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- PDB-2id4: The 1.9 A structure of Kex2 in complex with an Ac-R-E-R-K-chlorom... -

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Basic information

Entry
Database: PDB / ID: 2id4
TitleThe 1.9 A structure of Kex2 in complex with an Ac-R-E-R-K-chloromethyl ketone inhibitor.
Components
  • Ac-RERK-CMK inhibitor
  • Kexin
KeywordsHYDROLASE/HYDROLASE INHIBITOR / KEX2 / KEXIN / FURIN / PROPROTEIN / PROHORMONE / CONVERTASE / SUBTILISIN LIKE PROTEASE / SERINE PROTEASE / HYDROLASE-HYDROLASE INHIBITOR COMPLEX
Function / homology
Function and homology information


kexin / SMAD2/SMAD3:SMAD4 heterotrimer regulates transcription / peptide pheromone maturation / fungal-type vacuole / peptide hormone processing / trans-Golgi network / protein processing / serine-type endopeptidase activity / extracellular space / membrane / metal ion binding
Similarity search - Function
Kexin/furin catalytic domain / P domain / Proprotein convertase P-domain / P/Homo B domain profile. / Peptidase S8/S53 domain / Peptidase S8, subtilisin, His-active site / Serine proteases, subtilase family, histidine active site. / Serine proteases, subtilase family, aspartic acid active site. / Peptidase S8, subtilisin, Asp-active site / Serine proteases, subtilase family, serine active site. ...Kexin/furin catalytic domain / P domain / Proprotein convertase P-domain / P/Homo B domain profile. / Peptidase S8/S53 domain / Peptidase S8, subtilisin, His-active site / Serine proteases, subtilase family, histidine active site. / Serine proteases, subtilase family, aspartic acid active site. / Peptidase S8, subtilisin, Asp-active site / Serine proteases, subtilase family, serine active site. / Peptidase S8, subtilisin, Ser-active site / Serine proteases, subtilase domain profile. / Galactose-binding domain-like / Peptidase S8, subtilisin-related / Peptidase S8/S53 domain superfamily / Subtilase family / Peptidase S8/S53 domain / Galactose-binding-like domain superfamily / Jelly Rolls / Sandwich / Rossmann fold / 3-Layer(aba) Sandwich / Mainly Beta / Alpha Beta
Similarity search - Domain/homology
N~2~-acetyl-N~5~-[amino(iminio)methyl]-L-ornithyl-L-alpha-glutamyl-N-[(1S)-5-amino-1-(chloroacetyl)pentyl]-N~5~- [amino(iminio)methyl]-L-ornithinamide / MALONIC ACID / Kexin
Similarity search - Component
Biological speciesSaccharomyces cerevisiae (brewer's yeast)
MethodX-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 1.9 Å
AuthorsWheatley, J.L. / Holyoak, T.
CitationJournal: Proc.Natl.Acad.Sci.Usa / Year: 2007
Title: Differential P1 arginine and lysine recognition in the prototypical proprotein convertase Kex2.
Authors: Wheatley, J.L. / Holyoak, T.
History
DepositionSep 14, 2006Deposition site: RCSB / Processing site: RCSB
Revision 1.0May 1, 2007Provider: repository / Type: Initial release
Revision 1.1May 1, 2008Group: Version format compliance
Revision 1.2Jul 13, 2011Group: Advisory / Atomic model ...Advisory / Atomic model / Database references / Derived calculations / Non-polymer description / Structure summary / Version format compliance
Revision 1.3Dec 12, 2012Group: Other
Revision 1.4Apr 29, 2015Group: Non-polymer description
Revision 1.5Oct 18, 2017Group: Refinement description / Category: software
Item: _software.classification / _software.contact_author ..._software.classification / _software.contact_author / _software.contact_author_email / _software.date / _software.language / _software.location / _software.name / _software.type / _software.version
