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- PDB-5mh3: Crystal structure of a DM9 domain containing protein from Crassos... -

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Basic information

Entry
Database: PDB / ID: 5mh3
TitleCrystal structure of a DM9 domain containing protein from Crassostrea gigas with K43A mutation
ComponentsNatterin-3
KeywordsSUGAR BINDING PROTEIN / beta fold
Function / homologyDM9 repeat / DM9 repeat / Repeats found in Drosophila proteins. / Natterin-3
Function and homology information
Biological speciesCrassostrea gigas (Pacific oyster)
MethodX-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 1.6 Å
AuthorsWeinert, T. / Warkentin, E. / Pang, G.
Citation
Journal: Front Immunol / Year: 2017
Title: DM9 Domain Containing Protein Functions As a Pattern Recognition Receptor with Broad Microbial Recognition Spectrum.
Authors: Jiang, S. / Wang, L. / Huang, M. / Jia, Z. / Weinert, T. / Warkentin, E. / Liu, C. / Song, X. / Zhang, H. / Witt, J. / Qiu, L. / Peng, G. / Song, L.
#1: Journal: To Be Published
Title: A DM9 domain containing protein functions as a pattern recognition receptor with novel structural basis in Crassostrea gigas
Authors: Jiang, S. / Huang, M.
History
DepositionNov 22, 2016Deposition site: PDBE / Processing site: PDBE
Revision 1.0Dec 27, 2017Provider: repository / Type: Initial release

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

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Assembly

Deposited unit
A: Natterin-3
B: Natterin-3
C: Natterin-3
D: Natterin-3
E: Natterin-3
F: Natterin-3
G: Natterin-3
H: Natterin-3
I: Natterin-3
J: Natterin-3
K: Natterin-3
L: Natterin-3
hetero molecules


Theoretical massNumber of molelcules
Total (without water)186,84824
Polymers185,74312
Non-polymers1,10512
Water36,5882031
1
A: Natterin-3
B: Natterin-3
hetero molecules


Theoretical massNumber of molelcules
Total (without water)31,1414
Polymers30,9572
Non-polymers1842
Water362
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area2790 Å2
ΔGint-10 kcal/mol
Surface area11720 Å2
MethodPISA
2
C: Natterin-3
E: Natterin-3
hetero molecules


Theoretical massNumber of molelcules
Total (without water)31,1414
Polymers30,9572
Non-polymers1842
Water362
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area2730 Å2
ΔGint-11 kcal/mol
Surface area11860 Å2
MethodPISA
3
H: Natterin-3
hetero molecules

D: Natterin-3
hetero molecules


Theoretical massNumber of molelcules
Total (without water)31,1414
Polymers30,9572
Non-polymers1842
Water362
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
crystal symmetry operation1_565x,y+1,z1
MethodPISA
4
D: Natterin-3
hetero molecules

H: Natterin-3
hetero molecules


Theoretical massNumber of molelcules
Total (without water)31,1414
Polymers30,9572
Non-polymers1842
Water362
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
crystal symmetry operation1_545x,y-1,z1
Buried area2760 Å2
ΔGint-11 kcal/mol
Surface area11930 Å2
MethodPISA
5
F: Natterin-3
J: Natterin-3
hetero molecules


Theoretical massNumber of molelcules
Total (without water)31,1414
Polymers30,9572
Non-polymers1842
Water362
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area2740 Å2
ΔGint-11 kcal/mol
Surface area11800 Å2
MethodPISA
6
G: Natterin-3
I: Natterin-3
hetero molecules


Theoretical massNumber of molelcules
Total (without water)31,1414
Polymers30,9572
Non-polymers1842
Water362
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area2770 Å2
ΔGint-11 kcal/mol
Surface area11790 Å2
MethodPISA
7
L: Natterin-3
hetero molecules

K: Natterin-3
hetero molecules


Theoretical massNumber of molelcules
Total (without water)31,1414
Polymers30,9572
Non-polymers1842
Water362
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
crystal symmetry operation1_565x,y+1,z1
MethodPISA
8
K: Natterin-3
hetero molecules

L: Natterin-3
hetero molecules


Theoretical massNumber of molelcules
Total (without water)31,1414
Polymers30,9572
Non-polymers1842
Water362
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
crystal symmetry operation1_545x,y-1,z1
Buried area2800 Å2
ΔGint-10 kcal/mol
Surface area11700 Å2
MethodPISA
Unit cell
Length a, b, c (Å)61.930, 97.960, 101.420
Angle α, β, γ (deg.)101.34, 107.87, 106.46
Int Tables number1
Space group name H-MP1

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Components

#1: Protein
Natterin-3


Mass: 15478.596 Da / Num. of mol.: 12
Source method: isolated from a genetically manipulated source
Source: (gene. exp.) Crassostrea gigas (Pacific oyster) / Gene: CGI_10011001, CGI_10018577 / Production host: Escherichia coli (E. coli) / References: UniProt: K1QRB6
#2: Chemical
ChemComp-GOL / GLYCEROL / GLYCERIN / PROPANE-1,2,3-TRIOL / Glycerol


Mass: 92.094 Da / Num. of mol.: 12 / Source method: obtained synthetically / Formula: C3H8O3
#3: Water ChemComp-HOH / water / Water


