Entry | Database: PDB / ID: 4mdb |
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Title | Structure of Mos1 transposase catalytic domain and Raltegravir with Mg |
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Components | Mariner Mos1 transposase |
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Keywords | HYDROLASE/HYDROLASE INHIBITOR / RNase-H fold / DDD motif / recombinase / DNA transposition / DNA integration / transposon DNA / HYDROLASE-HYDROLASE INHIBITOR complex |
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Function / homology | Function and homology information
mitotic DNA integrity checkpoint signaling / DNA topoisomerase binding / DNA double-strand break processing / single-stranded DNA endodeoxyribonuclease activity / histone H3K36 methyltransferase activity / histone H3K4 methyltransferase activity / replication fork processing / condensed chromosome / DNA integration / double-strand break repair via nonhomologous end joining ...mitotic DNA integrity checkpoint signaling / DNA topoisomerase binding / DNA double-strand break processing / single-stranded DNA endodeoxyribonuclease activity / histone H3K36 methyltransferase activity / histone H3K4 methyltransferase activity / replication fork processing / condensed chromosome / DNA integration / double-strand break repair via nonhomologous end joining / site of double-strand break / single-stranded DNA binding / double-stranded DNA binding / DNA recombination / Hydrolases; Acting on ester bonds / nucleus / metal ion bindingSimilarity search - Function Transposase, type 1 / Mos1 transposase, HTH domain / Transposase (partial DDE domain) / HTH domain in Mos1 transposase / Ribonuclease H-like superfamily/Ribonuclease H / Nucleotidyltransferase; domain 5 / Ribonuclease H superfamily / Winged helix DNA-binding domain superfamily / Winged helix-like DNA-binding domain superfamily / 2-Layer Sandwich / Alpha BetaSimilarity search - Domain/homology |
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Biological species | ![](img/tx_arthropod.gif) Drosophila mauritiana (fry) |
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Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / molecular replacement / Resolution: 1.7 Å |
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Authors | Richardson, J.M. |
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Citation | Journal: Acs Chem.Biol. / Year: 2014 Title: Structural Basis of Mos1 Transposase Inhibition by the Anti-retroviral Drug Raltegravir. Authors: Wolkowicz, U.M. / Morris, E.R. / Robson, M. / Trubitsyna, M. / Richardson, J.M. |
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History | Deposition | Aug 22, 2013 | Deposition site: RCSB / Processing site: RCSB |
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Revision 1.0 | Jan 22, 2014 | Provider: repository / Type: Initial release |
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Revision 1.1 | Feb 5, 2014 | Group: Database references |
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Revision 1.2 | Apr 2, 2014 | Group: Database references |
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Revision 1.3 | May 7, 2014 | Group: Other |
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Revision 1.4 | Sep 20, 2023 | Group: Data collection / Database references ...Data collection / Database references / Derived calculations / Refinement description / Structure summary Category: chem_comp / chem_comp_atom ...chem_comp / chem_comp_atom / chem_comp_bond / database_2 / entity / pdbx_entity_nonpoly / pdbx_initial_refinement_model / pdbx_struct_conn_angle / struct_conn / struct_ref_seq_dif / struct_site Item: _chem_comp.name / _database_2.pdbx_DOI ..._chem_comp.name / _database_2.pdbx_DOI / _database_2.pdbx_database_accession / _entity.pdbx_description / _pdbx_entity_nonpoly.name / _pdbx_struct_conn_angle.ptnr1_auth_comp_id / _pdbx_struct_conn_angle.ptnr1_auth_seq_id / _pdbx_struct_conn_angle.ptnr1_label_asym_id / _pdbx_struct_conn_angle.ptnr1_label_atom_id / _pdbx_struct_conn_angle.ptnr1_label_comp_id / _pdbx_struct_conn_angle.ptnr1_label_seq_id / _pdbx_struct_conn_angle.ptnr3_auth_comp_id / _pdbx_struct_conn_angle.ptnr3_auth_seq_id / _pdbx_struct_conn_angle.ptnr3_label_asym_id / _pdbx_struct_conn_angle.ptnr3_label_atom_id / _pdbx_struct_conn_angle.ptnr3_label_comp_id / _pdbx_struct_conn_angle.ptnr3_label_seq_id / _pdbx_struct_conn_angle.value / _struct_conn.pdbx_dist_value / _struct_conn.ptnr1_auth_comp_id / _struct_conn.ptnr1_auth_seq_id / _struct_conn.ptnr1_label_asym_id / _struct_conn.ptnr1_label_atom_id / _struct_conn.ptnr1_label_comp_id / _struct_conn.ptnr1_label_seq_id / _struct_conn.ptnr2_auth_comp_id / _struct_conn.ptnr2_auth_seq_id / _struct_conn.ptnr2_label_asym_id / _struct_conn.ptnr2_label_atom_id / _struct_conn.ptnr2_label_comp_id / _struct_ref_seq_dif.details / _struct_site.pdbx_auth_asym_id / _struct_site.pdbx_auth_comp_id / _struct_site.pdbx_auth_seq_id |
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