Revision 2.0Jul 29, 2020Group: Advisory / Atomic model ...Advisory / Atomic model / Data collection / Database references / Derived calculations / Non-polymer description / Structure summary
Category: atom_site / chem_comp ...atom_site / chem_comp / database_PDB_caveat / entity / pdbx_branch_scheme / pdbx_chem_comp_identifier / pdbx_entity_branch / pdbx_entity_branch_descriptor / pdbx_entity_branch_link / pdbx_entity_branch_list / pdbx_entity_nonpoly / pdbx_nonpoly_scheme / pdbx_struct_assembly_gen / pdbx_struct_conn_angle / pdbx_struct_special_symmetry / pdbx_validate_chiral / pdbx_validate_close_contact / struct_asym / struct_conn / struct_ref_seq_dif / struct_site / struct_site_gen
Item: _atom_site.B_iso_or_equiv / _atom_site.Cartn_x ..._atom_site.B_iso_or_equiv / _atom_site.Cartn_x / _atom_site.Cartn_y / _atom_site.Cartn_z / _atom_site.auth_asym_id / _atom_site.auth_atom_id / _atom_site.auth_comp_id / _atom_site.auth_seq_id / _atom_site.label_asym_id / _atom_site.label_atom_id / _atom_site.label_comp_id / _atom_site.label_entity_id / _atom_site.occupancy / _atom_site.type_symbol / _chem_comp.formula / _chem_comp.formula_weight / _chem_comp.id / _chem_comp.mon_nstd_flag / _chem_comp.name / _chem_comp.type / _pdbx_entity_nonpoly.comp_id / _pdbx_entity_nonpoly.entity_id / _pdbx_entity_nonpoly.name / _pdbx_struct_assembly_gen.asym_id_list / _pdbx_struct_conn_angle.ptnr1_auth_comp_id / _pdbx_struct_conn_angle.ptnr1_auth_seq_id / _pdbx_struct_conn_angle.ptnr1_label_asym_id / _pdbx_struct_conn_angle.ptnr1_label_atom_id / _pdbx_struct_conn_angle.ptnr1_label_comp_id / _pdbx_struct_conn_angle.ptnr1_label_seq_id / _pdbx_struct_conn_angle.ptnr2_auth_seq_id / _pdbx_struct_conn_angle.ptnr2_label_asym_id / _pdbx_struct_conn_angle.ptnr3_auth_comp_id / _pdbx_struct_conn_angle.ptnr3_auth_seq_id / _pdbx_struct_conn_angle.ptnr3_label_asym_id / _pdbx_struct_conn_angle.ptnr3_label_atom_id / _pdbx_struct_conn_angle.ptnr3_label_comp_id / _pdbx_struct_conn_angle.ptnr3_label_seq_id / _pdbx_struct_conn_angle.value / _pdbx_validate_close_contact.auth_atom_id_2 / _pdbx_validate_close_contact.auth_comp_id_2 / _struct_conn.conn_type_id / _struct_conn.id / _struct_conn.pdbx_dist_value / _struct_conn.pdbx_leaving_atom_flag / _struct_conn.pdbx_role / _struct_conn.ptnr1_auth_asym_id / _struct_conn.ptnr1_auth_comp_id / _struct_conn.ptnr1_auth_seq_id / _struct_conn.ptnr1_label_asym_id / _struct_conn.ptnr1_label_atom_id / _struct_conn.ptnr1_label_comp_id / _struct_conn.ptnr1_label_seq_id / _struct_conn.ptnr2_auth_asym_id / _struct_conn.ptnr2_auth_comp_id / _struct_conn.ptnr2_auth_seq_id / _struct_conn.ptnr2_label_asym_id / _struct_conn.ptnr2_label_atom_id / _struct_conn.ptnr2_label_comp_id / _struct_conn.ptnr2_label_seq_id / _struct_ref_seq_dif.details
Description: Carbohydrate remediation / Provider: repository / Type: Remediation
Revision 2.1Aug 30, 2023Group: Data collection / Database references ...Data collection / Database references / Refinement description / Structure summary
Category: chem_comp / chem_comp_atom ...chem_comp / chem_comp_atom / chem_comp_bond / database_2 / pdbx_initial_refinement_model
Item: _chem_comp.pdbx_synonyms / _database_2.pdbx_DOI / _database_2.pdbx_database_accession
Revision 2.2Nov 15, 2023Group: Data collection / Category: chem_comp_atom / chem_comp_bond / Item: _chem_comp_atom.atom_id / _chem_comp_bond.atom_id_2

