[English] 日本語
Yorodumi
- PDB-5iwa: Crystal structure of the 30S ribosomal subunit from Thermus therm... -

+
Open data


ID or keywords:

Loading...

-
Basic information

Entry
Database: PDB / ID: 5iwa
TitleCrystal structure of the 30S ribosomal subunit from Thermus thermophilus in complex with the GE81112 peptide antibiotic
Components
  • (30S ribosomal protein ...) x 20
  • 16S ribosomal RNA
KeywordsTRANSLATION / protein synthesis / translation initiation / ribosome / antibiotic
Function / homology
Function and homology information


ribosomal small subunit assembly / small ribosomal subunit / cytosolic small ribosomal subunit / tRNA binding / rRNA binding / ribosome / structural constituent of ribosome / translation / ribonucleoprotein complex / mRNA binding ...ribosomal small subunit assembly / small ribosomal subunit / cytosolic small ribosomal subunit / tRNA binding / rRNA binding / ribosome / structural constituent of ribosome / translation / ribonucleoprotein complex / mRNA binding / zinc ion binding / metal ion binding / cytosol / cytoplasm
Similarity search - Function
Ribosomal protein S4/S9, N-terminal domain / Ribosomal Protein S4 Delta 41; Chain A, domain 1 / S16 Ribosomal Protein; Chain: A; / Ribosomal protein S16 / 30s ribosomal protein s13; domain 2 / Ribosomal protein S13/S18, C-terminal domain / Ribosomal protein S20 / 30s Ribosomal Protein S19; Chain A / Ribosomal protein S19/S15 / Ribosomal protein S3, C-terminal domain ...Ribosomal protein S4/S9, N-terminal domain / Ribosomal Protein S4 Delta 41; Chain A, domain 1 / S16 Ribosomal Protein; Chain: A; / Ribosomal protein S16 / 30s ribosomal protein s13; domain 2 / Ribosomal protein S13/S18, C-terminal domain / Ribosomal protein S20 / 30s Ribosomal Protein S19; Chain A / Ribosomal protein S19/S15 / Ribosomal protein S3, C-terminal domain / Ribosomal Protein S14/S29 / 30s Ribosomal Protein S14; Chain N / Ribosomal Protein S8; Chain: A, domain 1 - #30 / RNA-binding S4 domain / Ribosomal Protein S7 / Ribosomal protein S7/S5 / Ribosomal protein S6/Translation elongation factor EF1B / Ribosomal protein S3 C-terminal domain / Helix hairpin bin / Dna Ligase; domain 1 - #10 / Ribosomal protein S11/S14 / Ribosomal protein S10 / Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A / S15/NS1, RNA-binding / K homology (KH) domain / Double Stranded RNA Binding Domain - #20 / Helicase, Ruva Protein; domain 3 - #50 / Glucose-6-phosphate isomerase like protein; domain 1 / Ribosomal Protein S8; Chain: A, domain 1 / Ribosomal Protein S5; domain 2 - #10 / 30S ribosomal protein Thx / 30S ribosomal protein Thx / 30S ribosomal protein / GMP Synthetase; Chain A, domain 3 / Ribosomal Protein S5; domain 2 / Double Stranded RNA Binding Domain / Ribosomal protein S14, type Z / Helicase, Ruva Protein; domain 3 / Nucleic acid-binding proteins / Dna Ligase; domain 1 / Methane Monooxygenase Hydroxylase; Chain G, domain 1 / Ribosomal protein S14/S29 / Ribosomal protein S3, bacterial-type / Ribosomal protein S6, conserved site / Ribosomal protein S6 signature. / Ribosomal protein S19, bacterial-type / Ribosomal protein S13, bacterial-type / Ribosomal protein S7, bacterial/organellar-type / Ribosomal protein S11, bacterial-type / Ribosomal protein S20 / Ribosomal protein S20 superfamily / Ribosomal protein S20 / Ribosomal protein S9, bacterial/plastid / Ribosomal protein S4, bacterial-type / 30S ribosomal protein S17 / Ribosomal protein S5, bacterial-type / Ribosomal protein S6, plastid/chloroplast / Ribosomal protein S2, bacteria/mitochondria/plastid / Ribosomal protein S18, conserved site / Ribosomal protein S18 signature. / Ribosomal protein S16 / Ribosomal protein S16 domain superfamily / Ribosomal protein S16 / Ribosomal protein S15, bacterial-type / Ribosomal protein S6 / Ribosomal protein S6 / Ribosomal protein S6 superfamily / Ribosomal protein S12, bacterial-type / Translation elongation factor EF1B/ribosomal protein S6 / Ribosomal protein S18 / Ribosomal protein S18 / Ribosomal protein S18 superfamily / K Homology domain / K homology RNA-binding domain / Few Secondary Structures / Irregular / Ribosomal protein S10, conserved site / Ribosomal protein S10 signature. / Ribosomal protein S3, conserved site / Ribosomal protein S3 signature. / Ribosomal protein S14, conserved site / Ribosomal protein S14 signature. / Ribosomal protein S2 signature 1. / OB fold (Dihydrolipoamide Acetyltransferase, E2P) / KH domain / Type-2 KH domain profile. / K Homology domain, type 2 / Ribosomal protein S3, C-terminal / Ribosomal protein S3, C-terminal domain / Ribosomal protein S3, C-terminal domain superfamily / Ribosomal protein S15/S19, conserved site / Ribosomal protein S19 signature. / Ribosomal protein S10 / : / Ribosomal protein S19/S15 / Ribosomal protein S19/S15, superfamily / Ribosomal protein S19 / Ribosomal protein S2, conserved site / Ribosomal protein S5, N-terminal, conserved site / Ribosomal protein S5 signature.
Similarity search - Domain/homology
Chem-6EK / : / RNA / RNA (> 10) / RNA (> 100) / RNA (> 1000) / Small ribosomal subunit protein uS14 / Small ribosomal subunit protein uS17 / Small ribosomal subunit protein uS8 / Small ribosomal subunit protein uS7 ...Chem-6EK / : / RNA / RNA (> 10) / RNA (> 100) / RNA (> 1000) / Small ribosomal subunit protein uS14 / Small ribosomal subunit protein uS17 / Small ribosomal subunit protein uS8 / Small ribosomal subunit protein uS7 / Small ribosomal subunit protein uS2 / Small ribosomal subunit protein uS3 / Small ribosomal subunit protein uS4 / Small ribosomal subunit protein uS9 / Small ribosomal subunit protein uS11 / Small ribosomal subunit protein uS13 / Small ribosomal subunit protein bS20 / Small ribosomal subunit protein uS12 / Small ribosomal subunit protein uS10 / Small ribosomal subunit protein uS19 / 30S ribosomal protein S17 / 30S ribosomal protein S14 type Z / 30S ribosomal protein S8 / Small ribosomal subunit protein uS5 / Small ribosomal subunit protein bTHX / Small ribosomal subunit protein uS15 / Small ribosomal subunit protein bS16 / Small ribosomal subunit protein bS6 / Small ribosomal subunit protein bS18
Similarity search - Component
Biological speciesThermus thermophilus HB8 (bacteria)
MethodX-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 3.5 Å
AuthorsSchedlbauer, A. / Kaminishi, T. / Ochoa-Lizarralde, B. / Chieko, N. / Masahito, K. / Takemoto, C. / Yokoyama, S. / Connell, S.R. / Fucini, P.
CitationJournal: Proc.Natl.Acad.Sci.USA / Year: 2016
Title: Inhibition of translation initiation complex formation by GE81112 unravels a 16S rRNA structural switch involved in P-site decoding.
Authors: Fabbretti, A. / Schedlbauer, A. / Brandi, L. / Kaminishi, T. / Giuliodori, A.M. / Garofalo, R. / Ochoa-Lizarralde, B. / Takemoto, C. / Yokoyama, S. / Connell, S.R. / Gualerzi, C.O. / Fucini, P.
History
DepositionMar 22, 2016Deposition site: RCSB / Processing site: PDBE
Revision 1.0Apr 27, 2016Provider: repository / Type: Initial release
Revision 1.1Apr 5, 2017Group: Structure summary
Revision 1.2Jan 10, 2024Group: Data collection / Database references ...Data collection / Database references / Derived calculations / Refinement description
Category: chem_comp_atom / chem_comp_bond ...chem_comp_atom / chem_comp_bond / database_2 / pdbx_initial_refinement_model / pdbx_struct_conn_angle / struct_conn
Item: _database_2.pdbx_DOI / _database_2.pdbx_database_accession ..._database_2.pdbx_DOI / _database_2.pdbx_database_accession / _pdbx_struct_conn_angle.ptnr1_auth_comp_id / _pdbx_struct_conn_angle.ptnr1_auth_seq_id / _pdbx_struct_conn_angle.ptnr1_label_atom_id / _pdbx_struct_conn_angle.ptnr1_label_comp_id / _pdbx_struct_conn_angle.ptnr1_label_seq_id / _pdbx_struct_conn_angle.ptnr2_auth_seq_id / _pdbx_struct_conn_angle.ptnr2_label_asym_id / _pdbx_struct_conn_angle.ptnr3_auth_seq_id / _pdbx_struct_conn_angle.ptnr3_label_atom_id / _pdbx_struct_conn_angle.ptnr3_label_seq_id / _pdbx_struct_conn_angle.value / _struct_conn.pdbx_dist_value / _struct_conn.ptnr1_label_atom_id / _struct_conn.ptnr2_auth_seq_id / _struct_conn.ptnr2_label_asym_id

