Entry Database : PDB / ID : 4gqb Structure visualization Downloads & linksTitle Crystal Structure of the human PRMT5:MEP50 Complex ComponentsHistone H4 peptide Methylosome protein 50 WD repeat-containing protein 77 Protein arginine N-methyltransferase 5 DetailsKeywords TRANSFERASE/PROTEIN BINDING / TIM BARREL / BETA-PROPELLER / METHYLTRANSFERASE / METHYLATION / TRANSFERASE-PROTEIN BINDING complexFunction / homology Function and homology informationFunction Domain/homology Component
positive regulation of adenylate cyclase-inhibiting dopamine receptor signaling pathway / peptidyl-arginine N-methylation / oocyte axis specification / type II protein arginine methyltransferase / protein-arginine omega-N symmetric methyltransferase activity / peptidyl-arginine methylation / Golgi ribbon formation / negative regulation of epithelial cell proliferation involved in prostate gland development / histone H4R3 methyltransferase activity / secretory columnal luminar epithelial cell differentiation involved in prostate glandular acinus development ... positive regulation of adenylate cyclase-inhibiting dopamine receptor signaling pathway / peptidyl-arginine N-methylation / oocyte axis specification / type II protein arginine methyltransferase / protein-arginine omega-N symmetric methyltransferase activity / peptidyl-arginine methylation / Golgi ribbon formation / negative regulation of epithelial cell proliferation involved in prostate gland development / histone H4R3 methyltransferase activity / secretory columnal luminar epithelial cell differentiation involved in prostate glandular acinus development / epithelial cell proliferation involved in prostate gland development / histone arginine N-methyltransferase activity / methylosome / protein-arginine N-methyltransferase activity / positive regulation of mRNA splicing, via spliceosome / methyl-CpG binding / : / endothelial cell activation / histone H3 methyltransferase activity / Cul4B-RING E3 ubiquitin ligase complex / histone methyltransferase complex / regulation of mitotic nuclear division / positive regulation of oligodendrocyte differentiation / histone methyltransferase activity / E-box binding / negative regulation of cell differentiation / ubiquitin-like ligase-substrate adaptor activity / negative regulation of megakaryocyte differentiation / protein localization to CENP-A containing chromatin / spliceosomal snRNP assembly / ribonucleoprotein complex binding / Replacement of protamines by nucleosomes in the male pronucleus / CENP-A containing nucleosome / Packaging Of Telomere Ends / Recognition and association of DNA glycosylase with site containing an affected purine / Cleavage of the damaged purine / Deposition of new CENPA-containing nucleosomes at the centromere / Recognition and association of DNA glycosylase with site containing an affected pyrimidine / Cleavage of the damaged pyrimidine / Inhibition of DNA recombination at telomere / Meiotic synapsis / telomere organization / RNA Polymerase I Promoter Opening / SUMOylation of chromatin organization proteins / Assembly of the ORC complex at the origin of replication / DNA methylation / regulation of ERK1 and ERK2 cascade / Condensation of Prophase Chromosomes / HCMV Late Events / nuclear receptor coactivator activity / Chromatin modifications during the maternal to zygotic transition (MZT) / ERCC6 (CSB) and EHMT2 (G9a) positively regulate rRNA expression / SIRT1 negatively regulates rRNA expression / PRC2 methylates histones and DNA / regulation of signal transduction by p53 class mediator / Defective pyroptosis / liver regeneration / methyltransferase activity / HDACs deacetylate histones / DNA-templated transcription termination / RNA Polymerase I Promoter Escape / Nonhomologous End-Joining (NHEJ) / Transcriptional regulation by small RNAs / Formation of the beta-catenin:TCF transactivating complex / circadian regulation of gene expression / RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function / Activated PKN1 stimulates transcription of AR (androgen receptor) regulated genes KLK2 and KLK3 / NoRC negatively regulates rRNA expression / G2/M DNA damage checkpoint / B-WICH complex positively regulates rRNA expression / HDMs demethylate histones / Regulation of TP53 Activity through Methylation / DNA