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

Downloads & links

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Assembly

Deposited unit
A: Kexin
B: Kexin
C: Ac-RERK-CMK inhibitor
D: Ac-RERK-CMK inhibitor
hetero molecules


Theoretical massNumber of molelcules
Total (without water)113,26415
Polymers111,6624
Non-polymers1,60211
Water12,809711
1
A: Kexin
C: Ac-RERK-CMK inhibitor
hetero molecules


Theoretical massNumber of molelcules
Total (without water)56,6848
Polymers55,8312
Non-polymers8536
Water362
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area2530 Å2
ΔGint-22 kcal/mol
Surface area17740 Å2
MethodPISA
2
B: Kexin
D: Ac-RERK-CMK inhibitor
hetero molecules


Theoretical massNumber of molelcules
Total (without water)56,5807
Polymers55,8312
Non-polymers7495
Water362
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area2340 Å2
ΔGint-21 kcal/mol
Surface area17860 Å2
MethodPISA
Unit cell
Length a, b, c (Å)112.851, 112.851, 370.165
Angle α, β, γ (deg.)90.00, 90.00, 120.00
Int Tables number179
Space group name H-MP6522
Components on special symmetry positions
IDModelComponents
11B-1008-

HOH

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Components

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Protein / Protein/peptide , 2 types, 4 molecules ABCD

#1: Protein Kexin / KEX2 protease / Proteinase YSCF


Mass: 55180.754 Da / Num. of mol.: 2 / Fragment: secreted soluble kex2 / Mutation: Kex2-delta-613
Source method: isolated from a genetically manipulated source
Source: (gene. exp.) Saccharomyces cerevisiae (brewer's yeast)
Gene: KEX2 / Production host: Saccharomyces cerevisiae (brewer's yeast) / References: UniProt: P13134, kexin
#2: Protein/peptide Ac-RERK-CMK inhibitor


Type: Peptide-like / Class: Inhibitor / Mass: 650.215 Da / Num. of mol.: 2 / Source method: obtained synthetically / Details: Chemically synthesized.
References: N~2~-acetyl-N~5~-[amino(iminio)methyl]-L-ornithyl-L-alpha-glutamyl-N-[(1S)-5-amino-1-(chloroacetyl)pentyl]-N~5~- [amino(iminio)methyl]-L-ornithinamide

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Sugars , 2 types, 4 molecules

#3: Polysaccharide 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose


Type: oligosaccharide / Mass: 424.401 Da / Num. of mol.: 2
Source method: isolated from a genetically manipulated source
DescriptorTypeProgram
DGlcpNAca1-4DGlcpNAcb1-Glycam Condensed SequenceGMML 1.0
WURCS=2.0/2,2,1/[a2122h-1b_1-5_2*NCC/3=O][a2122h-1a_1-5_2*NCC/3=O]/1-2/a4-b1WURCSPDB2Glycan 1.1.0
[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}}}LINUCSPDB-CARE
#4: Sugar ChemComp-NAG / 2-acetamido-2-deoxy-beta-D-glucopyranose / N-acetyl-beta-D-glucosamine / 2-acetamido-2-deoxy-beta-D-glucose / 2-acetamido-2-deoxy-D-glucose / 2-acetamido-2-deoxy-glucose / N-ACETYL-D-GLUCOSAMINE


Type: D-saccharide, beta linking / Mass: 221.208 Da / Num. of mol.: 2
Source method: isolated from a genetically manipulated source
Formula: C8H15NO6
IdentifierTypeProgram
DGlcpNAcbCONDENSED IUPAC CARBOHYDRATE SYMBOLGMML 1.0
N-acetyl-b-D-glucopyranosamineCOMMON NAMEGMML 1.0
b-D-GlcpNAcIUPAC CARBOHYDRATE SYMBOLPDB-CARE 1.0
GlcNAcSNFG CARBOHYDRATE SYMBOLGMML 1.0

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Non-polymers , 4 types, 718 molecules

#5: Chemical
ChemComp-CA / CALCIUM ION


Mass: 40.078 Da / Num. of mol.: 4 / Source method: obtained synthetically / Formula: Ca
#6: Chemical ChemComp-NA / SODIUM ION