-
Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

Downloads & links

-
Assembly

Deposited unit
B: 30S ribosomal protein S2
C: 30S ribosomal protein S3
D: 30S ribosomal protein S4
E: 30S ribosomal protein S5
F: 30S ribosomal protein S6
G: 30S ribosomal protein S7
H: 30S ribosomal protein S8
I: 30S ribosomal protein S9
J: 30S ribosomal protein S10
K: 30S ribosomal protein S11
L: 30S ribosomal protein S12
M: 30S ribosomal protein S13
N: 30S ribosomal protein S14 type Z
O: 30S ribosomal protein S15
P: 30S ribosomal protein S16
Q: 30S ribosomal protein S17
R: 30S ribosomal protein S18
S: 30S ribosomal protein S19
T: 30S ribosomal protein S20
V: 30S ribosomal protein Thx
A: 16S ribosomal RNA
hetero molecules


Theoretical massNumber of molelcules
Total (without water)769,657228
Polymers763,90921
Non-polymers5,748207
Water00
1


  • Idetical with deposited unit
  • defined by software
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area93840 Å2
ΔGint-792 kcal/mol
Surface area277680 Å2
MethodPISA
Unit cell
Length a, b, c (Å)413.140, 413.140, 173.630
Angle α, β, γ (deg.)90.000, 90.000, 90.000
Int Tables number92
Space group name H-MP41212

-
Components

-
30S ribosomal protein ... , 20 types, 20 molecules BCDEFGHIJKLMNOPQRSTV

#1: Protein 30S ribosomal protein S2


Mass: 26159.344 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Thermus thermophilus HB8 (bacteria) / References: UniProt: P80371
#2: Protein 30S ribosomal protein S3


Mass: 22862.430 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Thermus thermophilus HB8 (bacteria) / References: UniProt: P80372
#3: Protein 30S ribosomal protein S4


Mass: 24242.254 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Thermus thermophilus HB8 (bacteria) / References: UniProt: P80373
#4: Protein 30S ribosomal protein S5


Mass: 17067.834 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Thermus thermophilus HB8 (bacteria) / References: UniProt: Q5SHQ5
#5: Protein 30S ribosomal protein S6 / TS9


Mass: 11988.753 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Thermus thermophilus HB8 (bacteria) / References: UniProt: Q5SLP8
#6: Protein 30S ribosomal protein S7


Mass: 17919.775 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Thermus thermophilus HB8 (bacteria) / References: UniProt: P17291
#7: Protein 30S ribosomal protein S8


