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- PDB-5fwh: N-terminal FHA domain from EssC a component of the bacterial Type... -
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Open data
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Basic information
Entry | Database: PDB / ID: 5fwh | ||||||
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Title | N-terminal FHA domain from EssC a component of the bacterial Type VII secretion apparatus | ||||||
![]() | ESSC | ||||||
![]() | STRUCTURAL PROTEIN / ATPASE / ESX-1 / FORKHEAD-ASSOCIATED DOMAIN / FTSK/SPOIIIE | ||||||
Function / homology | ![]() | ||||||
Biological species | ![]() | ||||||
Method | ![]() ![]() ![]() | ||||||
![]() | Zoltner, M. / Ng, W.M.A.V. / Money, J.J. / Fyfe, P.K. / Kneuper, H. / Palmer, T. / Hunter, W.N. | ||||||
![]() | ![]() Title: Essc: Domain Structures Inform on the Elusive Translocation Channel in the Type Vii Secretion System. Authors: Zoltner, M. / Ng, W.M.A.V. / Money, J.J. / Fyfe, P.K. / Kneuper, H. / Palmer, T. / Hunter, W.N. | ||||||
History |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 84.3 KB | Display | ![]() |
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PDB format | ![]() | 69.6 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Summary document | ![]() | 424.6 KB | Display | ![]() |
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Full document | ![]() | 426 KB | Display | |
Data in XML | ![]() | 9.1 KB | Display | |
Data in CIF | ![]() | 11.6 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
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Links
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Assembly
Deposited unit | ![]()
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Unit cell |
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Components
#1: Protein | Mass: 22260.387 Da / Num. of mol.: 1 / Fragment: FHA DOMAIN, RESIDUES 1-198 Source method: isolated from a genetically manipulated source Source: (gene. exp.) ![]() Plasmid: PET27B / Production host: ![]() ![]() |
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#2: Water | ChemComp-HOH / |
Sequence details | RESIDUES 1-196 ONLY |
-Experimental details
-Experiment
Experiment | Method: ![]() |
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Sample preparation
Crystal | Density Matthews: 2.12 Å3/Da / Density % sol: 42 % / Description: NONE |
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-Data collection
Diffraction | Mean temperature: 100 K |
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Diffraction source | Source: ![]() ![]() ![]() |
Detector | Type: DECTRIS PILATUS 6M / Detector: PIXEL / Date: Dec 7, 2013 |
Radiation | Protocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M / Scattering type: x-ray |
Radiation wavelength | Wavelength: 0.92 Å / Relative weight: 1 |
Reflection | Resolution: 2.06→29.5 Å / Num. obs: 12092 / % possible obs: 99.1 % / Observed criterion σ(I): 0 / Redundancy: 11.6 % / Rmerge(I) obs: 0.04 / Net I/σ(I): 27.3 |
Reflection shell | Resolution: 2.06→2.17 Å / Redundancy: 7.1 % / Rmerge(I) obs: 0.45 / Mean I/σ(I) obs: 3.6 / % possible all: 94.4 |
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Processing
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Refinement | Method to determine structure: ![]() Starting model: NONE Resolution: 2.06→47.08 Å / Cor.coef. Fo:Fc: 0.95 / Cor.coef. Fo:Fc free: 0.915 / SU B: 18.873 / SU ML: 0.23 / Cross valid method: THROUGHOUT / ESU R: 0.263 / ESU R Free: 0.239 / Stereochemistry target values: MAXIMUM LIKELIHOOD / Details: HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
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Solvent computation | Ion probe radii: 0.8 Å / Shrinkage radii: 0.8 Å / VDW probe radii: 1.2 Å / Solvent model: MASK | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Refinement step | Cycle: LAST / Resolution: 2.06→47.08 Å
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Refine LS restraints |
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