Mass: 22.990 Da / Num. of mol.: 2 / Source method: obtained synthetically / Formula: Na
#7: Chemical ChemComp-MLA / MALONIC ACID / DICARBOXYLIC ACID C3 / PROPANEDIOLIC ACID / METHANEDICARBOXYLIC ACID


Mass: 104.061 Da / Num. of mol.: 1 / Source method: obtained synthetically / Formula: C3H4O4
#8: Water ChemComp-HOH / water


Mass: 18.015 Da / Num. of mol.: 711 / Source method: isolated from a natural source / Formula: H2O

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Details

Compound detailsTHE UNBOUND FORM OF THE INHIBITOR (CHAINS C,D) IS ACE-ARG-GLU-ARG-LYS-CHLOROMETHYLKETONE. UPON ...THE UNBOUND FORM OF THE INHIBITOR (CHAINS C,D) IS ACE-ARG-GLU-ARG-LYS-CHLOROMETHYLKETONE. UPON REACTION WITH PROTEIN IT FORMS TWO COVALENT BONDS: 1) A COVALENT BOND TO OG SER 385 FORMING A HEMIKETAL LYK AND 2) A COVALENT BOND TO NE2 OF HIS 213

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Experimental details

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Experiment

ExperimentMethod: X-RAY DIFFRACTION / Number of used crystals: 1

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Sample preparation

CrystalDensity Matthews: 3.06 Å3/Da / Density % sol: 59.75 %
Crystal growTemperature: 298 K / Method: vapor diffusion, hanging drop / pH: 7.4
Details: 2.4 M Ammonium Sulfate, pH 7.4, VAPOR DIFFUSION, HANGING DROP, temperature 298K

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Data collection

DiffractionMean temperature: 100 K
Diffraction sourceSource: SYNCHROTRON / Site: APS / Beamline: 14-BM-C / Wavelength: 0.9 Å
DetectorType: ADSC QUANTUM 315 / Detector: CCD / Date: Jun 28, 2006
Details: Bent conical Si-mirror (Rh coated) Bent Ge(111) monochromator
RadiationProtocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M / Scattering type: x-ray
Radiation wavelengthWavelength: 0.9 Å / Relative weight: 1
ReflectionRedundancy: 14.2 % / Av σ(I) over netI: 15.1 / Number: 1517697 / Rmerge(I) obs: 0.061 / Χ2: 1.06 / D res high: 1.9 Å / D res low: 50 Å / Num. obs: 107215 / % possible obs: 96.7
Diffraction reflection shell
Highest resolution (Å)Lowest resolution (Å)% possible obs (%)IDRmerge(I) obsChi squaredRedundancy
4.095098.510.0461.05919.2
3.254.0910010.0521.0620.7
2.843.2510010.0651.02120.9
2.582.8410010.1041.05619.4
2.392.5810010.1431.0516.5
2.252.3910010.1971.10314.4
2.142.2510010.2781.15512
2.052.1410010.3151.0337.5
1.972.0597.310.330.9794
1.91.9770.710.3540.9562.6
ReflectionResolution: 1.9→50 Å / Num. obs: 107215 / % possible obs: 96.7 % / Redundancy: 14.2 % / Rmerge(I) obs: 0.061 / Net I/σ(I): 15.1
Reflection shell
Resolution (Å)Redundancy (%)Rmerge(I) obsDiffraction-ID% possible all
1.9-1.972.60.354170.7
1.97-2.0540.33197.3
2.05-2.147.50.3151100
2.14-2.25120.2781100
2.25-2.3914.40.1971100
2.39-2.5816.50.1431100
2.58-2.8419.40.1041100
2.84-3.2520.90.0651100
3.25-4.0920.70.0521100
4.09-5019.20.046198.5

