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Open data
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Basic information
Entry | Database: PDB / ID: 5o1t | ||||||
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Title | Solution structure of the RNA binding domain of Nrd1 | ||||||
![]() | Protein NRD1 | ||||||
![]() | RNA BINDING PROTEIN / Nrd1 / RRM / RNA-binding / transcription non-coding RNAs | ||||||
Function / homology | ![]() transcription regulatory region RNA binding / antisense RNA transcript catabolic process / Nrd1 complex / sno(s)RNA 3'-end processing / termination of RNA polymerase II transcription, exosome-dependent / tRNA 3'-end processing / snRNA 3'-end processing / CUT catabolic process / nuclear mRNA surveillance / mRNA 3'-end processing ...transcription regulatory region RNA binding / antisense RNA transcript catabolic process / Nrd1 complex / sno(s)RNA 3'-end processing / termination of RNA polymerase II transcription, exosome-dependent / tRNA 3'-end processing / snRNA 3'-end processing / CUT catabolic process / nuclear mRNA surveillance / mRNA 3'-end processing / protein domain specific binding / mRNA binding / RNA binding / nucleus Similarity search - Function | ||||||
Biological species | ![]() ![]() | ||||||
Method | SOLUTION NMR / Minimization | ||||||
![]() | Martinez-Lumbreras, S. / Perez-Canadillas, J.M. | ||||||
Funding support | ![]()
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![]() | ![]() Title: The structure of transcription termination factor Nrd1 reveals an original mode for GUAA recognition. Authors: Franco-Echevarria, E. / Gonzalez-Polo, N. / Zorrilla, S. / Martinez-Lumbreras, S. / Santiveri, C.M. / Campos-Olivas, R. / Sanchez, M. / Calvo, O. / Gonzalez, B. / Perez-Canadillas, J.M. | ||||||
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 1.1 MB | Display | ![]() |
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PDB format | ![]() | 920.6 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
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-Validation report
Summary document | ![]() | 485.8 KB | Display | ![]() |
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Full document | ![]() | 1.2 MB | Display | |
Data in XML | ![]() | 137.7 KB | Display | |
Data in CIF | ![]() | 150.4 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
Related structure data | ![]() 5o1wC ![]() 5o1xC ![]() 5o1yC ![]() 5o1zC ![]() 5o20C C: citing same article ( |
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Links
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Assembly
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NMR ensembles |
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Components
#1: Protein | Mass: 20051.533 Da / Num. of mol.: 1 Source method: isolated from a genetically manipulated source Source: (gene. exp.) ![]() ![]() Gene: NRD1, YNL251C, N0868 / Production host: ![]() ![]() |
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-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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NMR experiment |
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Sample preparation
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