Entry | Database: PDB / ID: 5hp7 |
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Title | Crystal structures of RidA in the apo form |
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Components | Reactive Intermediate Deaminase A, chloroplastic |
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Keywords | HYDROLASE / RidA / enamine/imine / deamination |
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Function / homology | Function and homology information
2-iminobutanoate deaminase activity / 2-iminopropanoate deaminase activity / 2-iminobutanoate/2-iminopropanoate deaminase / organonitrogen compound catabolic process / deaminase activity / branched-chain amino acid biosynthetic process / plant-type vacuole / thylakoid / chloroplast envelope / isoleucine biosynthetic process ...2-iminobutanoate deaminase activity / 2-iminopropanoate deaminase activity / 2-iminobutanoate/2-iminopropanoate deaminase / organonitrogen compound catabolic process / deaminase activity / branched-chain amino acid biosynthetic process / plant-type vacuole / thylakoid / chloroplast envelope / isoleucine biosynthetic process / plastid / chloroplast stroma / chloroplast / response to toxic substance / cytosolSimilarity search - Function RidA, conserved site / Uncharacterized protein family UPF0076 signature. / RidA family / YjgF/YER057c/UK114 family / Endoribonuclease L-PSP / RutC-like / RutC-like superfamily / 60s Ribosomal Protein L30; Chain: A; / 2-Layer Sandwich / Alpha BetaSimilarity search - Domain/homology |
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Biological species | ![](img/tx_plant.gif) Arabidopsis thaliana (thale cress) |
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Method | X-RAY DIFFRACTION / MOLECULAR REPLACEMENT / Resolution: 2 Å |
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Authors | Xie, W. / Liu, X. |
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Funding support | China, 3items Organization | Grant number | Country |
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Science and Technology Program of Guangzhou | 201504010025 | China | Guangdong Innovative Research Team | 2011Y038 | China | Fundamental Research Funds for the Central Universities | 15lgjc15 | China |
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Citation | Journal: Sci Rep / Year: 2016 Title: Crystal structures of RidA, an important enzyme for the prevention of toxic side products Authors: Liu, X. / Zeng, J. / Chen, X. / Xie, W. |
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History | Deposition | Jan 20, 2016 | Deposition site: RCSB / Processing site: PDBJ |
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Revision 1.0 | Oct 12, 2016 | Provider: repository / Type: Initial release |
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Revision 1.1 | Nov 8, 2023 | Group: Data collection / Database references ...Data collection / Database references / Derived calculations / Refinement description Category: chem_comp_atom / chem_comp_bond ...chem_comp_atom / chem_comp_bond / database_2 / pdbx_initial_refinement_model / pdbx_struct_oper_list Item: _database_2.pdbx_DOI / _database_2.pdbx_database_accession / _pdbx_struct_oper_list.symmetry_operation |
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