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Processing

Software
NameVersionClassificationNB
DENZOdata reduction
SCALEPACKdata scaling
REFMAC5.2.0019refinement
PDB_EXTRACT2data extraction
ADSCQUANTUMdata collection
HKL-2000data reduction
RefinementMethod to determine structure: MOLECULAR REPLACEMENT
Starting model: 1R64
Resolution: 1.9→40.79 Å / Cor.coef. Fo:Fc: 0.968 / Cor.coef. Fo:Fc free: 0.957 / SU B: 6.08 / SU ML: 0.093 / TLS residual ADP flag: LIKELY RESIDUAL / Cross valid method: THROUGHOUT / ESU R: 0.122 / ESU R Free: 0.116 / Stereochemistry target values: MAXIMUM LIKELIHOOD / Details: HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
RfactorNum. reflection% reflectionSelection details
Rfree0.20604 5345 5 %RANDOM
Rwork0.17709 ---
obs0.17853 101674 96.62 %-
Solvent computationIon probe radii: 0.8 Å / Shrinkage radii: 0.8 Å / VDW probe radii: 1.4 Å / Solvent model: MASK
Displacement parametersBiso mean: 30.635 Å2
Baniso -1Baniso -2Baniso -3
1--0.34 Å2-0.17 Å20 Å2
2---0.34 Å20 Å2
3---0.51 Å2
Refine analyzeLuzzati coordinate error obs: 0.3 Å
Refinement stepCycle: LAST / Resolution: 1.9→40.79 Å
ProteinNucleic acidLigandSolventTotal
Num. atoms7479 0 97 711 8287
Refine LS restraints
Refine-IDTypeDev idealDev ideal targetNumber
X-RAY DIFFRACTIONr_bond_refined_d0.0080.0217978
X-RAY DIFFRACTIONr_bond_other_d
X-RAY DIFFRACTIONr_angle_refined_deg1.1391.95410880
X-RAY DIFFRACTIONr_angle_other_deg
X-RAY DIFFRACTIONr_dihedral_angle_1_deg7.4535.0391033
X-RAY DIFFRACTIONr_dihedral_angle_2_deg33.62724.565379
X-RAY DIFFRACTIONr_dihedral_angle_3_deg14.322151293
X-RAY DIFFRACTIONr_dihedral_angle_4_deg16.8251546
X-RAY DIFFRACTIONr_chiral_restr0.0820.21194
X-RAY DIFFRACTIONr_gen_planes_refined0.0040.026136
X-RAY DIFFRACTIONr_gen_planes_other
X-RAY DIFFRACTIONr_nbd_refined0.1950.23894
X-RAY DIFFRACTIONr_nbd_other
X-RAY DIFFRACTIONr_nbtor_refined0.3040.25383
X-RAY DIFFRACTIONr_nbtor_other
X-RAY DIFFRACTIONr_xyhbond_nbd_refined0.1160.2760
X-RAY DIFFRACTIONr_xyhbond_nbd_other
X-RAY DIFFRACTIONr_metal_ion_refined0.0840.223
X-RAY DIFFRACTIONr_metal_ion_other
X-RAY DIFFRACTIONr_symmetry_vdw_refined0.1720.264
X-RAY DIFFRACTIONr_symmetry_vdw_other
X-RAY DIFFRACTIONr_symmetry_hbond_refined0.1070.221
X-RAY DIFFRACTIONr_symmetry_hbond_other
X-RAY DIFFRACTIONr_symmetry_metal_ion_refined
X-RAY DIFFRACTIONr_symmetry_metal_ion_other
X-RAY DIFFRACTIONr_mcbond_it0.3251.54884
X-RAY DIFFRACTIONr_mcbond_other
X-RAY DIFFRACTIONr_mcangle_it0.59427882
X-RAY DIFFRACTIONr_scbond_it1.20433252
X-RAY DIFFRACTIONr_scangle_it2.0774.52968
X-RAY DIFFRACTIONr_rigid_bond_restr
X-RAY DIFFRACTIONr_sphericity_free
X-RAY DIFFRACTIONr_sphericity_bonded
LS refinement shellResolution: 1.9→1.947 Å / Total num. of bins used: 20
RfactorNum. reflection% reflection
Rfree0.341 277 -
Rwork0.312 4983 -
obs--65.16 %
Refinement TLS params.