Damage/Telomere Stress Induced Senescence / PKMTs methylate histone lysines / RMTs methylate histone arginines / Meiotic recombination / Pre-NOTCH Transcription and Translation / nucleosome assembly / Activation of anterior HOX genes in hindbrain development during early embryogenesis / HCMV Early Events / protein polyubiquitination / Transcriptional regulation of granulopoiesis / structural constituent of chromatin / transcription corepressor activity / nucleosome / p53 binding / Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks / RUNX1 regulates transcription of genes involved in differentiation of HSCs / snRNP Assembly / chromatin organization / Processing of DNA double-strand break ends / HATs acetylate histones / ubiquitin-dependent protein catabolic process / Senescence-Associated Secretory Phenotype (SASP) / Oxidative Stress Induced Senescence / Estrogen-dependent gene expression / chromosome, telomeric region / chromatin remodeling / Amyloid fiber formation / protein heterodimerization activity Similarity search - Function Protein arginine N-methyltransferase PRMT5 / PRMT5 arginine-N-methyltransferase / PRMT5, TIM barrel domain / PRMT5, oligomerisation domain / PRMT5 arginine-N-methyltransferase / PRMT5 TIM barrel domain / PRMT5 oligomerisation domain / Hnrnp arginine n-methyltransferase1 / Hnrnp arginine n-methyltransferase1 / Protein arginine N-methyltransferase ... Protein arginine N-methyltransferase PRMT5 / PRMT5 arginine-N-methyltransferase / PRMT5, TIM barrel domain / PRMT5, oligomerisation domain / PRMT5 arginine-N-methyltransferase / PRMT5 TIM barrel domain / PRMT5 oligomerisation domain / Hnrnp arginine n-methyltransferase1 / Hnrnp arginine n-methyltransferase1 / Protein arginine N-methyltransferase / SAM-dependent methyltransferase PRMT-type domain profile. / Divalent-metal-dependent TIM barrel enzymes / YVTN repeat-like/Quinoprotein amine dehydrogenase / 7 Propeller / Methylamine Dehydrogenase; Chain H / Histone H4, conserved site / Histone H4 signature. / Histone H4 / Histone H4 / CENP-T/Histone H4, histone fold / Centromere kinetochore component CENP-T histone fold / TATA box binding protein associated factor / TATA box binding protein associated factor (TAF), histone-like fold domain / Vaccinia Virus protein VP39 / Distorted Sandwich / Histone-fold / WD40 repeat, conserved site / Trp-Asp (WD) repeats signature. / WD domain, G-beta repeat / WD40 repeats / WD40 repeat / Trp-Asp (WD) repeats profile. / Trp-Asp (WD) repeats circular profile. / WD40-repeat-containing domain superfamily / WD40/YVTN repeat-like-containing domain superfamily / S-adenosyl-L-methionine-dependent methyltransferase superfamily / TIM Barrel / Alpha-Beta Barrel / Rossmann fold / 3-Layer(aba) Sandwich / Mainly Beta / Alpha Beta Similarity search - Domain/homologyBiological species Homo sapiens (human)Method X-RAY DIFFRACTION / SYNCHROTRON / SAD / Resolution : 2.06 Å DetailsAuthors Antonysamy, S. / Bonday, Z. / Campbell, R. / Doyle, B. / Druzina, Z. / Gheyi, T. / Han, B. / Jungheim, L.N. / Qian, Y. / Rauch, C. ...Antonysamy, S. / Bonday, Z. / Campbell, R. / Doyle, B. / Druzina, Z. / Gheyi, T. / Han, B. / Jungheim, L.N. / Qian, Y. / Rauch, C. / Russell, M. / Sauder, J.M. / Wasserman, S.R. / Weichert, K. / Willard, F.S. / Zhang, A. / Emtage, S. CitationJournal : Proc.Natl.Acad.Sci.USA / Year : 2012Title : Crystal structure of the human PRMT5:MEP50 complex.Authors: Antonysamy, S. / Bonday, Z. / Campbell, R.M. / Doyle, B. / Druzina, Z. / Gheyi, T. / Han, B. / Jungheim, L.N. / Qian, Y. / Rauch, C. / Russell, M. / Sauder, J.M. / Wasserman, S.R. / ... Authors : Antonysamy, S. / Bonday, Z. / Campbell, R.M. / Doyle, B. / Druzina, Z. / Gheyi, T. / Han, B. / Jungheim, L.N. / Qian, Y. / Rauch, C. / Russell, M. / Sauder, J.M. / Wasserman, S.R. / Weichert, K. / Willard, F.S. / Zhang, A. / Emtage, S. History Deposition Aug 22, 2012 Deposition site : RCSB / Processing site : RCSBRevision 1.0 Oct 17, 2012 Provider : repository / Type : Initial releaseRevision 1.1 Oct 31, 2012 Group : Database referencesRevision 1.2 Nov 14, 2012 Group : Database referencesRevision 1.3 Nov 21, 2018 Group : Data collection / Structure summary / Category : audit_author / Item : _audit_author.identifier_ORCID
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