Protocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M / Scattering type: x-ray
Radiation wavelength
Wavelength: 0.9179 Å / Relative weight: 1
Reflection
Resolution: 2.05→50 Å / Num. obs: 20483 / % possible obs: 99.9 % / Redundancy: 5.4 % / Rmerge(I) obs: 0.13 / Χ2: 1.687 / Net I/σ(I): 6.1
Reflection shell
Resolution (Å)
Redundancy (%)
Rmerge(I) obs
Num. unique all
Χ2
Diffraction-ID
% possible all
2.05-2.12
4.5
0.859
2031
1.51
1
99.5
2.12-2.21
4.9
0.71
2039
1.519
1
99.7
2.21-2.31
5.4
0.624
2030
1.715
1
99.8
2.31-2.43
5.5
0.479
2041
1.525
1
99.9
2.43-2.58
5.5
0.398
2025
1.567
1
100
2.58-2.78
5.5
0.277
2078
1.584
1
100
2.78-3.06
5.6
0.177
2052
1.62
1
100
3.06-3.51
5.6
0.099
2021
1.717
1
100
3.51-4.42
5.5
0.067
2074
1.835
1
100
4.42-50
5.4
0.057
2092
2.21
1
99.8
-
Phasing
Phasing
Method: molecular replacement
-
Processing
Software
Name
Version
Classification
NB
DENZO
datareduction
SCALEPACK
datascaling
PHASER
phasing
REFMAC
5.6.0117
refinement
PDB_EXTRACT
3.006
dataextraction
HKL-2000
datareduction
HKL-2000
datascaling
Refinement
Method to determine structure: MOLECULAR REPLACEMENT Starting model: based on unpublished model of L3MBTL1, itself based on molecular replacement with coordinates from PDB entry 1OYX
Resolution: 2.05→44.761 Å / Cor.coef. Fo:Fc: 0.941 / Cor.coef. Fo:Fc free: 0.917 / WRfactor Rfree: 0.246 / WRfactor Rwork: 0.201 / Occupancy max: 1 / Occupancy min: 0.5 / SU B: 5.902 / SU ML: 0.159 / Cross valid method: THROUGHOUT / σ(F): 0 / ESU R Free: 0.203 / Stereochemistry target values: MAXIMUM LIKELIHOOD Details: HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES: REFINED INDIVIDUALLY. Restraints for refinement of HEPES coordinates were prepared on the PRODRG server using coordinates from PDB ...Details: HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES: REFINED INDIVIDUALLY. Restraints for refinement of HEPES coordinates were prepared on the PRODRG server using coordinates from PDB entry 1cxq. COOT and the MOLPROBITY server were also used. Note by author: density at residue 373 of chain a is inconsistent with valyl type.
Rfactor
Num. reflection
% reflection
Selection details
Rfree
0.267
1028
5.027 %
RANDOM
Rwork
0.222
-
-
-
obs
0.224
20448
99.446 %
-
Solvent computation
Ion probe radii: 0.8 Å / Shrinkage radii: 0.8 Å / VDW probe radii: 1.2 Å / Solvent model: MASK BULK SOLVENT
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