Entry | Database: PDB / ID: 4mtk |
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Title | Crystal structure of PA0091 VgrG1, the central spike of the Type VI Secretion System |
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Components | VgrG1 |
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Keywords | TOXIN / Beta-barrel / OB-fold / Beta-helix / Type VI secretion system central spike / Secreted outside of the cell |
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Function / homology | Function and homology information
type VI protein secretion system complex / protein secretion by the type VI secretion system / extracellular regionSimilarity search - Function Light-harvesting Protein - #110 / Pnp Oxidase; Chain A - #50 / Gp5 N-terminal domain / Baseplate protein-like domains / Light-harvesting Protein / Type VI secretion system, RhsGE-associated Vgr family subset / Phage tail baseplate hub (GPD) / Phage tail protein beta-alpha-beta fold / Type VI secretion system, RhsGE-associated Vgr protein / Gp5/Type VI secretion system Vgr protein, OB-fold domain ...Light-harvesting Protein - #110 / Pnp Oxidase; Chain A - #50 / Gp5 N-terminal domain / Baseplate protein-like domains / Light-harvesting Protein / Type VI secretion system, RhsGE-associated Vgr family subset / Phage tail baseplate hub (GPD) / Phage tail protein beta-alpha-beta fold / Type VI secretion system, RhsGE-associated Vgr protein / Gp5/Type VI secretion system Vgr protein, OB-fold domain / Type VI secretion system/phage-baseplate injector OB domain / Vgr protein, OB-fold domain superfamily / 3-Layer(bab) Sandwich / Pnp Oxidase; Chain A / Few Secondary Structures / Irregular / OB fold (Dihydrolipoamide Acetyltransferase, E2P) / Roll / Beta Barrel / Mainly Beta / Alpha BetaSimilarity search - Domain/homology |
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Biological species | ![](img/tx_bacteria.gif) Pseudomonas aeruginosa (bacteria) |
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Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 3.322 Å |
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Authors | Sycheva, L.V. / Shneider, M.M. / Leiman, P.G. |
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Citation | Journal: To be Published Title: The conserved architecture of the T6SS central spike complex Authors: Sycheva, L.V. / Shneider, M.M. / Basler, M. / Ho, B.T. / Mekalanos, J.J. / Leiman, P.G. |
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History | Deposition | Sep 19, 2013 | Deposition site: RCSB / Processing site: RCSB |
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Revision 1.0 | Oct 1, 2014 | Provider: repository / Type: Initial release |
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Revision 1.1 | Nov 15, 2017 | Group: Refinement description / Category: software |
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Revision 1.2 | Sep 20, 2023 | Group: Data collection / Database references ...Data collection / Database references / Derived calculations / Refinement description Category: chem_comp_atom / chem_comp_bond ...chem_comp_atom / chem_comp_bond / database_2 / pdbx_initial_refinement_model / struct_ncs_dom_lim / struct_site Item: _database_2.pdbx_DOI / _database_2.pdbx_database_accession ..._database_2.pdbx_DOI / _database_2.pdbx_database_accession / _struct_ncs_dom_lim.beg_auth_comp_id / _struct_ncs_dom_lim.beg_label_asym_id / _struct_ncs_dom_lim.beg_label_comp_id / _struct_ncs_dom_lim.beg_label_seq_id / _struct_ncs_dom_lim.end_auth_comp_id / _struct_ncs_dom_lim.end_label_asym_id / _struct_ncs_dom_lim.end_label_comp_id / _struct_ncs_dom_lim.end_label_seq_id / _struct_site.pdbx_auth_asym_id / _struct_site.pdbx_auth_comp_id / _struct_site.pdbx_auth_seq_id |
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