- PDB-4hk1: Crystal Structure of PCNA from Drosophila melanogaster -
+
Open data
ID or keywords:
Loading...
-
Basic information
Entry
Database: PDB / ID: 4hk1
Title
Crystal Structure of PCNA from Drosophila melanogaster
Components
Proliferating cell nuclear antigen
Keywords
CELL CYCLE / DNA BINDING PROTEIN / THE SLIDING CLAMPS FAMILY (BETA CLAMPS) / DNA BINDING / DNA REPLICATION / DNA REPAIR / CELL CYCLE CONTROL
Function / homology
Function and homology information
Polymerase switching on the C-strand of the telomere / : / Mismatch repair (MMR) directed by MSH2:MSH6 (MutSalpha) / TP53 Regulates Transcription of Genes Involved in G2 Cell Cycle Arrest / Polymerase switching / Removal of the Flap Intermediate / Processive synthesis on the lagging strand / PCNA-Dependent Long Patch Base Excision Repair / Termination of translesion DNA synthesis / Translesion synthesis by REV1 ...Polymerase switching on the C-strand of the telomere / : / Mismatch repair (MMR) directed by MSH2:MSH6 (MutSalpha) / TP53 Regulates Transcription of Genes Involved in G2 Cell Cycle Arrest / Polymerase switching / Removal of the Flap Intermediate / Processive synthesis on the lagging strand / PCNA-Dependent Long Patch Base Excision Repair / Termination of translesion DNA synthesis / Translesion synthesis by REV1 / Translesion synthesis by POLK / Translesion synthesis by POLI / Translesion Synthesis by POLH / Recognition of DNA damage by PCNA-containing replication complex / Dual Incision in GG-NER / Dual incision in TC-NER / eggshell chorion gene amplification / response to methyl methanesulfonate / PCNA complex / DNA polymerase processivity factor activity / leading strand elongation / regulation of DNA replication / mismatch repair / translesion synthesis / response to UV / mitotic spindle organization / nucleotide-excision repair / response to hydrogen peroxide / DNA-templated DNA replication / DNA replication / DNA damage response / chromatin binding / chromatin / DNA binding / nucleus / cytoplasm Similarity search - Function
In the structure databanks used in Yorodumi, some data are registered as the other names, "COVID-19 virus" and "2019-nCoV". Here are the details of the virus and the list of structure data.
Jan 31, 2019. EMDB accession codes are about to change! (news from PDBe EMDB page)
EMDB accession codes are about to change! (news from PDBe EMDB page)
The allocation of 4 digits for EMDB accession codes will soon come to an end. Whilst these codes will remain in use, new EMDB accession codes will include an additional digit and will expand incrementally as the available range of codes is exhausted. The current 4-digit format prefixed with “EMD-” (i.e. EMD-XXXX) will advance to a 5-digit format (i.e. EMD-XXXXX), and so on. It is currently estimated that the 4-digit codes will be depleted around Spring 2019, at which point the 5-digit format will come into force.
The EM Navigator/Yorodumi systems omit the EMD- prefix.
Related info.:Q: What is EMD? / ID/Accession-code notation in Yorodumi/EM Navigator
Yorodumi is a browser for structure data from EMDB, PDB, SASBDB, etc.
This page is also the successor to EM Navigator detail page, and also detail information page/front-end page for Omokage search.
The word "yorodu" (or yorozu) is an old Japanese word meaning "ten thousand". "mi" (miru) is to see.
Related info.:EMDB / PDB / SASBDB / Comparison of 3 databanks / Yorodumi Search / Aug 31, 2016. New EM Navigator & Yorodumi / Yorodumi Papers / Jmol/JSmol / Function and homology information / Changes in new EM Navigator and Yorodumi