- PDB-4od6: Structure of Smr domain of MutS2 from Deinococcus radiodurans, Mn... -
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Basic information
Entry
Database: PDB / ID: 4od6
Title
Structure of Smr domain of MutS2 from Deinococcus radiodurans, Mn2+ soaked
Components
Endonuclease MutS2
Keywords
HYDROLASE / nuclease / Mn2+
Function / homology
Function and homology information
mismatched DNA binding / negative regulation of DNA recombination / ATP-dependent DNA damage sensor activity / mismatch repair / double-stranded DNA binding / endonuclease activity / Hydrolases; Acting on ester bonds / ATP hydrolysis activity / ATP binding Similarity search - Function
Ribosomal Protein S8; Chain: A, domain 1 - #110 / MutS2 and Smr-associated SH3 domain / MutS2 and Smr-associated SH3 domain / Endonuclease MutS2 / Smr domain superfamily / Smr domain / Small MutS-related domain / Smr domain / Smr domain profile. / DNA mismatch repair MutS family ...Ribosomal Protein S8; Chain: A, domain 1 - #110 / MutS2 and Smr-associated SH3 domain / MutS2 and Smr-associated SH3 domain / Endonuclease MutS2 / Smr domain superfamily / Smr domain / Small MutS-related domain / Smr domain / Smr domain profile. / DNA mismatch repair MutS family / DNA mismatch repair protein MutS, C-terminal / DNA mismatch repair protein MutS, core / DNA mismatch repair protein MutS, core domain superfamily / MutS domain V / DNA mismatch repair proteins mutS family signature. / DNA-binding domain of DNA mismatch repair MUTS family / ATPase domain of DNA mismatch repair MUTS family / Ribosomal Protein S8; Chain: A, domain 1 / P-loop containing nucleoside triphosphate hydrolase / 2-Layer Sandwich / Alpha Beta Similarity search - Domain/homology
Mass: 18.015 Da / Num. of mol.: 119 / Source method: isolated from a natural source / Formula: H2O
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Experimental details
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Experiment
Experiment
Method: X-RAY DIFFRACTION / Number of used crystals: 1
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Sample preparation
Crystal
Density Matthews: 1.81 Å3/Da / Density % sol: 32.11 %
Crystal grow
Temperature: 297 K Method: crystal formed spontaneously in protein solution stored at 4 degree pH: 8.8 Details: 30mM NaCl and 20mM Tris-HCl, soaked in 5mM MnCl2 before x-ray data collection, pH 8.8, crystal formed spontaneously in protein solution stored at 4 degree, temperature 297K
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