Mass: 18.015 Da / Num. of mol.: 2031 / Source method: isolated from a natural source / Formula: H2O

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Experimental details

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Experiment

ExperimentMethod: X-RAY DIFFRACTION / Number of used crystals: 1

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Sample preparation

CrystalDensity Matthews: 2.88 Å3/Da / Density % sol: 57.22 %
Crystal growTemperature: 291.15 K / Method: vapor diffusion, sitting drop
Details: 0.1M Bis-Tris pH 6.0 25%PEG 3350 0.2M Lithium sulphate monohydrate

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Data collection

DiffractionMean temperature: 100 K
Diffraction sourceSource: SYNCHROTRON / Site: SRS / Beamline: PX10.1 / Wavelength: 1 Å
DetectorType: DECTRIS PILATUS 6M / Detector: PIXEL / Date: Jun 6, 2016
RadiationProtocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M / Scattering type: x-ray
Radiation wavelengthWavelength: 1 Å / Relative weight: 1
ReflectionResolution: 1.6→20 Å / Num. all: 273332 / Num. obs: 261115 / % possible obs: 95.5 % / Redundancy: 3.5 % / Rmerge(I) obs: 0.052 / Net I/σ(I): 16.3
Reflection shellResolution: 1.6→1.65 Å / Redundancy: 3.5 % / Rmerge(I) obs: 1.07 / Num. measured obs: 21413 / Num. unique all: 24071 / % possible all: 89

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Processing

Software
NameVersionClassification
PHENIX(1.10.1_2155: ???)refinement
XDSdata reduction
XDSdata scaling
PHASERphasing
RefinementMethod to determine structure: MOLECULAR REPLACEMENT
Starting model: DM9CP

Resolution: 1.6→19.987 Å / SU ML: 0.2 / Cross valid method: THROUGHOUT / σ(F): 1.94 / Phase error: 22.57
RfactorNum. reflection% reflection
Rfree0.1964 13054 5 %
Rwork0.1689 --
obs0.1702 261071 95.68 %
Solvent computationShrinkage radii: 0.9 Å / VDW probe radii: 1.11 Å
Refinement stepCycle: LAST / Resolution: 1.6→19.987 Å
ProteinNucleic acidLigandSolventTotal
Num. atoms13092 0 72 2031 15195
Refine LS restraints
Refine-IDTypeDev idealNumber
X-RAY DIFFRACTIONf_bond_d0.00613508
X-RAY DIFFRACTIONf_angle_d0.79318324
X-RAY DIFFRACTIONf_dihedral_angle_d10.3867822
X-RAY DIFFRACTIONf_chiral_restr0.0621999
X-RAY DIFFRACTIONf_plane_restr0.0052359
LS refinement shell
Resolution (Å)Rfactor RfreeNum. reflection RfreeRfactor RworkNum. reflection RworkRefine-ID% reflection obs (%)
1.6-1.61820.38483730.34167088X-RAY DIFFRACTION82
1.6182-1.63720.33954260.31738106X-RAY DIFFRACTION93
1.6372-1.65720.32864260.29748076X-RAY DIFFRACTION94
1.6572-1.67810.30734280.28468147X-RAY DIFFRACTION95
1.6781-1.70020.32234320.26738201X-RAY DIFFRACTION95
1.7002-1.72350.2854390.26128339X-RAY DIFFRACTION95
1.7235-1.74810.28364300.24728167X-RAY DIFFRACTION95
1.7481-1.77420.27094360.23898281X-RAY DIFFRACTION96
1.7742-1.80190.2644320.23668220X-RAY DIFFRACTION96
1.8019-1.83140.28524350.22628252X-RAY DIFFRACTION96
1.8314-1.86290.23464360.20968288X-RAY DIFFRACTION96
1.8629-1.89680.22174370.19798311X-RAY DIFFRACTION96
1.8968-1.93320.22334350.18958274X-RAY DIFFRACTION96
1.9332-1.97270.2184360.18428290X-RAY DIFFRACTION96
1.9727-2.01550.21194400.17728356X-RAY DIFFRACTION96
2.0155-2.06240.2024440.17688440X-RAY DIFFRACTION97
2.0624-2.11390.22584330.17798222X-RAY DIFFRACTION96
2.1139-2.1710.19964420.17368399X-RAY DIFFRACTION97
2.171-2.23480.21554390.16438329X-RAY DIFFRACTION97
2.2348-2.30680.19184390.15628354X-RAY DIFFRACTION96
2.3068-2.38910.19544430.15698415X-RAY DIFFRACTION97
2.3891-2.48460.24420.16888397X-RAY DIFFRACTION97
2.4846-2.59750.20064410.16338384X-RAY DIFFRACTION97
2.5975-2.73410.19724430.16338404X-RAY DIFFRACTION97
2.7341-2.90490.18454380.15478330X-RAY DIFFRACTION97
2.9049-3.12840.18244450.15298442X-RAY DIFFRACTION97
3.1284-3.44180.16524440.14268446X-RAY DIFFRACTION98
3.4418-3.93650.14384370.13748310X-RAY DIFFRACTION96
3.9365-4.94720.14494380.12288313X-RAY DIFFRACTION96
4.9472-19.98870.18624450.16898436X-RAY DIFFRACTION98
Refinement TLS params.