Method: refined / Refine-ID: X-RAY DIFFRACTION

IDL112)L122)L132)L222)L232)L332)S11 (Å °)S12 (Å °)S13 (Å °)S21 (Å °)S22 (Å °)S23 (Å °)S31 (Å °)S32 (Å °)S33 (Å °)T112)T122)T132)T222)T232)T332)Origin x (Å)Origin y (Å)Origin z (Å)
114.1315-2.64814.509821.5486-18.410931.93630.4015-3.28990.42681.0723-0.16381.1116-0.89090.055-0.23770.340.18690.08650.7804-0.16140.3906-27.8332-21.502131.6809
24.2199-3.1667-0.3492.7069-1.862913.68870.1576-0.04150.00420.11350.00990.8464-0.1552-0.8585-0.16750.06410.15820.03940.14690.00530.2622-27.2958-28.721424.282
30.89060.6676-0.41113.9162-3.26962.75730.0988-0.18690.30090.24950.0250.4499-0.2927-0.2057-0.12390.1270.16160.02960.0037-0.00940.115-16.9433-28.439930.8633
41.5621-0.0222-0.70411.46450.55822.03-0.04580.1950.2903-0.23120.05680.2743-0.3154-0.3922-0.01110.19850.1616-0.07880.03890.07870.182-18.0824-24.87929.3672
514.8449.7958-3.84267.1036-3.60034.5869-0.66460.4906-0.6665-0.73690.3026-0.24970.12660.15450.3620.30570.0359-0.01730.0970.03570.0689-1.6188-31.6771-3.2504
61.6259-0.1855-0.07882.633-0.34691.7802-0.01150.21540.2388-0.32340.0640.1621-0.3654-0.0677-0.05250.24790.0547-0.0184-0.02420.0690.1156-5.1537-23.23756.0074
712.63910.4063-4.12574.8363-0.56963.6099-0.51551.2119-0.7577-0.78860.25760.09940.4128-0.35570.25790.115-0.02570.03690.0466-0.06160.07465.1226-44.176110.9493
81.76940.6631-0.56734.5604-0.89312.2834-0.05420.2770.2725-0.34020.06960.0982-0.48880.1265-0.01540.2265-0.008-0.0154-0.0440.05770.0761.913-22.66278.4374
93.46135.8072-4.237827.4443-4.92885.4572-0.2048-0.0048-0.0291-0.2509-0.19960.530.1968-0.23410.40440.03510.04670.0183-0.0019-0.00570.10132.771-42.759619.0055
101.05860.1734-0.22740.4059-0.07441.3338-0.01570.0050.0862-0.09160.0180.0805-0.2454-0.0463-0.00220.06560.07280.0169-0.06660.00320.0645-5.6325-33.794920.988
1111.0895-0.63680.97362.14080.08353.9253-0.07960.7177-0.0299-0.08260.04420.319-0.061-0.22980.03550.08170.1206-0.030.04190.01310.0753-18.2257-36.642416.854
121.4627-0.02050.39481.42030.34660.5406-0.0512-0.09910.394-0.04320.11520.013-0.4381-0.092-0.0640.22460.0810.0072-0.0523-0.01080.1756-3.5319-17.826922.0284
136.57335.6697-0.365911.2366-0.81613.30260.2025-0.5389-0.04290.1892-0.2541-0.1845-0.29580.18570.05160.09490.03560.00590.0781-0.04660.0125.4718-29.607834.4022
142.8679-0.8390.43921.48960.21551.9409-0.0413-0.17480.25160.1175-0.00680.1481-0.5284-0.08670.04810.14510.03740.0477-0.0494-0.02320.0925-2.5715-24.569929.1623
153.2726-1.501-0.39072.64810.10250.58110.0272-0.08970.5481-0.07170.1-0.169-0.35230.2277-0.12720.234-0.0545-0.00350.0306-0.03180.031216.2171-22.081418.6039
163.3457-2.36230.650525.0377-0.6171.03670.0773-0.23070.45510.9978-0.0619-1.034-0.39360.5549-0.01540.1985-0.10950.05180.2133-0.05780.054326.6849-26.171223.134
