93
109ASPASPPROPRO(chain 'F3' and resid 3 through 93)F3VA3 - 933 - 93
119ASPASPPROPRO(chain 'G3' and resid 3 through 93)G3EB3 - 933 - 93
129ASPASPPROPRO(chain 'H3' and resid 3 through 93)H3NB3 - 933 - 93
139ASPASPPROPROchain 'I3'I3WB3 - 933 - 93
149ASPASPPROPRO(chain 'J3' and resid 3 through 93)J3FC3 - 933 - 93
159ASPASPPROPRO(chain 'K3' and resid 3 through 93)K3OC3 - 933 - 93
169ASPASPPROPRO(chain 'L3' and resid 3 through 93)L3XC3 - 933 - 93
179ASPASPPROPRO(chain 'M3' and resid 3 through 93)M3GD3 - 933 - 93
189ASPASPPROPROchain 'N3'N3PD3 - 933 - 93
199ASPASPPROPRO(chain 'O3' and resid 3 through 93)O3YD3 - 933 - 93
209ASPASPPROPRO(chain 'P3' and resid 3 through 93)P3HE3 - 933 - 93
219ASPASPPROPRO(chain 'Q3' and resid 3 through 93)Q3QE3 - 933 - 93
229ASPASPPROPRO(chain 'R3' and resid 3 through 93)R3ZE3 - 933 - 93
239ASPASPPROPRO(chain 'S3' and resid 3 through 93)S3IF3 - 933 - 93
249ASPASPPROPRO(chain 'T3' and resid 3 through 93)T3RF3 - 933 - 93
259ASPASPPROPRO(chain 'U3' and resid 3 through 93)U3AG3 - 933 - 93
269ASPASPPROPRO(chain 'V3' and resid 3 through 93)V3JG3 - 933 - 93
279ASPASPPROPRO(chain 'W3' and resid 3 through 93)W3SG3 - 933 - 93
289ASPASPPROPRO(chain 'X3' and resid 3 through 93)X3BH3 - 933 - 93
299ASPASPPROPRO(chain 'Y3' and resid 3 through 93)Y3KH3 - 933 - 93
309ASPASPPROPRO(chain 'Z3' and resid 3 through 93)Z3TH3 - 933 - 93

NCS ensembles :
ID
1
2
3
4
5
6
7
8
9

-
Components

#1: Protein ...
Ethanolamine utilization protein EutN/carboxysome structural protein Ccml


Mass: 9866.319 Da / Num. of mol.: 30
Source method: isolated from a genetically manipulated source
Source: (gene. exp.) Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) (bacteria)
Strain: DSM 14365 / JCM 11303 / SMP-2 / Gene: Hoch_5814 / Production host: Escherichia coli (E. coli) / References: UniProt: D0LHE5
#2: Protein ...
Microcompartments protein


Mass: 10126.718 Da / Num. of mol.: 180
Source method: isolated from a genetically manipulated source
Source: (gene. exp.) Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) (bacteria)
Strain: DSM 14365 / JCM 11303 / SMP-2 / Gene: Hoch_5815 / Production host: Escherichia coli (E. coli) / References: UniProt: D0LID5
#3: Protein ...
Microcompartments protein


Mass: 22904.137 Da / Num. of mol.: 60
Source method: isolated from a genetically manipulated source
Source: (gene. exp.) Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) (bacteria)
Strain: DSM 14365 / JCM 11303 / SMP-2 / Gene: Hoch_5816 / Production host: Escherichia coli (E. coli) / References: UniProt: D0LID6

-
Experimental details

-
Experiment

ExperimentMethod: X-RAY DIFFRACTION / Number of used crystals: 1

-
Sample preparation

CrystalDensity Matthews: 6.12 Å3/Da / Density % sol: 79.91 %
Crystal growTemperature: 295 K / Method: vapor diffusion, sitting drop / Details: 6% PEG-20000 0.1M Bicine pH 8.9

-
Data collection

DiffractionMean temperature: 100 K
Diffraction sourceSource: SYNCHROTRON / Site: SSRL / Beamline: BL12-2 / Wavelength: 1.03317 Å
DetectorType: DECTRIS PILATUS 6M / Detector: PIXEL / Date: Dec 15, 2015
RadiationProtocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M / Scattering type: x-ray
Radiation wavelengthWavelength: 1.03317 Å / Relative weight: 1
ReflectionResolution: 3.51→3.69 Å / Num. obs: 880323 / % possible obs: 98.2 % / Redundancy: 15.8 % / Biso Wilson estimate: 85.2215508701 Å2 / Rmerge(I) obs: 0.0132 / Net I/σ(I): 3.6
Reflection shellResolution: 3.51→3.69 Å / Redundancy: 13.9 % / Rmerge(I) obs: 0.116 / Mean I/σ(I) obs: 0.4 / Num. unique obs: 135274 / CC1/2: 0.26 / % possible all: 92.7