Method: refined / Refine-ID: X-RAY DIFFRACTION

IDL112)L122)L132)L222)L232)L332)S11 (Å °)S12 (Å °)S13 (Å °)S21 (Å °)S22 (Å °)S23 (Å °)S31 (Å °)S32 (Å °)S33 (Å °)T112)T122)T132)T222)T232)T332)Origin x (Å)Origin y (Å)Origin z (Å)
13.80971.4047-1.73693.2887-0.76342.0062-0.09840.47190.2142-0.32120.18390.26570.0843-0.3973-0.10340.21690.0024-0.06050.28490.02470.1984-4.4466.25898.4974
26.6911.7485-1.0262.6956-2.60092.71820.0951-0.3869-0.46360.1476-0.16910.12480.1899-0.08930.00280.2380.0315-0.00650.21850.03590.23133.5118-1.317221.5675
32.35690.044-0.78021.9323-0.06762.7195-0.00410.05990.19590.0220.0280.2654-0.1159-0.376-0.01790.13910.0291-0.03460.1869-0.00210.1847-8.23528.366820.114
46.01280.6618-1.3683.0893-0.16184.5306-0.00940.15370.10330.04960.11850.27060.2188-0.7569-0.13930.19010.0146-0.0350.21860.00690.234-10.61377.071518.0496
52.9577-0.1731-1.1742.70121.24445.31460.05420.11340.32150.0067-0.04440.0225-0.0450.2992-0.04350.14240.037-0.00060.1620.01250.18467.523113.925711.5853
62.858-0.2994-1.03563.3079-0.63413.42920.171-0.24760.33610.20650.01560.0842-0.19530.1448-0.17330.16080.01360.01440.1803-0.05440.20171.058915.81623.3829
74.17821.7355-0.68797.3906-0.75153.77270.2811-0.49160.29420.4075-0.07730.2611-0.17150.0346-0.20670.20710.03490.0220.2674-0.0450.1972-3.450913.875331.5635
86.14471.1011-4.53032.6173-1.50513.47880.0574-0.21080.3117-0.092-0.0345-0.19060.00270.098-0.04530.2261-0.0070.01950.1656-0.0520.27017.559317.402518.5726
92.32060.0237-1.76151.6617-0.46893.9493-0.28920.0859-0.29240.0115-0.02390.03690.6135-0.15810.29190.2896-0.00960.00730.1607-0.0210.207211.0024-1.96152.6699
102.907-0.7506-0.63153.58920.79262.718-0.07560.0606-0.0639-0.070.0455-0.1610.14690.2350.02650.15670.0359-0.00180.15270.00010.129919.1485.97592.9111
113.16061.3-0.50531.3491-0.20952.5304-0.0544-0.0328-0.3184-0.18530.0568-0.13940.18730.10840.00980.19470.03270.00120.1548-0.00260.156322.52096.3059-2.4245
123.60370.6079-1.88273.04750.19995.0536-0.35140.0705-0.1921-0.34550.0938-0.21790.43990.19750.27920.22710.0765-0.00070.15670.00350.156621.20851.0872-1.918
134.01951.35740.11431.69360.00352.52280.0008-0.3005-0.0460.0815-0.10460.02430.10590.02150.08570.19650.03480.00330.1544-0.00380.194711.90742.078116.1549
142.0199-0.0686-0.45113.0829-1.24142.64760.0125-0.2949-0.10120.1165-0.1018-0.22780.16710.42310.05890.1470.0409-0.03060.21250.00810.170224.53355.572112.5175
152.9513-0.68782.45724.4711-1.11334.18410.1285-0.2184-0.1750.0178-0.1072-0.35460.11881.01690.10840.12640.0407-0.0140.36470.0150.233631.52799.99597.8029
167.55362.9455-5.53873.0571-3.78646.46340.0011-0.4066-0.13190.3919-0.0883-0.1267-0.08740.1680.08150.2030.0532-0.04130.2176-0.0060.163618.83974.787718.416
177.7056-3.15572.76234.393-1.39233.2163-0.0833-0.5197-0.10430.56350.08270.2297-0.1707-0.1840.00130.19770.00310.09810.2614-0.0040.241627.989236.64420.4279
185.2418-2.83782.51281.932-1.7281.6353-0.2465-0.66150.0320.2130.19740.3236-0.1652-0.26890.06230.17890.05120.03090.2856-0.01840.239129.355645.351916.7607
193.36770.63450.5037.1478-2.54442.14730.02910.23150.101-0.1847-0.0210.3588-0.4055-0.0614-0.02120.17310.0340.02130.2080.01090.223135.551147.43823.8849
202.52071.4695-0.39934.0428-0.49272.30370.1213-0.0794-0.2431-0.0129-0.14020.31690.1606-0.22470.01510.11080.01040.01970.2087-0.01320.267824.868435.04569.3335
211.04170.45780.61172.46461.05621.3654-0.13090.12950.21-0.4034-0.07820.9617-0.2379-0.23610.24580.16510.0389-0.02810.229-0.02480.330623.331641.26814.5683
222.4963-0.43820.10692.6575-0.30982.91330.18750.29380.1039-0.0733-0.20660.5643-0.0535-0.33760.01510.1150.04670.01040.2986-0.01980.322421.92739.05329.3527