Mass: 15868.570 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Thermus thermophilus HB8 (bacteria) / References: UniProt: Q5SHQ2, UniProt: P0DOY9*PLUS
#8: Protein 30S ribosomal protein S9


Mass: 14279.419 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Thermus thermophilus HB8 (bacteria) / References: UniProt: P80374
#9: Protein 30S ribosomal protein S10


Mass: 11398.308 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Thermus thermophilus HB8 (bacteria) / References: UniProt: Q5SHN7
#10: Protein 30S ribosomal protein S11


Mass: 12161.841 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Thermus thermophilus HB8 (bacteria) / References: UniProt: P80376
#11: Protein 30S ribosomal protein S12


Mass: 13804.311 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Thermus thermophilus HB8 (bacteria) / References: UniProt: Q5SHN3
#12: Protein 30S ribosomal protein S13


Mass: 14207.666 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Thermus thermophilus HB8 (bacteria) / References: UniProt: P80377
#13: Protein 30S ribosomal protein S14 type Z


Mass: 7027.529 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Thermus thermophilus HB8 (bacteria) / References: UniProt: Q5SHQ1, UniProt: P0DOY6*PLUS
#14: Protein 30S ribosomal protein S15


Mass: 10447.213 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Thermus thermophilus HB8 (bacteria) / References: UniProt: Q5SJ76
#15: Protein 30S ribosomal protein S16


Mass: 10152.740 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Thermus thermophilus HB8 (bacteria) / References: UniProt: Q5SJH3
#16: Protein 30S ribosomal protein S17


Mass: 12194.460 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Thermus thermophilus HB8 (bacteria) / References: UniProt: Q5SHP7, UniProt: P0DOY7*PLUS
#17: Protein 30S ribosomal protein S18


Mass: 8313.005 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Thermus thermophilus HB8 (bacteria) / References: UniProt: Q5SLQ0
#18: Protein 30S ribosomal protein S19


Mass: 9455.995 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Thermus thermophilus HB8 (bacteria) / References: UniProt: Q5SHP2
#19: Protein 30S ribosomal protein S20


Mass: 11405.740 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Thermus thermophilus HB8 (bacteria) / References: UniProt: P80380
#20: Protein/peptide 30S ribosomal protein Thx / S31


Mass: 2960.475 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Thermus thermophilus HB8 (bacteria) / References: UniProt: Q5SIH3

-
RNA chain , 1 types, 1 molecules A

#21: RNA chain 16S ribosomal RNA


Mass: 489991.125 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Thermus thermophilus HB8 (bacteria) / References: GenBank: 55771382

-
Non-polymers , 3 types, 207 molecules

#22: Chemical...
ChemComp-MG / MAGNESIUM ION


Mass: 24.305 Da / Num. of mol.: 204 / Source method: obtained synthetically / Formula: Mg
#23: Chemical ChemComp-ZN / ZINC ION


Mass: 65.409 Da / Num. of mol.: 2 / Source method: obtained synthetically / Formula: Zn
#24: Chemical ChemComp-6EK / (2S,3S)-2-{[(2S)-3-(2-amino-1H-imidazol-5-yl)-2-{[(2S,4S)-5-(carbamoyloxy)-4-hydroxy-2-({[(2S,3S)-3-hydroxypiperidin-2-yl]carbonyl}amino)pentanoyl]amino}propanoyl]amino}-3-(2-chloro-1H-imidazol-5-yl)-3-hydroxypropanoic acid


Mass: 659.049 Da / Num. of mol.: 1 / Source method: obtained synthetically / Formula: C24H35ClN10O10

-
Experimental details

-
Experiment

ExperimentMethod: X-RAY DIFFRACTION / Number of used crystals: 1

-
Sample preparation

CrystalDensity Matthews: 4.85 Å3/Da / Density % sol: 74.64 %
Crystal growTemperature: 292 K / Method: vapor diffusion, hanging drop
Details: HEPES-KOH, MgCl2, NH4Cl, beta-mercaptoethanol, MPD, spermidine

-
Data collection

DiffractionMean temperature: 90 K
Diffraction sourceSource: SYNCHROTRON / Site: SLS / Beamline: X06SA / Wavelength: 1 Å
DetectorType: PSI PILATUS 6M / Detector: PIXEL / Date: Aug 16, 2010
RadiationProtocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M / Scattering type: x-ray
Radiation wavelengthWavelength: 1 Å / Relative weight: 1
ReflectionResolution: 3.5→160 Å / Num. obs: 187400 / % possible obs: 99.9 % / Observed criterion σ(I): -3 / Redundancy: 11.3 % / Rmerge(I) obs: 0.165 / Net I/σ(I): 9.79
Reflection shellResolution: 3.5→3.69 Å / Redundancy: 11.6 % / Rmerge(I) obs: 2.379 / Mean I/σ(I) obs: 1.46 / % possible all: 99.6

-
Processing

Software
NameVersionClassification
PHENIX1.7.3_928refinement
XDSVERSION May 10, 2010data reduction
XSCALEVERSION May 10, 2010data scaling
PHENIXphasing
Cootmodel building
PDB_EXTRACT3.15data extraction
RefinementMethod to determine structure: MOLECULAR REPLACEMENT
Starting model: 2ZM6

2zm6


Resolution: 3.5→80.034 Å / SU ML: 0.43 / Cross valid method: FREE R-VALUE / σ(F): 1.33 / Phase error: 21.94
RfactorNum. reflection% reflection
Rfree0.2177 9368 5.01 %
Rwork0.1661 --
obs0.1687 187167 99.81 %
Solvent computationShrinkage radii: 0.86 Å / VDW probe radii: 1.1 Å / Bsol: 76.191 Å2 / ksol: 0.249 e/Å3
Displacement parametersBiso max: 366.29 Å2 / Biso mean: 146.2449 Å2 / Biso min: 58.74 Å2
Baniso -1Baniso -2Baniso -3
1-9.1813 Å20 Å2-0 Å2
2--9.1813 Å2-0 Å2
3----18.3625 Å2
Refinement stepCycle: final / Resolution: 3.5→80.034 Å
ProteinNucleic acidLigandSolventTotal
Num. atoms19249 32435 251 0 51935
Biso mean--129.84 --
Num. residues----3907
Refine LS restraints
Refine-IDTypeDev idealNumber
X-RAY DIFFRACTIONf_bond_d0.02356478
X-RAY DIFFRACTIONf_angle_d1.17583245
X-RAY DIFFRACTIONf_chiral_restr0.0710441
X-RAY DIFFRACTIONf_plane_restr0.0064924
X-RAY DIFFRACTIONf_dihedral_angle_d15.74825986
LS refinement shell

