Entry Database : PDB / ID : 4tw2 Structure visualization Downloads & linksTitle Crystal Structure of SCARB2 in Neural Condition (pH7.5) ComponentsScavenger receptor class B member 2 Details Keywords PROTEIN BINDING / lipid binding tunnelFunction / homology Function and homology informationFunction Domain/homology Component
regulation of glucosylceramide catabolic process / regulation of carbohydrate catabolic process / regulation of endosome organization / aminophospholipid transport / endosome to plasma membrane protein transport / regulation of lysosome organization / protein targeting to lysosome / phosphatidylcholine binding / cargo receptor activity / scavenger receptor activity ... regulation of glucosylceramide catabolic process / regulation of carbohydrate catabolic process / regulation of endosome organization / aminophospholipid transport / endosome to plasma membrane protein transport / regulation of lysosome organization / protein targeting to lysosome / phosphatidylcholine binding / cargo receptor activity / scavenger receptor activity / cholesterol binding / phosphatidylserine binding / receptor-mediated endocytosis / lysosomal lumen / sensory perception of sound / clathrin-coated endocytic vesicle membrane / positive regulation of neuron projection development / endocytic vesicle membrane / late endosome membrane / transmembrane signaling receptor activity / Cargo recognition for clathrin-mediated endocytosis / Clathrin-mediated endocytosis / protein-folding chaperone binding / virus receptor activity / endosome membrane / Golgi membrane / lysosomal membrane / focal adhesion / endoplasmic reticulum membrane / enzyme binding / protein homodimerization activity / extracellular exosome / membrane / plasma membrane Similarity search - FunctionBiological species Homo sapiens (human)Method X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / molecular replacement / Resolution : 2.889 Å DetailsModel details The protein was expressed in 293T cell Authors Dang, M.H. / Wang, X.X. / Rao, Z.H. Funding support China, 1items Details Hide detailsOrganization Grant number Country Institute of Biophysics, Chinese Academy of Science 2014CB542800 China
CitationJournal : Protein Cell / Year : 2014Title : Molecular mechanism of SCARB2-mediated attachment and uncoating of EV71Authors : Dang, M. / Wang, X. / Wang, Q. / Wang, Y. / Lin, J. / Sun, Y. / Li, X. / Zhang, L. / Lou, Z. / Wang, J. / Rao, Z. History Deposition Jun 29, 2014 Deposition site : RCSB / Processing site : PDBJRevision 1.0 Jul 8, 2015 Provider : repository / Type : Initial releaseRevision 1.1 Jul 15, 2015 Group : Derived calculationsRevision 1.2 Jan 29, 2020 Group : Data collection / Derived calculations ... Data collection / Derived calculations / Refinement description / Source and taxonomy Category : diffrn_source / entity_src_gen ... diffrn_source / entity_src_gen / pdbx_struct_assembly / pdbx_struct_oper_list / software Item : _diffrn_source.pdbx_synchrotron_site / _entity_src_gen.pdbx_alt_source_flag ... _diffrn_source.pdbx_synchrotron_site / _entity_src_gen.pdbx_alt_source_flag / _pdbx_struct_assembly.oligomeric_details / _pdbx_struct_oper_list.symmetry_operation / _software.name Revision 2.0 Jul 29, 2020 Group : Atomic model / Data collection ... Atomic model / Data collection / Derived calculations / Structure summary Category : atom_site / chem_comp ... atom_site / chem_comp / entity / pdbx_branch_scheme / pdbx_chem_comp_identifier / pdbx_entity_branch / pdbx_entity_branch_descriptor / pdbx_entity_branch_link / pdbx_entity_branch_list / pdbx_entity_nonpoly / pdbx_nonpoly_scheme / pdbx_struct_assembly_gen / struct_asym / struct_conn / struct_site / struct_site_gen Item : _atom_site.B_iso_or_equiv / _atom_site.Cartn_x ... _atom_site.B_iso_or_equiv / _atom_site.Cartn_x / _atom_site.Cartn_y / _atom_site.Cartn_z / _atom_site.auth_asym_id / _atom_site.auth_atom_id / _atom_site.auth_comp_id / _atom_site.auth_seq_id / _atom_site.label_asym_id / _atom_site.label_atom_id / _atom_site.label_comp_id / _atom_site.label_entity_id / _atom_site.type_symbol / _chem_comp.name / _chem_comp.type / _pdbx_struct_assembly_gen.asym_id_list / _struct_conn.pdbx_leaving_atom_flag / _struct_conn.pdbx_role / _struct_conn.ptnr1_auth_asym_id / _struct_conn.ptnr1_auth_seq_id / _struct_conn.ptnr1_label_asym_id / _struct_conn.ptnr2_auth_asym_id / _struct_conn.ptnr2_auth_seq_id / _struct_conn.ptnr2_label_asym_id Description : Carbohydrate remediation / Provider : repository / Type : RemediationRevision 3.0 Nov 8, 2023 Group : Atomic model / Data collection ... Atomic model / Data collection / Database references / Derived calculations / Refinement description / Structure summary Category : atom_site / chem_comp ... atom_site / chem_comp / chem_comp_atom / chem_comp_bond / database_2 / pdbx_initial_refinement_model / pdbx_nonpoly_scheme / struct_conn / struct_ncs_dom_lim Item : _atom_site.auth_seq_id / _chem_comp.pdbx_synonyms ... _atom_site.auth_seq_id / _chem_comp.pdbx_synonyms / _database_2.pdbx_DOI / _database_2.pdbx_database_accession / _pdbx_nonpoly_scheme.pdb_seq_num / _struct_conn.ptnr2_auth_seq_id / _struct_ncs_dom_lim.beg_auth_comp_id / _struct_ncs_dom_lim.beg_label_asym_id / _struct_ncs_dom_lim.beg_label_comp_id / _struct_ncs_dom_lim.beg_label_seq_id / _struct_ncs_dom_lim.end_auth_comp_id / _struct_ncs_dom_lim.end_label_asym_id / _struct_ncs_dom_lim.end_label_comp_id / _struct_ncs_dom_lim.end_label_seq_id Revision 3.1 Nov 6, 2024 Group : Structure summary / Category : pdbx_entry_details / pdbx_modification_feature
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