171.6875-0.2761-0.39142.23950.67471.0752-0.0154-0.10180.07220.06050.0131-0.0129-0.14040.16490.00230.0578-0.00740.02520.02080.00120.004815.6335-34.086220.1472
1811.52658.11391.217311.3011.40333.5693-0.18760.1584-0.2328-0.53320.27630.44540.00060.3183-0.0886-0.00140.04840.04770.0040.00140.055214.617-46.22510.7655
191.7945-0.0808-0.11241.77590.57970.946-0.056-0.0980.0720.05090.0584-0.0799-0.18940.2901-0.00240.0905-0.03660.04220.04250.00530.016919.4753-32.853719.5161
2015.0148-18.65635.510524.2161-2.264522.3097-0.0410.75111.4016-1.1685-1.1991-1.1754-2.46570.82011.24010.5119-0.28220.12840.09470.06570.583616.1099-5.229615.6047
215.92431.57741.63927.03022.131519.1809-0.31960.5226-0.0967-0.69640.1562-0.722-0.73431.14360.16340.32250.0040.16930.4502-0.13640.187-0.6306-68.5207-25.1963
223.8634-2.87450.226312.85782.03753.06590.12650.8827-0.0315-0.9861-0.2294-0.385-0.25610.06320.10280.14870.07060.0820.334-0.02350.0342-9.5409-62.4796-20.0237
232.0381-0.6224-0.30831.35740.60232.0724-0.03040.1973-0.2075-0.34210.0913-0.2270.28420.3456-0.0610.09260.11350.06210.1482-0.08640.1053-4.0131-72.4641-9.9188
242.98570.3076-2.65743.6125-1.2417.3837-0.17670.2856-0.6659-0.33430.0849-0.11481.2080.09940.09180.36370.0605-0.01120.0688-0.12260.2758-12.6259-86.8843-8.2042
253.2168-0.75563.24355.1948-4.702910.25770.20250.4469-0.6048-0.37560.29340.60340.8414-0.5159-0.49590.3775-0.0751-0.01120.2369-0.12110.3085-22.5214-86.1217-7.9251
262.7236-0.7752-0.58333.83251.3223.206-0.10060.32170.0155-0.44470.1693-0.240.48950.1422-0.06870.21240.07590.05440.1375-0.09560.1082-10.2815-76.8305-15.271
271.14010.7285-0.51281.8977-0.9714.08650.09190.1717-0.36770.0380.0117-0.02970.6163-0.1462-0.10360.15930.057-0.00990.0545-0.06540.1838-15.0518-81.2901-1.351
282.275-0.95140.51571.7721-0.13282.29940.018-0.0001-0.3107-0.0475-0.0560.01410.428-0.06680.0380.04020.02370.01210.0226-0.00590.1038-16.2937-72.91846.1337
290.8103-0.13210.25910.42370.21663.2486-0.00950.1582-0.0879-0.11-0.0573-0.0294-0.0354-0.11010.0668-0.04960.0537-0.00940.0685-0.0230.0305-18.96-61.1590.3266
301.397-0.75390.09861.4915-0.07381.8599-0.0320.3115-0.2093-0.2116-0.00750.07850.2194-0.02740.03940.07650.04510.0460.1283-0.0570.0602-14.3313-68.7797-11.513
310.47730.3485-0.661.86970.71963.3929-0.0626-0.0052-0.156-0.13380.1291-0.20250.16430.5681-0.0665-0.06610.11010.03650.1494-0.01590.1321-0.5407-66.03424.9727
3217.2595-9.1384-2.93967.46160.90060.66460.48560.53050.8014-0.581-0.3187-0.4453-0.33220.0764-0.16680.14530.06090.04590.09290.02020.1167-11.4978-48.9319-5.3849
332.2196-0.2696-0.74191.57630.40963.0148-0.01010.12410.0606-0.1779-0.1364-0.1376-0.20130.04710.1465-0.02240.04540.00430.04820.03140.0224-11.2597-51.6831.6712
343.05820.1026-1.41340.73281.43078.87370.0430.0254-0.0524-0.02690.1082-0.2608-0.15650.9223-0.1512-0.070.11980.03150.1229-0.01350.15861.7659-63.04856.943