Refine-ID: X-RAY DIFFRACTION / Total num. of bins used: 30

Resolution (Å)Rfactor RfreeNum. reflection RfreeRfactor RworkNum. reflection RworkNum. reflection all% reflection obs (%)
3.5002-3.540.38443130.33525614592796
3.54-3.58160.3633200.299358306150100
3.5816-3.62530.34442890.284659376226100
3.6253-3.67120.3232910.271858956186100
3.6712-3.71950.32163320.258758146146100
3.7195-3.77050.27923050.238658946199100
3.7705-3.82430.27663030.230758656168100
3.8243-3.88140.26022990.221758806179100
3.8814-3.94210.28792990.215459296228100
3.9421-4.00670.26413090.202958726181100
4.0067-4.07580.24333440.188258646208100
4.0758-4.14990.22873000.180359176217100
4.1499-4.22970.22753600.171258416201100
4.2297-4.3160.19953170.158858736190100
4.316-4.40990.21612990.155459046203100
4.4099-4.51250.22572950.158959196214100
4.5125-4.62530.20323010.150359376238100
4.6253-4.75030.20593070.141759346241100
4.7503-4.89010.18982980.139759146212100
4.8901-5.04790.19613130.139759556268100
5.0479-5.22830.19423150.136259296244100
5.2283-5.43760.18433090.127759526261100
5.4376-5.6850.17043070.126259466253100
5.685-5.98460.18243200.123659816301100
5.9846-6.35940.21292950.135559676262100
6.3594-6.85020.20882920.14360166308100
6.8502-7.53910.20773310.14660096340100
7.5391-8.62890.19783130.144960536366100
8.6289-10.86720.19823370.150460846421100
10.8672-80.05510.21693550.19076274662999
Refinement TLS params.

