登録情報 | データベース: PDB / ID: 4ph0 |
---|
タイトル | capsid protein from bovine leukemia virus |
---|
要素 | BLV capsid |
---|
キーワード | VIRAL PROTEIN / retroviral capsid / all alpha |
---|
機能・相同性 | 機能・相同性情報
DNA integration / viral genome integration into host DNA / establishment of integrated proviral latency / RNA-directed DNA polymerase activity / RNA-DNA hybrid ribonuclease activity / viral nucleocapsid / DNA recombination / aspartic-type endopeptidase activity / symbiont entry into host cell / structural molecule activity ...DNA integration / viral genome integration into host DNA / establishment of integrated proviral latency / RNA-directed DNA polymerase activity / RNA-DNA hybrid ribonuclease activity / viral nucleocapsid / DNA recombination / aspartic-type endopeptidase activity / symbiont entry into host cell / structural molecule activity / proteolysis / DNA binding / zinc ion binding類似検索 - 分子機能 Delta-retroviral matrix protein / Major core protein p19 / Retrovirus capsid C-terminal domain / Human Immunodeficiency Virus Type 1 Capsid Protein / Human Immunodeficiency Virus Type 1 Capsid Protein / Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A / gag protein p24 N-terminal domain / Integrase DNA binding domain / Integrase, C-terminal, retroviral / Integrase DNA binding domain profile. ...Delta-retroviral matrix protein / Major core protein p19 / Retrovirus capsid C-terminal domain / Human Immunodeficiency Virus Type 1 Capsid Protein / Human Immunodeficiency Virus Type 1 Capsid Protein / Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A / gag protein p24 N-terminal domain / Integrase DNA binding domain / Integrase, C-terminal, retroviral / Integrase DNA binding domain profile. / RNase H / Integrase core domain / Integrase, catalytic core / Integrase catalytic domain profile. / Retroviral nucleocapsid Gag protein p24, C-terminal domain / Gag protein p24 C-terminal domain / Ribonuclease H domain / RNase H type-1 domain profile. / Reverse transcriptase (RNA-dependent DNA polymerase) / Reverse transcriptase domain / Reverse transcriptase (RT) catalytic domain profile. / Retropepsins / Retroviral aspartyl protease / Aspartyl protease, retroviral-type family profile. / Peptidase A2A, retrovirus, catalytic / Retrovirus capsid, C-terminal / Retroviral matrix protein / Retrovirus capsid, N-terminal / zinc finger / Zinc knuckle / Zinc finger, CCHC-type superfamily / Zinc finger, CCHC-type / Zinc finger CCHC-type profile. / Ribonuclease H superfamily / Aspartic peptidase domain superfamily / Ribonuclease H-like superfamily / Reverse transcriptase/Diguanylate cyclase domain / DNA/RNA polymerase superfamily / Orthogonal Bundle / Mainly Alpha類似検索 - ドメイン・相同性 |
---|
生物種 | Bovine leukemia virus (ウシ白血病ウイルス) |
---|
手法 | X線回折 / シンクロトロン / 分子置換 / 解像度: 2.7497 Å |
---|
Model details | mature form |
---|
データ登録者 | Trajtenberg, F. / Obal, G. / Pritsch, O. / Buschiazzo, A. |
---|
資金援助 | フランス, ウルグアイ, 3件 組織 | 認可番号 | 国 |
---|
Centre National de la Recherche Scientifique (CNRS) | Laboratoire International Associe LIA 316 | フランス | Mercosur Structural Biology Center (CeBEM) | | ウルグアイ | Mercosur/FOCEM | COF 03/11 | ウルグアイ |
|
---|
引用 | ジャーナル: Science / 年: 2015 タイトル: STRUCTURAL VIROLOGY. Conformational plasticity of a native retroviral capsid revealed by x-ray crystallography. 著者: Obal, G. / Trajtenberg, F. / Carrion, F. / Tome, L. / Larrieux, N. / Zhang, X. / Pritsch, O. / Buschiazzo, A. |
---|
履歴 | 登録 | 2014年5月3日 | 登録サイト: RCSB / 処理サイト: RCSB |
---|
改定 1.0 | 2015年6月10日 | Provider: repository / タイプ: Initial release |
---|
改定 1.1 | 2015年6月17日 | Group: Database references |
---|
改定 1.2 | 2015年7月15日 | Group: Database references |
---|
改定 1.3 | 2017年11月22日 | Group: Database references / Derived calculations ...Database references / Derived calculations / Other / Refinement description / Source and taxonomy / Structure summary カテゴリ: citation / entity_src_gen ...citation / entity_src_gen / pdbx_database_status / pdbx_struct_assembly / pdbx_struct_assembly_gen / pdbx_struct_assembly_prop / pdbx_struct_oper_list / software / struct_keywords Item: _citation.journal_id_CSD / _entity_src_gen.pdbx_alt_source_flag ..._citation.journal_id_CSD / _entity_src_gen.pdbx_alt_source_flag / _pdbx_database_status.pdb_format_compatible / _pdbx_struct_assembly.oligomeric_details / _pdbx_struct_assembly_gen.asym_id_list / _pdbx_struct_assembly_prop.type / _pdbx_struct_assembly_prop.value / _pdbx_struct_oper_list.symmetry_operation / _software.classification / _struct_keywords.text |
---|
改定 1.4 | 2020年1月8日 | Group: Author supporting evidence / カテゴリ: pdbx_audit_support / Item: _pdbx_audit_support.funding_organization |
---|
改定 1.5 | 2023年12月27日 | Group: Data collection / Database references / Refinement description カテゴリ: chem_comp_atom / chem_comp_bond ...chem_comp_atom / chem_comp_bond / database_2 / diffrn_radiation_wavelength / refine_hist Item: _database_2.pdbx_DOI / _database_2.pdbx_database_accession ..._database_2.pdbx_DOI / _database_2.pdbx_database_accession / _refine_hist.d_res_high / _refine_hist.pdbx_number_atoms_nucleic_acid / _refine_hist.pdbx_number_atoms_protein |
---|
|
---|