231.33311.0831.61632.7282.17524.04870.045-0.1028-0.14440.0730.055-0.15130.12410.2476-0.12110.11890.02130.01640.22660.0130.1840.480533.643115.9564
241.00420.76390.253.0148-0.57891.93570.05430.1143-0.088-0.154-0.001-0.03630.14510.01-0.06020.13230.02020.01450.1919-0.03180.204732.63629.62733.1188
256.7005-1.8338-0.94548.95531.65164.58660.00570.22410.0682-0.6338-0.05960.4717-0.2322-0.20330.01750.2486-0.0041-0.03430.2204-0.00490.226228.166133.5996-5.4156
264.52760.31745.52323.2916-0.46917.70340.04190.1656-0.14720.0799-0.0461-0.24570.02480.33040.01260.10970.02330.02640.1569-0.01250.219440.434329.30959.4989
272.89751.3023-0.20793.77580.02752.7249-0.0937-0.3053-0.09650.31050.1841-0.62980.15920.273-0.06650.14280.0556-0.06680.2267-0.01870.273851.9419-20.808921.4043
287.827-1.0678-0.09282.0627-2.82018.23780.14690.22860.8693-0.3352-0.13780.0237-0.63580.0960.00490.24640.01060.00060.18870.00640.231542.2216-10.063612.3197
292.9296-0.422-0.32033.41190.44883.5938-0.0211-0.49820.23780.54580.1616-0.2976-0.08640.14-0.14950.20080.0366-0.03470.2071-0.03110.177345.2044-12.310527.232
303.6927-0.1025-0.26095.71181.56684.4938-0.0444-0.42820.48330.51170.0948-0.4022-0.2460.2967-0.09450.2540.0149-0.06360.2298-0.05610.262148.5914-12.119827.8142
314.3863-1.291-2.87954.42672.16824.33540.02590.1747-0.02190.1053-0.06080.10580.2263-0.1530.03180.14650.0006-0.03080.16350.02150.13439.426-27.702318.0279
322.5852-0.1738-0.8183.55930.01073.8674-0.03-0.22080.14790.39830.04480.2984-0.1928-0.296-0.00860.18090.06180.02590.22770.0050.159833.5052-14.691727.0931
333.2624-1.8404-1.96813.53874.67786.55840.0117-0.0687-0.1656-0.01270.01950.5730.1792-0.46770.0190.1238-0.00910.01750.23380.0520.159733.0142-24.756621.3289
342.1950.6710.57772.3015-0.4724.7549-0.1494-0.19880.27120.17390.06030.1288-0.4313-0.19430.09840.23620.05550.00740.2015-0.05020.235343.644250.285923.476
355.5013-2.1904-0.23537.2981-1.5465.6536-0.0352-0.3917-0.46150.57680.0205-0.08460.13750.1542-0.01010.209-0.0284-0.02240.23260.01480.231146.88333.410224.5628
361.99140.38630.45072.1778-0.10623.1894-0.0489-0.19550.18190.17150.0025-0.2108-0.22330.26980.06560.1781-0.0212-0.00250.1896-0.04480.190955.085646.624625.3376
374.8702-1.0651.82933.58880.27585.3105-0.3741-0.43280.37780.48340.1683-0.3289-0.40.06920.25160.2252-0.026-0.02250.155-0.02670.178153.894848.648127.7457
386.2803-1.8563-0.35252.8268-0.09352.37510.01250.1026-0.0797-0.1651-0.02820.1691-0.0558-0.06280.01740.1513-0.0034-0.00220.1316-0.00890.15844.438145.00659.9437
391.90590.4606-0.15432.6035-1.19583.2866-0.00970.1237-0.0353-0.1156-0.0359-0.22820.05660.28090.06170.1162-0.00390.02680.1563-0.02250.179157.117742.44914.05
403.79890.852-1.33644.6427-1.31065.2237-0.1215-0.1551-0.17690.04520.0713-0.53550.28380.50180.11650.12330.0266-0.0020.2005-0.01320.256764.589639.49618.7134
418.4332-1.315.59241.6635-3.01326.85430.11720.3641-0.2305-0.2009-0.03580.11280.19860.1126-0.04240.1563-0.01990.02920.1622-0.02950.151451.437642.40077.8818
421.83310.21711.1631.8635-0.8055.9498-0.1798-0.08570.17670.11730.1010.0598-0.5052-0.23840.07710.21130.0227-0.00160.1658-0.02320.167611.121518.7608-20.6782
435.2384-1.1103-0.62886.7433-1.62238.1070.0065-0.247-0.28320.3067-0.0693-0.13290.33950.24530.00520.2644-0.0708-0.00580.2116-0.00440.201914.37062.0131-20.7957
441.6691-0.147-0.04841.8424-0.60663.3024-0.0596-0.08350.1370.19260.027-0.1902-0.21550.30630.03950.1764-0.03650.00670.1746-0.02840.159122.49714.738-18.7462
453.5622-0.45091.81093.22460.28266.6283-0.293-0.26040.19620.21260.0533-0.1913-0.24840.12830.28620.1551-0.03760.00060.1491-0.00530.138221.207716.5696-16.2202