Method: refined / Refine-ID: X-RAY DIFFRACTION

IDL11 (°2)L12 (°2)L13 (°2)L22 (°2)L23 (°2)L33 (°2)S11 (Å °)S12 (Å °)S13 (Å °)S21 (Å °)S22 (Å °)S23 (Å °)S31 (Å °)S32 (Å °)S33 (Å °)T11 (Å2)T12 (Å2)T13 (Å2)T22 (Å2)T23 (Å2)T33 (Å2)Origin x (Å)Origin y (Å)Origin z (Å)
11.3134-0.75040.38093.86611.71343.5056-0.12950.213-0.0617-0.01880.15790.27430.1596-0.4484-00.7939-0.16590.05241.00840.02640.8603271.539128.314912.916
20.49510.0239-1.1545-0.13150.4492.7820.1146-0.2281-0.08280.72520.0327-0.04650.52420.0536-0.00011.6349-0.04080.190.9426-0.01721.0664282.9564167.228457.0719
31.8825-1.8258-0.29671.7477-0.85233.56380.1179-0.09880.06980.1975-0.26810.0608-0.02410.02560.00010.7076-0.3771-0.06640.8075-0.01610.5965326.0079120.528762.0462
4-0.5466-0.3158-0.481.52490.00390.56230.09420.05240.0734-0.2306-0.02850.3663-0.3701-0.5818-0.00010.8928-0.09610.00450.822-0.06260.8853305.4554127.461329.9277
51.8231-0.29341.10384.1020.77622.99270.26610.7911-0.0187-0.8502-0.2454-0.4201-0.42920.28880.00021.56180.08430.25481.01950.0670.7538306.6628146.8957-58.1966
62.3648-0.4027-1.59360.7860.94241.31780.07220.7294-0.3958-0.3753-0.0885-0.0947-0.0172-0.0944-01.22390.2738-0.02221.18670.24030.9418270.6871200.9196-2.8648
74.3951-2.1036-1.45122.82960.32560.43850.07610.43490.0718-0.0937-0.1185-0.0835-0.0295-0.3738-00.7275-0.1760.00080.5324-0.02480.6063311.6284107.54596.364
80.55420.4432-0.36091.77750.5890.7609-0.0153-0.30730.1415-0.2248-0.1270.316-0.1422-0.2131-00.990.2540.20441.09440.0721.329251.0269195.673921.9768
91.2390.12881.09830.7388-0.46750.91890.35131.5159-1.0590.6134-0.2597-0.1886-0.256-0.84450.13051.20480.110.59431.13980.08481.2325258.3785184.745755.3977
102.2113-0.2136-0.62980.8124-1.07280.6261-0.3193-0.4043-0.15950.34850.50190.1596-0.299-0.2546-0.00021.89460.3986-0.06241.2171-0.01071.1201294.008183.2046-35.7741
110.8990.61010.43351.7302-0.09330.1110.09810.19370.25430.2392-0.0335-0.474-0.39420.19770.00161.0748-0.257-0.03390.8463-0.11160.9964344.5996153.335534.0489
121.0802-0.72261.82381.0735-0.51552.1842-0.0831-0.0943-0.26840.4884-0.03130.0703-0.01640.28690.0011.42170.10110.33470.70160.05921.5945288.5279233.306428.7729
130.4911.1446-0.54060.9251-0.72960.4254-0.0220.32360.45680.8840.58670.71190.27740.36670.00021.35990.08030.16521.1776-0.15361.4821285.7148190.590355.2908
141.98270.7217-1.31231.156-0.09312.90320.04690.4022-0.30520.15220.5897-0.62940.04380.3327-0.00011.35020.07770.01721.2187-0.19190.9891328.7978120.0475-34.5876
150.3648-0.6852-0.70880.58240.64630.54590.3075-0.2466-0.09430.2715-0.0196-0.038-0.3387-0.04-0.00010.9737-0.1547-0.15741.23010.15651.2748364.268796.45542.3501
160.263-0.068-0.52112.00452.07862.1490.057-0.0146-0.13730.0195-0.07130.072-0.07330.2776-01.15320.2614-0.03291.23320.04350.9305352.4707111.0648-8.9717
170.06470.1174-0.33620.5604-0.0352-0.00010.14790.2103-0.746-0.66790.22430.52940.6968-0.43790.0061.55520.00260.18641.2350.0541.0778292.7359150.2245-39.576
181.0315-0.81680.24330.46620.4211.07550.17760.44590.5338-0.16140.0232-0.2277-0.47780.5223-01.9374-0.11020.20871.2449-0.38732.0841303.9649226.348257.6946
190.21510.75730.68580.87411.27060.399-0.2078-0.39260.2155-0.139-0.25090.1155-0.40220.739-0.00621.15990.0584-0.05781.9696-0.0871.5379396.153102.1525.5872
200.1922-0.09420.11830.2327-0.0050.0317-0.40990.2257-0.2631.16130.5542-1.05880.4552-0.81610.00011.75230.02020.52741.3126-0.071.8568273.5352219.154734.6595
211.7119-0.32861.7033-0.28150.67561.9108-0.38870.330.02230.6613-0.15670.1266-0.62710.2303-0.00051.001-0.12010.22231.06750.04541.1853319.9845137.424323.9728
220.09250.17810.03370.39430.24020.48010.0709-0.12290.24430.2592-0.1731-0.2374-0.25060.051601.228-0.3487-0.11521.23860.0041.0638345.7644133.906856.0877
230.31110.0614-0.170.13550.22870.20340.64870.41330.1214-0.9274-0.2009-0.3691-0.7943-0.2053-0.00031.3750.015-0.06971.1656-0.14281.1461327.4896160.791439.6041
24-0.1052-0.06630.18770.8434-0.57370.24910.3830.7688-0.51560.0741-0.7640.1832-0.79530.4264-0.0011.0441-0.3231-0.12721.25340.0671.558376.9042133.753238.0325
25-0.0615-0.0008-0.0007-0.05210.0079-0.0554-0.1824-0.4227-0.33230.3338-0.4816-0.20950.1638-0.30580.00011.02150.0088-0.28591.66470.34471.8435395.9626106.624736.82
26-0.0994-0.1383-0.01841.9665-0.99450.2211-1.36720.9411-0.11150.0870.65510.3836-0.419-0.0932-0.00021.1785-0.1253-0.13581.760.45551.792417.6658105.349852.1929
27-0.1756-1.0185-0.5492-0.3295-1.69170.82810.07030.13370.09450.5027-0.310.2858-0.25850.40160.00011.2292-0.1219-0.07851.36010.10811.6375359.4269115.88069.1013
280.643-1.4699-0.33131.92950.28610.1810.29570.0068-0.35530.0956-0.5037-0.3276-0.18870.08460.00021.16170.1434-0.17451.71150.52831.9498394.620789.511727.7957
290.1872-0.02890.33030.0637-0.35881.69950.3408-1.3429-0.00490.0764-0.6350.4893-0.49032.50880.00631.1026-0.2519-0.03692.02510.32032.6443412.7621121.700529.4482
300.75830.6803-0.65420.55270.05841.1789-0.41520.0988-1.02380.16040.1148-0.3779-0.48470.67930.00021.4110.3468-0.00331.49390.00721.7719384.785284.56653.4007
312.05380.45230.8210.151.00411.42150.15060.1217-0.2891-0.2534-0.0047-0.1352-0.17830.203100.9365-0.01380.15981.2880.16461.3561371.4633116.442-7.2528
32-0.1328-0.162-0.422-0.63910.2735-0.0031-0.4656-0.07970.07760.31440.1641-0.2195-0.07140.185401.1591-0.1722-0.04341.310.09841.2775356.9175121.145926.4207
330.12810.0909-0.2739-0.016-0.1460.17050.3177-0.4805-0.2173-0.6819-0.19410.52530.41890.07690.00010.999-0.0945-0.12131.68480.30361.785384.7264121.987419.5819
341.2159-0.2747-0.16560.12980.05690.07070.15160.69730.1834-2.2306-0.4135-1.2021-0.3819-0.3694-0.10171.0154-0.3582-0.01271.59680.5162.1844394.541141.010827.0022
350.1584-0.3042-0.1822-0.00130.16560.151-0.1322-0.1861-0.39021.1816-0.0259-0.04170.77420.3927-0.00021.4908-0.2675-0.22451.40550.12961.4366380.467106.890145.2989
360.061-0.3350.15510.1727-0.24710.19430.09810.78910.29121.129-0.11130.0833-0.627-0.32710.00011.6566-0.08110.06591.4793-0.29321.1881318.5877150.247371.2445