-
Processing

Software
NameVersionClassification
PHENIXdev_2650refinement
XDSdata reduction
SCALAdata scaling
PHASERphasing
RefinementMethod to determine structure: MOLECULAR REPLACEMENT
Starting model: EM map

Resolution: 3.51015467477→39.8501711014 Å / SU ML: 0.560701484836 / Cross valid method: FREE R-VALUE / σ(F): 1.32803567478 / Phase error: 38.4543270985
Stereochemistry target values: GeoStd + Monomer Library + CDL v1.2
RfactorNum. reflection% reflection
Rfree0.323487705436 20018 2.27763270925 %
Rwork0.279040970204 858877 -
obs0.280056559999 878895 88.6131146946 %
Solvent computationShrinkage radii: 0.9 Å / VDW probe radii: 1.11 Å / Solvent model: FLAT BULK SOLVENT MODEL
Displacement parametersBiso mean: 101.665542029 Å2
Refinement stepCycle: LAST / Resolution: 3.51015467477→39.8501711014 Å
ProteinNucleic acidLigandSolventTotal
Num. atoms215283 0 0 0 215283
Refine LS restraints
Refine-IDTypeDev idealNumber
X-RAY DIFFRACTIONf_bond_d0.00450844975263217621
X-RAY DIFFRACTIONf_angle_d0.864041674529296423
X-RAY DIFFRACTIONf_chiral_restr0.053559537035136318
X-RAY DIFFRACTIONf_plane_restr0.0061270332859839516
X-RAY DIFFRACTIONf_dihedral_angle_d6.22577909852130463
LS refinement shell
Resolution (Å)Rfactor RfreeNum. reflection RfreeRfactor RworkNum. reflection RworkRefine-ID% reflection obs (%)
3.5102-3.550.4012338046472700.3793976141579356X-RAY DIFFRACTION29.332358229
3.55-3.59180.4310122613184230.40150002827219682X-RAY DIFFRACTION61.0463350944
3.5918-3.63550.4048839896282360.38700710049610700X-RAY DIFFRACTION33.2229547043
3.6355-3.68150.4806631311855380.40207366251823435X-RAY DIFFRACTION72.8131454258
3.6815-3.72990.422308235792790.38225309443613793X-RAY DIFFRACTION42.7967519236
3.7299-3.7810.4050486953826440.38057380040226505X-RAY DIFFRACTION82.3570453511
3.781-3.8350.428723956426760.36792792727129076X-RAY DIFFRACTION90.3656906816
3.835-3.89220.4176980015737050.36779268092930284X-RAY DIFFRACTION94.0828222721
3.8922-3.95290.3899568781966980.35434236445628655X-RAY DIFFRACTION89.0591340757
3.9529-4.01770.3964325717446270.34722579939727752X-RAY DIFFRACTION86.1719248171
4.0177-4.08690.3988393549927570.34600637496431035X-RAY DIFFRACTION96.4475320814
4.0869-4.16110.3725759182947450.32649807306931974X-RAY DIFFRACTION99.3109937473
4.1611-4.24110.3832255399337000.30541263424632001X-RAY DIFFRACTION99.1961414791
4.2411-4.32750.3592601419927820.28856057853631889X-RAY DIFFRACTION99.1592812917
4.3275-4.42150.3241043653267650.28014472658432128X-RAY DIFFRACTION99.5701528682
4.4215-4.52420.3227910872626980.27569017326231947X-RAY DIFFRACTION98.9992418499
4.5242-4.63720.3098972364177550.25258082911832076X-RAY DIFFRACTION99.4908936634
4.6372-4.76240.3132240989787430.24189910100132217X-RAY DIFFRACTION99.7126002118
4.7624-4.90230.3043490838427510.25035640270832144X-RAY DIFFRACTION99.7543668122
4.9023-5.06020.3005144079577510.2476752312732299X-RAY DIFFRACTION99.8549761315
5.0602-5.24070.3189642198087340.25655025693831689X-RAY DIFFRACTION98.2872559719
5.2407-5.450.3143740199556830.25209073900231405X-RAY DIFFRACTION96.927956502
5.45-5.69740.3198257000017530.26115323018132318X-RAY DIFFRACTION99.9003141614
5.6974-5.99680.3247227749958660.27246467637332223X-RAY DIFFRACTION99.8822748128
5.9968-6.37110.311466536446190.27761535792332468X-RAY DIFFRACTION99.8370598352
6.3711-6.86080.3295478403956090.25749703898832437X-RAY DIFFRACTION99.5991440369
6.8608-7.5470.28951912971410860.25656589832332005X-RAY DIFFRACTION99.5817032802
7.547-8.62940.2212204299748360.21221381937431295X-RAY DIFFRACTION96.4431504382
8.6294-10.83580.214495031932420.18749969771532832X-RAY DIFFRACTION98.8641119149
10.8358-39.85270.24108514423910470.26906738380231257X-RAY DIFFRACTION94.9726583172

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