357.129-2.23663.17513.8144-3.22085.0459-0.3083-0.19840.49320.31510.0675-0.1365-0.5157-0.43030.24090.00440.0905-0.00230.0912-0.07530.0592-27.0161-51.88424.6357
360.8328-0.9653-1.43812.75910.57193.214-0.0712-0.0893-0.02910.2104-0.0827-0.2321-0.20890.44980.1539-0.04850.0231-0.03080.08790.03810.085-5.9249-55.295124.4518
372.27310.47250.60240.82390.22022.0179-0.01330.1280.0388-0.05720.00190.0632-0.211-0.33370.0114-0.06140.0905-0.01140.0794-0.00490.0285-26.0855-54.54113.9923
386.01-4.02125.2143.1778-4.90268.6266-0.01770.2312-0.3729-0.01710.17540.22660.2685-0.7278-0.1576-0.05120.0332-0.01180.2292-0.02230.0748-35.369-62.004614.6503
391.58430.04550.09910.93990.03281.5964-0.0077-0.04420.119-0.0129-0.03970.0547-0.0878-0.17040.0473-0.06510.0712-0.01070.03120.00620.0324-21.7065-54.778818.4565
401.79090.97-0.633125.1984-1.44628.8392-0.087-0.6632-0.58031.2096-0.32380.11271.15721.48990.4108-0.01310.11970.01660.34870.1010.2343.7103-65.809724.07
Refinement TLS group
IDRefine-IDRefine TLS-IDAuth asym-IDLabel asym-IDAuth seq-IDLabel seq-ID
1X-RAY DIFFRACTION1AA122 - 1329 - 19
2X-RAY DIFFRACTION2AA133 - 14120 - 28
3X-RAY DIFFRACTION3AA142 - 15629 - 43
4X-RAY DIFFRACTION4AA157 - 24644 - 133
5X-RAY DIFFRACTION5AA247 - 256134 - 143
6X-RAY DIFFRACTION6AA257 - 276144 - 163
7X-RAY DIFFRACTION7AA277 - 283164 - 170
8X-RAY DIFFRACTION8AA284 - 316171 - 203
9X-RAY DIFFRACTION9AA317 - 322204 - 209
10X-RAY DIFFRACTION10AA323 - 375210 - 262
11X-RAY DIFFRACTION11AA376 - 386263 - 273
12X-RAY DIFFRACTION12AA387 - 422274 - 309
13X-RAY DIFFRACTION13AA423 - 437310 - 324
14X-RAY DIFFRACTION14AA438 - 454325 - 341
15X-RAY DIFFRACTION15AA455 - 481342 - 368
16X-RAY DIFFRACTION16AA482 - 500369 - 387
17X-RAY DIFFRACTION17AA501 - 542388 - 429
18X-RAY DIFFRACTION18AA543 - 549430 - 436
19X-RAY DIFFRACTION19AA550 - 594437 - 481
20X-RAY DIFFRACTION20AA595 - 600482 - 487
21X-RAY DIFFRACTION21BB122 - 1369 - 23
22X-RAY DIFFRACTION22BB137 - 15224 - 39
23X-RAY DIFFRACTION23BB153 - 17940 - 66
24X-RAY DIFFRACTION24BB180 - 19967 - 86
25X-RAY DIFFRACTION25BB200 - 21287 - 99
26X-RAY DIFFRACTION26BB214 - 228101 - 115
27X-RAY DIFFRACTION27BB229 - 263116 - 150
28X-RAY DIFFRACTION28BB264 - 319151 - 206
29X-RAY DIFFRACTION29BB320 - 355207 - 242
30X-RAY DIFFRACTION30BB356 - 399243 - 286
31X-RAY DIFFRACTION31BB400 - 417287 - 304
32X-RAY DIFFRACTION32BB418 - 426305 - 313
33X-RAY DIFFRACTION33BB427 - 448314 - 335
34X-RAY DIFFRACTION34BB449 - 468336 - 355
35X-RAY DIFFRACTION35BB469 - 487356 - 374
36X-RAY DIFFRACTION36BB488 - 507375 - 394
37X-RAY DIFFRACTION37BB508 - 542395 - 429
38X-RAY DIFFRACTION38BB543 - 550430 - 437
39X-RAY DIFFRACTION39BB551 - 594438 - 481
40X-RAY DIFFRACTION40BB595 - 600482 - 487

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