37-0.34340.01650.06460.5107-0.49340.2344-0.19710.2275-0.56140.4871-0.1971-0.42780.21430.2748-0.00040.893-0-0.07131.45670.20751.6255377.811188.989955.4299
380.9817-1.27881.00011.0877-0.96780.52940.9828-0.2279-0.0623-0.05540.4297-0.5009-0.0402-0.6418-0.00161.1279-0.1235-0.05341.36010.18841.4488345.4398106.762645.0364
391.3815-0.71350.75140.68850.5032-0.57610.22940.2297-0.2859-0.1374-0.0886-0.2879-0.1380.18230.00011.14020.01840.12840.9152-0.04461.0204333.9718111.3883-3.9853
400.5408-0.2497-0.2822-0.3548-0.65750.250.4910.2517-0.0162-0.3445-0.3610.79330.1539-0.04280.00011.4609-0.01220.04841.2176-0.05861.2062314.2659128.1146-33.1051
41-0.08280.136-0.19480.0103-0.10950.06490.3293-0.58990.4844-0.3054-0.3540.2029-0.54480.6123-0.00032.09520.29730.12961.4660.19571.7655309.4103190.6649-27.7049
420.324-1.38990.65490.6713-0.72370.10220.42670.1315-0.155-0.265-0.40.14110.19090.30410.00011.6580.05890.07861.16650.18431.1226310.073164.8497-36.8036
430.7913-2.26770.08170.30740.55312.00670.05140.11180.11620.0621-0.1867-0.3878-0.6505-0.12090.00031.9104-0.13070.23141.33650.19231.3626325.6483173.3247-21.6151
44-0.0476-0.40120.122-0.29890.04150.72880.20910.02690.3703-0.13480.1372-0.4198-0.15760.5722-0.00051.4379-0.09480.15931.32540.0851.3109339.7182152.27151.5853
45-0.9016-0.3206-0.7030.0587-0.2766-1.31420.0381-0.1084-0.0643-0.13310.0728-0.0816-0.1865-0.31140.00031.1778-0.12470.02131.2144-0.01980.9304312.2985132.6546-3.6501
460.317-0.1276-0.27460.31331.4485-0.64870.51410.4237-0.263-0.1992-0.59650.07830.0652-0.07360.00051.47440.14280.18051.31210.22541.218291.8226177.092511.1483
472.0585-0.4023-0.64481.15270.24120.2691-0.3571.2006-0.5059-0.17060.4598-0.4335-0.6162-0.2222-0.00291.1960.04470.24380.8108-0.04071.4353297.9967207.501230.2746
480.03551.06520.0551.4658-0.58120.8424-0.15760.63780.45320.16630.621-0.0898-0.24330.33040.00031.24590.08860.27561.1676-0.07461.3315299.4759198.365241.8491
490.0404-0.3485-0.25790.33440.25880.1103-0.26190.4659-0.16450.8640.2614-0.4259-0.31840.3435-01.95110.2111-0.29971.4765-0.25252.2495309.3759203.205761.9529
501.0154-0.14540.67050.16880.08280.32740.5124-0.65840.1640.01540.018-0.19680.6107-1.1203-0.00022.2030.0914-0.17621.6868-0.24841.5221306.2039188.127481.548
510.93590.5675-0.00840.2255-0.063-0.0952-0.2677-0.61931.108-0.61650.2307-0.1815-0.38480.1993-0.00042.07380.1526-0.06661.5393-0.4271.3466300.2466209.474882.3838
520.1620.06510.34310.7179-0.08510.23621.40180.2646-0.0468-0.2521-0.27120.51840.9615-0.8332-0.00032.5041-0.3249-0.02971.54970.10281.8171293.0574187.3285102.7328
530.6071-0.5839-0.29341.666-0.45650.4026-0.0082-0.4356-0.42660.10660.5731-0.6168-0.4727-0.37550.00011.02330.18240.10340.8021-0.02731.0492298.9194178.015543.7066
540.47250.56850.52770.4160.31870.05790.35330.44090.16050.6116-0.1970.1276-0.0713-0.20840.00071.1578-0.0030.17540.9597-0.08161.0294280.9122155.135127.6578
550.9531-1.34090.33350.418-0.4358-0.1152-0.17030.87480.04930.68110.0772-0.0012-0.67860.34050.00031.24360.07250.04850.84930.05741.1655284.3316151.773116.5847
56-0.7058-0.0108-0.24460.3881.14981.29440.20560.6621-0.32820.4097-0.50690.01420.6068-0.6713-0.00011.16710.04760.39781.63270.09531.5882248.1659188.723337.6529
571.1242-0.2469-0.22930.2768-0.2420.23730.0691-0.01060.26770.627-0.3370.01341.0474-1.072801.47330.1204-0.15371.58350.11631.6585257.1912166.31429.5577
581.31-0.1226-0.76650.78720.38820.37110.164-0.22760.1974-0.0150.17260.5420.13970.0466-0.00031.72080.39260.41941.4780.05761.6882264.3656214.355339.734
591.3676-0.8876-0.78752.413-1.60141.42220.2010.18540.56770.13990.3247-0.4772-0.30610.1006-0.00011.41370.1490.34480.9711-0.15891.5567286.5494222.222832.4324
600.50490.4511-0.72251.9443-0.36610.5990.34560.12560.10920.2508-0.11190.3985-0.3374-0.0120.00011.30020.28870.27581.2027-0.00051.2575276.0433196.859926.3767
610.387-0.11141.0517-1.00020.23472.7377-0.00170.27420.13190.17510.05750.1875-0.4802-0.0258-0.00051.3855-0.23730.04030.78670.03381.2861332.1535169.150211.4614
62-0.03330.1399-0.15180.1988-0.8361.65890.03240.3170.555-0.4961-0.18810.91540.00340.4895-0.00021.5774-0.1605-0.24511.72210.41742.1544375.4149145.33542.4759
630.66660.97691.28670.88311.74672.3779-0.50021.40760.03960.93350.2232-0.5245-0.00040.2908-0.00021.281-0.15370.03062.05180.14041.5611404.2628117.01683.6386
64-0.23640.7184-0.17641.507-0.2046-0.0842-0.3250.3127-0.2092-0.02610.29730.2352-0.5148-0.3281-0.00011.4043-0.12190.13271.20550.05781.0505322.4879166.2595-7.257
Refinement TLS group
IDRefine-IDRefine TLS-IDSelection detailsAuth asym-IDAuth seq-ID
1X-RAY DIFFRACTION1chain BB3 - 228
2X-RAY DIFFRACTION2chain CC2 - 207
3X-RAY DIFFRACTION3chain DD2 - 209
4X-RAY DIFFRACTION4chain EE5 - 161
5X-RAY DIFFRACTION5chain FF1 - 101
6X-RAY DIFFRACTION6chain GG2 - 156
7X-RAY DIFFRACTION7chain HH1 - 138
8X-RAY DIFFRACTION8chain II2 - 128
9X-RAY DIFFRACTION9chain JJ3 - 101
10X-RAY DIFFRACTION10chain KK11 - 125
11X-RAY DIFFRACTION11chain LL5 - 128
12X-RAY DIFFRACTION12chain MM2 - 126
13X-RAY DIFFRACTION13chain NN2 - 61
14X-RAY DIFFRACTION14chain OO2 - 89
15X-RAY DIFFRACTION15chain PP1 - 85
16X-RAY DIFFRACTION16chain QQ2 - 105
17X-RAY DIFFRACTION17chain RR18 - 88
18X-RAY DIFFRACTION18chain SS2 - 84
19X-RAY DIFFRACTION19chain TT4 - 106
20X-RAY DIFFRACTION20chain VV2 - 25
21X-RAY DIFFRACTION21chain A and ( resid 1:25 or resid 916:920 )A1 - 25
22X-RAY DIFFRACTION21chain A and ( resid 1:25 or resid 916:920 )A916 - 920
23X-RAY DIFFRACTION22chain A and ( resid 26:50 or resid 361:372 or resid 390:411 or resid 431:451 or resid 482:518 or resid 533:556 )A26 - 50
24X-RAY DIFFRACTION22chain A and ( resid 26:50 or resid 361:372 or resid 390:411 or resid 431:451 or resid 482:518 or resid 533:556 )A361 - 372
25X-RAY DIFFRACTION22chain A and ( resid 26:50 or resid 361:372 or resid 390:411 or resid 431:451 or resid 482:518 or resid 533:556 )A390 - 411