464.8318-1.7037-0.22182.099-0.21032.4964-0.08150.183-0.107-0.2327-0.02050.01410.05580.07530.08050.1758-0.02430.01080.1357-0.01280.13712.423514.6091-34.547
472.12660.1692-0.01522.4565-0.61183.2643-0.00410.2216-0.0284-0.1279-0.0646-0.30240.12860.4470.08290.1473-0.00670.04950.2011-0.01320.192326.835211.3165-29.7609
484.55260.3139-0.75683.98010.62067.3333-0.0182-0.0665-0.0307-0.00620.1431-0.4730.78321.0917-0.07280.21560.0972-0.00030.27770.01720.314832.08785.6137-22.8067
498.6273-2.02486.65132.4866-3.84837.72570.01620.4347-0.0687-0.2381-0.1256-0.08970.26770.17820.0890.19-0.04040.0490.2002-0.01040.154219.481912.133-36.5707
503.06992.60460.23694.68520.15632.4231-0.0555-0.0282-0.18860.05090.0845-0.43160.02760.1265-0.00850.1686-0.0019-0.02520.19750.0120.224454.391743.0923-24.3112
515.0026-1.072-0.22662.3416-3.48346.22440.01660.21630.5575-0.31860.08280.36-0.51130.085-0.05250.3242-0.0345-0.05890.22540.0280.227244.239753.5302-33.7592
522.60760.7121-0.48572.83550.13141.90.0355-0.2180.18070.0876-0.06090.0257-0.1654-0.02420.03120.1816-0.0136-0.03680.2029-0.00140.16948.068151.9902-18.6294
533.97621.07280.53294.28540.93643.0448-0.0075-0.19240.2980.32680.0052-0.1678-0.21830.1025-0.01040.2242-0.035-0.02880.17750.01450.154851.427652.1811-18.2469
542.6254-0.7078-1.54142.78571.42852.5462-0.0177-0.026-0.1079-0.1280.01030.23910.0098-0.1624-0.00520.1555-0.0165-0.04120.19420.0190.158241.672236.3248-26.6106
552.20140.2794-0.05492.8971-0.11293.04420.0102-0.07330.22770.0108-0.02360.4602-0.1717-0.19420.00870.12980.0207-0.0140.1977-0.0050.216636.423148.2208-18.147
565.70781.2544-0.70816.2726-0.4616.9522-0.1166-0.38521.44750.10560.10770.9219-0.8495-0.4084-0.08940.28990.0752-0.03540.2218-0.00840.455235.99258.6051-17.8328
571.4516-0.1941-1.24222.87743.87445.7871-0.01080.20.0336-0.0213-0.05470.27130.0822-0.39830.03170.1275-0.0302-0.01450.23170.030.195935.511139.5904-23.2384
582.067-1.5801-0.03623.620.1722.19240.09090.10570.1701-0.2801-0.0133-0.426-0.14620.2748-0.05320.1334-0.00550.06290.2258-0.00990.275923.726966.98953.9582
595.45671.40191.11092.0641-0.80054.17380.1751-0.1558-0.52480.1434-0.1990.03750.31830.01150.06140.19210.02340.03880.20750.0320.212913.11756.728913.0733
603.50910.08970.36873.3791-0.77545.69320.11060.3135-0.0658-0.48840.0256-0.0767-0.03850.1765-0.1120.1630.02710.02540.1752-0.01010.157216.100662.1376-3.0646
613.9015-0.2393.78972.690.48687.99220.2520.3817-0.2695-0.2521-0.1492-0.09230.5480.2759-0.16180.22270.0379-0.0070.2059-0.03840.267516.688154.805-0.0269
623.7968-0.91960.1972.60680.80973.75280.02940.4101-0.5956-0.3475-0.049-0.19660.38870.2685-0.0220.22940.05130.07850.2209-0.02930.254619.598358.6688-2.4507
634.61321.55642.78353.36161.04273.83660.00660.00770.2428-0.0198-0.01130.1187-0.3295-0.0263-0.0040.19250.00680.03940.1784-0.00470.161312.117774.91687.477
641.9492-0.63240.58833.788-0.96192.6649-0.07640.0535-0.0903-0.28570.08550.3136-0.0676-0.2539-0.00690.1363-0.0039-0.01610.1781-0.00370.14155.937265.6767-0.3089
653.8046-0.03511.47934.3591-1.73354.87270.06190.0573-0.4621-0.3350.13050.19820.3397-0.2096-0.23890.2048-0.0339-0.04680.1791-0.01990.21692.854257.3143-3.3507
661.69781.17562.15592.72354.16666.4101-0.0278-0.15670.305-0.2517-0.13410.3243-0.475-0.44310.12240.15630.0586-0.00010.19320.01280.1815.46872.56824.2805
671.7538-1.0087-0.07834.18930.59812.0269-0.05890.20120.1973-0.33290.093-0.2954-0.29770.1196-0.02260.189-0.07150.040.2560.01350.200452.959636.7385-41.4377
686.1215-1.42360.8549.03-2.0446.24670.0023-0.2383-0.5213-0.064-0.09840.36980.53450.14030.15280.2115-0.01620.02410.24490.03850.166643.176526.6663-31.1386
