- PDB-5cmy: Crystal structure of yeast Ent5 N-terminal domain-native -
+
Open data
ID or keywords:
Loading...
-
Basic information
Entry
Database: PDB / ID: 5cmy
Title
Crystal structure of yeast Ent5 N-terminal domain-native
Components
Epsin-5
Keywords
PROTEIN TRANSPORT / Vesicular transport / ENT5 / N-terminal domain / inositol phosphate
Function / homology
Function and homology information
clathrin vesicle coat / early endosome to Golgi transport / Golgi to endosome transport / late endosome to vacuole transport via multivesicular body sorting pathway / phosphatidylinositol-3,5-bisphosphate binding / clathrin binding / phospholipid binding / endocytosis / protein transport / endosome membrane ...clathrin vesicle coat / early endosome to Golgi transport / Golgi to endosome transport / late endosome to vacuole transport via multivesicular body sorting pathway / phosphatidylinositol-3,5-bisphosphate binding / clathrin binding / phospholipid binding / endocytosis / protein transport / endosome membrane / endosome / plasma membrane / cytoplasm / cytosol Similarity search - Function
Resolution: 2.09→37.93 Å / Cor.coef. Fo:Fc: 0.958 / Cor.coef. Fo:Fc free: 0.942 / SU B: 4.358 / SU ML: 0.118 / Cross valid method: THROUGHOUT / ESU R: 0.215 / ESU R Free: 0.17 / Stereochemistry target values: MAXIMUM LIKELIHOOD / Details: HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
Rfactor
Num. reflection
% reflection
Selection details
Rfree
0.21336
937
5.1 %
RANDOM
Rwork
0.18048
-
-
-
obs
0.18213
17392
99.79 %
-
Solvent computation
Ion probe radii: 0.8 Å / Shrinkage radii: 0.8 Å / VDW probe radii: 1.2 Å / Solvent model: MASK