26X-RAY DIFFRACTION22chain A and ( resid 26:50 or resid 361:372 or resid 390:411 or resid 431:451 or resid 482:518 or resid 533:556 )A431 - 451
27X-RAY DIFFRACTION22chain A and ( resid 26:50 or resid 361:372 or resid 390:411 or resid 431:451 or resid 482:518 or resid 533:556 )A482 - 518
28X-RAY DIFFRACTION22chain A and ( resid 26:50 or resid 361:372 or resid 390:411 or resid 431:451 or resid 482:518 or resid 533:556 )A533 - 556
29X-RAY DIFFRACTION23chain A and ( resid 519:532 )A519 - 532
30X-RAY DIFFRACTION24chain A and ( resid 51:59 or resid 352:360 )A51 - 59
31X-RAY DIFFRACTION24chain A and ( resid 51:59 or resid 352:360 )A352 - 360
32X-RAY DIFFRACTION25chain A and ( resid 60:68 or resid 101:107 )A60 - 68
33X-RAY DIFFRACTION25chain A and ( resid 60:68 or resid 101:107 )A101 - 107
34X-RAY DIFFRACTION26chain A and ( resid 69:99 )A69 - 99
35X-RAY DIFFRACTION27chain A and ( resid 119:133 or resid 229:245 or resid 280:287 or resid 2130 )A119 - 133
36X-RAY DIFFRACTION27chain A and ( resid 119:133 or resid 229:245 or resid 280:287 or resid 2130 )A229 - 245
37X-RAY DIFFRACTION27chain A and ( resid 119:133 or resid 229:245 or resid 280:287 or resid 2130 )A280 - 287
38X-RAY DIFFRACTION27chain A and ( resid 119:133 or resid 229:245 or resid 280:287 or resid 2130 )A2130
39X-RAY DIFFRACTION28chain A and ( resid 134:150 or resid 172:179 or resid 197:228 )A134 - 150
40X-RAY DIFFRACTION28chain A and ( resid 134:150 or resid 172:179 or resid 197:228 )A172 - 179
41X-RAY DIFFRACTION28chain A and ( resid 134:150 or resid 172:179 or resid 197:228 )A197 - 228
42X-RAY DIFFRACTION29chain A and ( resid 151:171 )A151 - 171
43X-RAY DIFFRACTION30chain A and ( resid 180:196 or resid 2191:2202 )A180 - 196
44X-RAY DIFFRACTION30chain A and ( resid 180:196 or resid 2191:2202 )A2191 - 2202
45X-RAY DIFFRACTION31chain A and ( resid 246:279 )A246 - 279
46X-RAY DIFFRACTION32chain A and ( resid 108:118 or resid 288:314 )A108 - 118
47X-RAY DIFFRACTION32chain A and ( resid 108:118 or resid 288:314 )A288 - 314
48X-RAY DIFFRACTION33chain A and ( resid 315:337 )A315 - 337
49X-RAY DIFFRACTION34chain A and ( resid 338:351 )A338 - 351
50X-RAY DIFFRACTION35chain A and ( resid 373:389 )A373 - 389
51X-RAY DIFFRACTION36chain A and ( resid 412:430 )A412 - 430
52X-RAY DIFFRACTION37chain A and ( resid 452:481 )A452 - 481
53X-RAY DIFFRACTION38chain A and ( resid 609:630 )A609 - 630
54X-RAY DIFFRACTION39chain A and ( resid 576:608 or resid 631:651 or resid 754:768 )A576 - 608
55X-RAY DIFFRACTION39chain A and ( resid 576:608 or resid 631:651 or resid 754:768 )A631 - 651
56X-RAY DIFFRACTION39chain A and ( resid 576:608 or resid 631:651 or resid 754:768 )A754 - 768
57X-RAY DIFFRACTION40chain A and ( resid 652:672 or resid 734:753 )A652 - 672
58X-RAY DIFFRACTION40chain A and ( resid 652:672 or resid 734:753 )A734 - 753
59X-RAY DIFFRACTION41chain A and ( resid 686:702 )A686 - 702
60X-RAY DIFFRACTION42chain A and ( resid 673:685 or resid 703:733 )A673 - 685
61X-RAY DIFFRACTION42chain A and ( resid 673:685 or resid 703:733 )A703 - 733
62X-RAY DIFFRACTION43chain A and ( resid 769:810 )A769 - 810
63X-RAY DIFFRACTION44chain A and ( resid 886:915 )A886 - 915
64X-RAY DIFFRACTION45chain A and ( resid 557:575 or resid 811:885 )A557 - 575
65X-RAY DIFFRACTION45chain A and ( resid 557:575 or resid 811:885 )A811 - 885
66X-RAY DIFFRACTION46chain A and ( resid 921:944 or resid 1340:1345 or resid 1384:1396 )A921 - 944
67X-RAY DIFFRACTION46chain A and ( resid 921:944 or resid 1340:1345 or resid 1384:1396 )A1340 - 1345
68X-RAY DIFFRACTION46chain A and ( resid 921:944 or resid 1340:1345 or resid 1384:1396 )A1384 - 1396
69X-RAY DIFFRACTION47chain A and ( resid 945:955 or resid 1222:1236 )A945 - 955
70X-RAY DIFFRACTION47chain A and ( resid 945:955 or resid 1222:1236 )A1222 - 1236
71X-RAY DIFFRACTION48chain A and ( resid 956:983 )A956 - 983
72X-RAY DIFFRACTION49chain A and ( resid 984:990 or resid 1212:1221 )A984 - 990
73X-RAY DIFFRACTION49chain A and ( resid 984:990 or resid 1212:1221 )A1212 - 1221
74X-RAY DIFFRACTION50chain A and ( resid 991:1003 or resid 1037:1045 or resid 3004 )A991 - 1003
75X-RAY DIFFRACTION50chain A and ( resid 991:1003 or resid 1037:1045 or resid 3004 )A1037 - 1045
76X-RAY DIFFRACTION50chain A and ( resid 991:1003 or resid 1037:1045 or resid 3004 )A3004
77X-RAY DIFFRACTION51chain A and ( resid 1004:1023 )A0
78X-RAY DIFFRACTION52chain A and ( resid 1024:1036 or resid 3031:3034 )A1024 - 1036
79X-RAY DIFFRACTION52chain A and ( resid 1024:1036 or resid 3031:3034 )A3031 - 3034
80X-RAY DIFFRACTION53chain A and ( resid 1046:1067 or resid 1188:1211 )A1046 - 1067
81X-RAY DIFFRACTION53chain A and ( resid 1046:1067 or resid 1188:1211 )A1188 - 1211
82X-RAY DIFFRACTION54chain A and ( resid 1068:1073 or resid 1101:1112 )A1068 - 1073
83X-RAY DIFFRACTION54chain A and ( resid 1068:1073 or resid 1101:1112 )A1101 - 1112
84X-RAY DIFFRACTION55chain A and ( resid 1074:1100 )A0
85X-RAY DIFFRACTION56chain A and ( resid 1113:1158 or resid 1180:1187 )A1113 - 1158
86X-RAY DIFFRACTION56chain A and ( resid 1113:1158 or resid 1180:1187 )A1180 - 1187
87X-RAY DIFFRACTION57chain A and ( resid 1159:1179 )A0
88X-RAY DIFFRACTION58chain A and ( resid 1237:1296 )A0
89X-RAY DIFFRACTION59chain A and ( resid 1297:1339 )A0
90X-RAY DIFFRACTION60chain A and ( resid 1346:1383 or resid 3362 )A1346 - 1383
91X-RAY DIFFRACTION60chain A and ( resid 1346:1383 or resid 3362 )A3362
92X-RAY DIFFRACTION61chain A and ( resid 1397:1418 or resid 1482:1505 )A1397 - 1418
93X-RAY DIFFRACTION61chain A and ( resid 1397:1418 or resid 1482:1505 )A1482 - 1505
94X-RAY DIFFRACTION62chain A and ( resid 1419:1432 or resid 1468:1481 )A1419 - 1432
95X-RAY DIFFRACTION62chain A and ( resid 1419:1432 or resid 1468:1481 )A1468 - 1481
96X-RAY DIFFRACTION63chain A and ( resid 1433:1467 )A0
97X-RAY DIFFRACTION64chain A and ( resid 1506:1534 )A0