691.8633-0.1149-0.1192.2756-0.49155.4673-0.11420.383-0.1473-0.4080.1126-0.197-0.02350.12840.02320.1821-0.0470.02770.2616-0.00470.127246.369431.2245-44.7184
702.0321-1.6390.47491.49940.26237.8181-0.08620.59650.0283-0.68860.1005-0.0205-0.3987-0.2749-0.01710.3652-0.0933-0.00140.321-0.00450.141443.716430.4248-50.9179
713.4541-0.25091.38212.99750.01613.4919-0.09350.3632-0.2437-0.53960.1624-0.00070.20860.1771-0.03870.2035-0.02790.00230.1756-0.00340.141945.969323.6902-44.2783
723.4499-0.0293-0.62295.74950.53223.1216-0.23590.3557-0.3169-0.88090.3253-0.27430.07110.1821-0.1030.2793-0.03280.03190.2571-0.01330.104648.831627.4204-46.9757
735.08811.60082.23653.55421.1793.4921-0.0723-0.13210.2513-0.0440.01210.2662-0.3208-0.16440.05830.2056-0.0012-0.00820.17090.02840.140341.453944.0626-37.7717
741.4556-0.29950.42062.49140.12842.9266-0.21720.16820.0617-0.53090.14130.4322-0.0516-0.27860.03630.227-0.0571-0.07090.26710.03080.18335.026934.2785-44.6216
753.6865-1.01481.23134.4505-2.19754.4064-0.0837-0.132-0.2267-0.28440.17380.37180.3012-0.4336-0.1540.2978-0.1018-0.07810.29920.01570.244232.097825.5927-47.0277
761.69162.20661.96843.44783.57194.0769-0.13990.03120.28690.02640.1390.4695-0.2447-0.27240.08460.23290.0158-0.03950.26010.0520.24134.678841.3923-40.4418
773.0632-0.65460.75032.8619-0.48581.6318-0.0746-0.4099-0.16130.17650.02210.17030.0436-0.26560.02830.1763-0.01670.03150.27040.00320.1501-4.032210.1487-26.9639
786.0674-1.05690.44622.6164-2.45672.52070.0280.37320.3728-0.0608-0.15080.222-0.2684-0.07090.11340.219-0.02040.02530.20620.00550.2143.874117.4256-40.3531
791.69080.38770.2892.87930.49862.81360.06430.083-0.1017-0.0872-0.06490.30940.1232-0.43870.01450.1402-0.03560.02130.2544-0.0260.1892-8.43977.8995-37.8651
801.77370.21841.11073.28592.04484.07830.0864-0.1306-0.19040.1729-0.1009-0.11750.24940.08780.00080.1508-0.0376-0.0020.2080.03380.14768.18712.6999-29.6486
811.68160.30670.93632.94680.12993.23510.17230.1576-0.1749-0.0982-0.07820.01430.2508-0.0308-0.08750.1923-0.01030.01220.1788-0.0350.15450.8455-0.172-42.9815
825.4241-2.791-0.72336.40931.90313.29930.33990.629-0.2899-0.6092-0.43310.27350.1104-0.24070.08010.2758-0.0189-0.01370.3002-0.01730.166-3.28154.4427-51.3709
835.6456-0.41834.41362.7113-0.51423.42810.1804-0.0202-0.21140.0974-0.0905-0.25860.12960.0135-0.03680.2476-0.0071-0.00140.1569-0.01910.24358.3745-1.0522-36.4281
843.05410.8596-1.63282.295-0.83732.3509-0.15560.43690.1126-0.21520.12440.04220.0803-0.28460.01870.327-0.0158-0.0470.2780.03310.181926.1635-23.9861-38.4484
855.55191.021-1.76138.8879-4.28912.4112-0.039-0.281-0.45540.31690.06780.17180.2421-0.1303-0.02680.31460.0017-0.00610.19720.02820.219833.9503-31.6283-25.0819
862.2545-0.1441-0.64641.83580.00542.60830.10540.01860.0938-0.0598-0.03280.2203-0.0187-0.2401-0.08480.2391-0.0144-0.0220.20220.0190.197122.1428-22.2047-26.5707
875.96480.9153-1.66893.423-0.17483.58950.09720.35570.16340.09240.13780.30980.1032-0.6055-0.22930.23490.01-0.0240.16030.0260.226719.7824-23.5732-28.7256
882.18510.0472-1.27782.7521.37885.2350.08830.12450.1703-0.03550.0317-0.1344-0.15120.1433-0.150.22050.021-0.02580.1760.02630.169437.7273-16.642-35.3893
892.80690.1511-0.76252.7578-0.85322.39570.1082-0.0850.2710.1317-0.0025-0.0335-0.27480.0411-0.1020.2662-0.003-0.01310.126-0.02480.154431.2069-14.4954-23.5337
903.20160.8613-0.14288.6364-1.62373.46540.1754-0.31450.17490.6748-0.01240.1177-0.274-0.0521-0.14730.3041-0.0113-0.00290.2254-0.02940.164826.9301-16.5496-15.3105
916.8850.8056-5.25592.2707-0.67973.9270.0342-0.07740.23380.1554-0.0052-0.2768-0.12370.1808-0.05120.2944-0.0158-0.01250.1379-0.0180.232637.6896-12.9352-28.4851
