Entry | Database: PDB / ID: 5n4c |
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Title | Prolyl oligopeptidase B from Galerina marginata bound to 35mer hydrolysis and macrocyclization substrate - S577A mutant |
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Components | - Alpha-amanitin proprotein
- Prolyl oligopeptidase
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Keywords | HYDROLASE / amanitin biosynthesis / prolyl oligopeptidase / macrocyclase / peptidase / beta-propeller / closed form |
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Function / homology | Function and homology information
prolyl oligopeptidase / oligopeptidase activity / toxin activity / serine-type endopeptidase activity / proteolysis / cytosolSimilarity search - Function Amanitin/phalloidin toxin / Peptidase S9A, prolyl oligopeptidase / Peptidase S9A, N-terminal domain / Prolyl oligopeptidase, N-terminal beta-propeller domain / Prolyl endopeptidase family serine active site. / Peptidase S9, serine active site / Peptidase S9, prolyl oligopeptidase, catalytic domain / Prolyl oligopeptidase family / Alpha/Beta hydrolase fold, catalytic domain / Alpha/Beta hydrolase fold ...Amanitin/phalloidin toxin / Peptidase S9A, prolyl oligopeptidase / Peptidase S9A, N-terminal domain / Prolyl oligopeptidase, N-terminal beta-propeller domain / Prolyl endopeptidase family serine active site. / Peptidase S9, serine active site / Peptidase S9, prolyl oligopeptidase, catalytic domain / Prolyl oligopeptidase family / Alpha/Beta hydrolase fold, catalytic domain / Alpha/Beta hydrolase fold / Rossmann fold / 3-Layer(aba) Sandwich / Alpha BetaSimilarity search - Domain/homology |
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Biological species | Galerina marginata (fungus) |
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Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 2.19 Å |
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Authors | Czekster, C.M. / McMahon, S.A. / Ludewig, H. / Naismith, J.H. |
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Funding support | United Kingdom, 1items Organization | Grant number | Country |
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European Research Council | 339367 NCB-TNT | United Kingdom |
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Citation | Journal: Nat Commun / Year: 2017 Title: Characterization of a dual function macrocyclase enables design and use of efficient macrocyclization substrates. Authors: Czekster, C.M. / Ludewig, H. / McMahon, S.A. / Naismith, J.H. |
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History | Deposition | Feb 10, 2017 | Deposition site: PDBE / Processing site: PDBE |
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Revision 1.0 | Nov 1, 2017 | Provider: repository / Type: Initial release |
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Revision 1.1 | Nov 8, 2017 | Group: Database references / Derived calculations Category: citation / pdbx_struct_assembly ...citation / pdbx_struct_assembly / pdbx_struct_assembly_gen / pdbx_struct_assembly_prop Item: _citation.journal_volume / _citation.page_first ..._citation.journal_volume / _citation.page_first / _citation.page_last / _citation.pdbx_database_id_PubMed / _citation.title |
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Revision 1.2 | Oct 16, 2019 | Group: Data collection / Category: reflns_shell |
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Revision 1.3 | May 8, 2024 | Group: Data collection / Database references / Refinement description Category: chem_comp_atom / chem_comp_bond ...chem_comp_atom / chem_comp_bond / database_2 / struct_ncs_dom_lim Item: _database_2.pdbx_DOI / _database_2.pdbx_database_accession ..._database_2.pdbx_DOI / _database_2.pdbx_database_accession / _struct_ncs_dom_lim.beg_auth_comp_id / _struct_ncs_dom_lim.beg_label_asym_id / _struct_ncs_dom_lim.beg_label_comp_id / _struct_ncs_dom_lim.beg_label_seq_id / _struct_ncs_dom_lim.end_auth_comp_id / _struct_ncs_dom_lim.end_label_asym_id / _struct_ncs_dom_lim.end_label_comp_id / _struct_ncs_dom_lim.end_label_seq_id |
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