+
About Yorodumi

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jan 31, 2019. EMDB accession codes are about to change! (news from PDBe EMDB page)

EMDB accession codes are about to change! (news from PDBe EMDB page)

  • The allocation of 4 digits for EMDB accession codes will soon come to an end. Whilst these codes will remain in use, new EMDB accession codes will include an additional digit and will expand incrementally as the available range of codes is exhausted. The current 4-digit format prefixed with “EMD-” (i.e. EMD-XXXX) will advance to a 5-digit format (i.e. EMD-XXXXX), and so on. It is currently estimated that the 4-digit codes will be depleted around Spring 2019, at which point the 5-digit format will come into force.
  • The EM Navigator/Yorodumi systems omit the EMD- prefix.

Related info.:Q: What is EMD? / ID/Accession-code notation in Yorodumi/EM Navigator

External links:EMDB Accession Codes are Changing Soon! / Contact to PDBj

+
Jul 12, 2017. Major update of PDB

Major update of PDB

  • wwPDB released updated PDB data conforming to the new PDBx/mmCIF dictionary.
  • This is a major update changing the version number from 4 to 5, and with Remediation, in which all the entries are updated.
  • In this update, many items about electron microscopy experimental information are reorganized (e.g. em_software).
  • Now, EM Navigator and Yorodumi are based on the updated data.

External links:wwPDB Remediation / Enriched Model Files Conforming to OneDep Data Standards Now Available in the PDB FTP Archive

-
Yorodumi

Thousand views of thousand structures

  • Yorodumi is a browser for structure data from EMDB, PDB, SASBDB, etc.
  • This page is also the successor to EM Navigator detail page, and also detail information page/front-end page for Omokage search.
  • The word "yorodu" (or yorozu) is an old Japanese word meaning "ten thousand". "mi" (miru) is to see.

Related info.:EMDB / PDB / SASBDB / Comparison of 3 databanks / Yorodumi Search / Aug 31, 2016. New EM Navigator & Yorodumi / Yorodumi Papers / Jmol/JSmol / Function and homology information / Changes in new EM Navigator and Yorodumi

Read more