921.9690.1027-1.46281.0374-0.8584.0251-0.18480.1369-0.337-0.1250.0232-0.06930.6289-0.09050.13610.3752-0.04450.00050.1837-0.03620.235913.917161.4844-44.2207
935.7567-0.36981.46586.4883-0.92847.09240.00260.33330.3656-0.48120.1098-0.1212-0.81380.1641-0.13160.32070.01650.02110.16970.00930.188615.995678.4459-44.3071
943.3940.8917-0.9042.10760.33642.4588-0.15270.0773-0.4378-0.07260.1225-0.37260.20570.16580.03840.22860.0227-0.01480.1475-0.02490.225625.07566.3393-46.0439
954.67530.5734-2.1353.32140.52525.149-0.30440.3131-0.3272-0.45950.1641-0.12510.50060.07160.19970.27060.0492-0.00090.1692-0.01560.229323.903864.2781-48.5397
966.49012.2701-0.912.7594-0.37153.21370.0972-0.3307-0.03610.3732-0.18750.13630.230.18060.08150.26290.00380.00540.12690.02020.17314.663565.8283-30.5159
973.9454-0.3545-1.2383.3951-1.19143.26480.0911-0.5292-0.19160.1989-0.1517-0.26240.030.43570.03830.1881-0.0115-0.05950.22310.01860.220427.160469.5168-34.294
985.0833-0.26791.00235.7874-1.76187.41320.2286-0.3574-0.22930.2287-0.1385-0.4198-0.0460.6529-0.04840.1524-0.0187-0.03950.2542-00.22934.044873.9924-39.3141
998.1141.592-6.0151.5389-2.49226.23680.0845-1.0275-0.16080.3624-0.2778-0.2459-0.10710.43950.17670.2577-0.0078-0.07610.31650.03080.177121.540968.7786-28.3316
Refinement TLS group
IDRefine-IDRefine TLS-IDSelection details
1X-RAY DIFFRACTION1chain 'A' and (resid 1 through 17 )
2X-RAY DIFFRACTION2chain 'A' and (resid 18 through 26 )
3X-RAY DIFFRACTION3chain 'A' and (resid 27 through 57 )
4X-RAY DIFFRACTION4chain 'A' and (resid 58 through 69 )
5X-RAY DIFFRACTION5chain 'A' and (resid 70 through 84 )
6X-RAY DIFFRACTION6chain 'A' and (resid 85 through 116 )
7X-RAY DIFFRACTION7chain 'A' and (resid 117 through 134 )
8X-RAY DIFFRACTION8chain 'A' and (resid 135 through 143 )
9X-RAY DIFFRACTION9chain 'B' and (resid 1 through 17 )
10X-RAY DIFFRACTION10chain 'B' and (resid 18 through 44 )
11X-RAY DIFFRACTION11chain 'B' and (resid 45 through 57 )
12X-RAY DIFFRACTION12chain 'B' and (resid 58 through 69 )
13X-RAY DIFFRACTION13chain 'B' and (resid 70 through 84 )
14X-RAY DIFFRACTION14chain 'B' and (resid 85 through 116 )
15X-RAY DIFFRACTION15chain 'B' and (resid 117 through 134 )
16X-RAY DIFFRACTION16chain 'B' and (resid 135 through 143 )
17X-RAY DIFFRACTION17chain 'C' and (resid 1 through 8 )
18X-RAY DIFFRACTION18chain 'C' and (resid 9 through 17 )
19X-RAY DIFFRACTION19chain 'C' and (resid 18 through 26 )
20X-RAY DIFFRACTION20chain 'C' and (resid 27 through 44 )
21X-RAY DIFFRACTION21chain 'C' and (resid 45 through 57 )
22X-RAY DIFFRACTION22chain 'C' and (resid 58 through 69 )
23X-RAY DIFFRACTION23chain 'C' and (resid 70 through 84 )
24X-RAY DIFFRACTION24chain 'C' and (resid 85 through 126 )
25X-RAY DIFFRACTION25chain 'C' and (resid 127 through 134 )
26X-RAY DIFFRACTION26chain 'C' and (resid 135 through 143 )
27X-RAY DIFFRACTION27chain 'D' and (resid 1 through 17 )
28X-RAY DIFFRACTION28chain 'D' and (resid 18 through 26 )
29X-RAY DIFFRACTION29chain 'D' and (resid 27 through 57 )
30X-RAY DIFFRACTION30chain 'D' and (resid 58 through 69 )
31X-RAY DIFFRACTION31chain 'D' and (resid 70 through 84 )
32X-RAY DIFFRACTION32chain 'D' and (resid 85 through 134 )
33X-RAY DIFFRACTION33chain 'D' and (resid 135 through 143 )
34X-RAY DIFFRACTION34chain 'E' and (resid 1 through 17 )
35X-RAY DIFFRACTION35chain 'E' and (resid 18 through 26 )
36X-RAY DIFFRACTION36chain 'E' and (resid 27 through 57 )
37X-RAY DIFFRACTION37chain 'E' and (resid 58 through 69 )
38X-RAY DIFFRACTION38chain 'E' and (resid 70 through 84 )
39X-RAY DIFFRACTION39chain 'E' and (resid 85 through 116 )
40X-RAY DIFFRACTION40chain 'E' and (resid 117 through 134 )
41X-RAY DIFFRACTION41chain 'E' and (resid 135 through 143 )
42X-RAY DIFFRACTION42chain 'F' and (resid 1 through 17 )
43X-RAY DIFFRACTION43chain 'F' and (resid 18 through 26 )
44X-RAY DIFFRACTION44chain 'F' and (resid 27 through 57 )
45X-RAY DIFFRACTION45chain 'F' and (resid 58 through 69 )
46X-RAY DIFFRACTION46chain 'F' and (resid 70 through 84 )
47X-RAY DIFFRACTION47chain 'F' and (resid 85 through 126 )
48X-RAY DIFFRACTION48chain 'F' and (resid 127 through 134 )
49X-RAY DIFFRACTION49chain 'F' and (resid 135 through 143 )
50X-RAY DIFFRACTION50chain 'G' and (resid 1 through 17 )
51X-RAY DIFFRACTION51chain 'G' and (resid 18 through 26 )
52X-RAY DIFFRACTION52chain 'G' and (resid 27 through 57 )
53X-RAY DIFFRACTION53chain 'G' and (resid 58 through 69 )
54X-RAY DIFFRACTION54chain 'G' and (resid 70 through 84 )
55X-RAY DIFFRACTION55chain 'G' and (resid 85 through 126 )
56X-RAY DIFFRACTION56chain 'G' and (resid 127 through 134 )
57X-RAY DIFFRACTION57chain 'G' and (resid 135 through 143 )
58X-RAY DIFFRACTION58chain 'H' and (resid 1 through 17 )
59X-RAY DIFFRACTION59chain 'H' and (resid 18 through 26 )
60X-RAY DIFFRACTION60chain 'H' and (resid 27 through 44 )
61X-RAY DIFFRACTION61chain 'H' and (resid 45 through 57 )
62X-RAY DIFFRACTION62chain 'H' and (resid 58 through 69 )
63X-RAY DIFFRACTION63chain 'H' and (resid 70 through 84 )
64X-RAY DIFFRACTION64chain 'H' and (resid 85 through 116 )
65X-RAY DIFFRACTION65chain 'H' and (resid 117 through 134 )
66X-RAY DIFFRACTION66chain 'H' and (resid 135 through 143 )
67X-RAY DIFFRACTION67chain 'I' and (resid 1 through 17 )
68X-RAY DIFFRACTION68chain 'I' and (resid 18 through 26 )
69X-RAY DIFFRACTION69chain 'I' and (resid 27 through 35 )
70X-RAY DIFFRACTION70chain 'I' and (resid 36 through 44 )
71X-RAY DIFFRACTION71chain 'I' and (resid 45 through 57 )
72X-RAY DIFFRACTION72chain 'I' and (resid 58 through 69 )
73X-RAY DIFFRACTION73chain 'I' and (resid 70 through 84 )
74X-RAY DIFFRACTION74chain 'I' and (resid 85 through 116 )
75X-RAY DIFFRACTION75chain 'I' and (resid 117 through 134 )
76X-RAY DIFFRACTION76chain 'I' and (resid 135 through 143 )
77X-RAY DIFFRACTION77chain 'J' and (resid 1 through 17 )
78X-RAY DIFFRACTION78chain 'J' and (resid 18 through 26 )
79X-RAY DIFFRACTION79chain 'J' and (resid 27 through 69 )
80X-RAY DIFFRACTION80chain 'J' and (resid 70 through 84 )
81X-RAY DIFFRACTION81chain 'J' and (resid 85 through 126 )
82X-RAY DIFFRACTION82chain 'J' and (resid 127 through 134 )
83X-RAY DIFFRACTION83chain 'J' and (resid 135 through 143 )
84X-RAY DIFFRACTION84chain 'K' and (resid 1 through 17 )
85X-RAY DIFFRACTION85chain 'K' and (resid 18 through 26 )
86X-RAY DIFFRACTION86chain 'K' and (resid 27 through 57 )
87X-RAY DIFFRACTION87chain 'K' and (resid 58 through 69 )
88X-RAY DIFFRACTION88chain 'K' and (resid 70 through 84 )
89X-RAY DIFFRACTION89chain 'K' and (resid 85 through 116 )
90X-RAY DIFFRACTION90chain 'K' and (resid 117 through 134 )
91X-RAY DIFFRACTION91chain 'K' and (resid 135 through 143 )
92X-RAY DIFFRACTION92chain 'L' and (resid 1 through 17 )
93X-RAY DIFFRACTION93chain 'L' and (resid 18 through 26 )
94X-RAY DIFFRACTION94chain 'L' and (resid 27 through 57 )
95X-RAY DIFFRACTION95chain 'L' and (resid 58 through 69 )
96X-RAY DIFFRACTION96chain 'L' and (resid 70 through 84 )
97X-RAY DIFFRACTION97chain 'L' and (resid 85 through 116 )
98X-RAY DIFFRACTION98chain 'L' and (resid 117 through 134 )
99X-RAY DIFFRACTION99chain 'L' and (resid 135 through 143 )

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