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- PDB-3sej: Structural characterization of a GII.4 2004 norovirus variant (TC... -

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Basic information

Entry
Database: PDB / ID: 3sej
TitleStructural characterization of a GII.4 2004 norovirus variant (TCH05) bound to Secretor Lewis HBGA (LeB)
ComponentsCapsid
KeywordsVIRAL PROTEIN / Protein-Carbohydrate Complex / LeB bound / Receptor binding / Human Blood Group Antigens / Carbohydrate/Sugar binding / Lewis family
Function / homology
Function and homology information


Positive stranded ssRNA viruses / Nucleoplasmin-like/VP (viral coat and capsid proteins) / Positive stranded ssRNA viruses / Calicivirus coat protein C-terminal / Calicivirus coat protein C-terminal / Calicivirus coat protein / Calicivirus coat protein / Elongation Factor Tu (Ef-tu); domain 3 / Picornavirus/Calicivirus coat protein / Viral coat protein subunit ...Positive stranded ssRNA viruses / Nucleoplasmin-like/VP (viral coat and capsid proteins) / Positive stranded ssRNA viruses / Calicivirus coat protein C-terminal / Calicivirus coat protein C-terminal / Calicivirus coat protein / Calicivirus coat protein / Elongation Factor Tu (Ef-tu); domain 3 / Picornavirus/Calicivirus coat protein / Viral coat protein subunit / Beta Barrel / Mainly Beta
Similarity search - Domain/homology
Biological speciesNorovirus Hu/GII.4/2004/NL
MethodX-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 3.041 Å
AuthorsShanker, S. / Choi, J.-M. / Sankaran, B. / Atmar, R.L. / Estes, M.K. / Prasad, B.V.V.
CitationJournal: J.Virol. / Year: 2011
Title: Structural Analysis of Histo-Blood Group Antigen Binding Specificity in a Norovirus GII.4 Epidemic Variant: Implications for Epochal Evolution.
Authors: Shanker, S. / Choi, J.M. / Sankaran, B. / Atmar, R.L. / Estes, M.K. / Prasad, B.V.
History
DepositionJun 10, 2011Deposition site: RCSB / Processing site: RCSB
Revision 1.0Jul 13, 2011Provider: repository / Type: Initial release
Revision 1.1Aug 24, 2011Group: Database references
Revision 2.0Jul 29, 2020Group: Advisory / Atomic model ...Advisory / Atomic model / Data collection / Derived calculations / Structure summary
Category: atom_site / chem_comp ...atom_site / chem_comp / entity / pdbx_branch_scheme / pdbx_chem_comp_identifier / pdbx_entity_branch / pdbx_entity_branch_descriptor / pdbx_entity_branch_link / pdbx_entity_branch_list / pdbx_entity_nonpoly / pdbx_nonpoly_scheme / pdbx_struct_assembly_gen / pdbx_validate_close_contact / struct_asym / struct_conn / struct_site / struct_site_gen
Item: _atom_site.B_iso_or_equiv / _atom_site.Cartn_x ..._atom_site.B_iso_or_equiv / _atom_site.Cartn_x / _atom_site.Cartn_y / _atom_site.Cartn_z / _atom_site.auth_asym_id / _atom_site.auth_atom_id / _atom_site.auth_comp_id / _atom_site.auth_seq_id / _atom_site.label_asym_id / _atom_site.label_atom_id / _atom_site.label_comp_id / _atom_site.label_entity_id / _atom_site.type_symbol / _chem_comp.name / _chem_comp.type / _pdbx_struct_assembly_gen.asym_id_list / _struct_conn.pdbx_dist_value / _struct_conn.pdbx_leaving_atom_flag / _struct_conn.pdbx_value_order / _struct_conn.ptnr1_auth_asym_id / _struct_conn.ptnr1_auth_comp_id / _struct_conn.ptnr1_auth_seq_id / _struct_conn.ptnr1_label_asym_id / _struct_conn.ptnr1_label_atom_id / _struct_conn.ptnr1_label_comp_id / _struct_conn.ptnr2_auth_asym_id / _struct_conn.ptnr2_auth_comp_id / _struct_conn.ptnr2_auth_seq_id / _struct_conn.ptnr2_label_asym_id / _struct_conn.ptnr2_label_atom_id / _struct_conn.ptnr2_label_comp_id
Description: Carbohydrate remediation / Provider: repository / Type: Remediation
Revision 2.1Feb 28, 2024Group: Data collection / Database references ...Data collection / Database references / Refinement description / Structure summary
Category: chem_comp / chem_comp_atom ...chem_comp / chem_comp_atom / chem_comp_bond / database_2 / struct_ncs_dom_lim
Item: _chem_comp.pdbx_synonyms / _database_2.pdbx_DOI ..._chem_comp.pdbx_synonyms / _database_2.pdbx_DOI / _database_2.pdbx_database_accession / _struct_ncs_dom_lim.beg_auth_comp_id / _struct_ncs_dom_lim.beg_label_asym_id / _struct_ncs_dom_lim.beg_label_comp_id / _struct_ncs_dom_lim.beg_label_seq_id / _struct_ncs_dom_lim.end_auth_comp_id / _struct_ncs_dom_lim.end_label_asym_id / _struct_ncs_dom_lim.end_label_comp_id / _struct_ncs_dom_lim.end_label_seq_id

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

Downloads & links

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Assembly

Deposited unit
A: Capsid
B: Capsid
C: Capsid
D: Capsid
E: Capsid
F: Capsid
G: Capsid
H: Capsid
I: Capsid
J: Capsid
hetero molecules


Theoretical massNumber of molelcules
Total (without water)351,31018
Polymers343,31110
Non-polymers7,9998
Water8,233457
1
A: Capsid
C: Capsid
hetero molecules


Theoretical massNumber of molelcules
Total (without water)70,6624
Polymers68,6622
Non-polymers2,0002
Water362
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area6220 Å2
ΔGint30 kcal/mol
Surface area24970 Å2
MethodPISA
2
B: Capsid
E: Capsid
hetero molecules


Theoretical massNumber of molelcules
Total (without water)70,6624
Polymers68,6622
Non-polymers2,0002
Water362
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area6270 Å2
ΔGint29 kcal/mol
Surface area24510 Å2
MethodPISA
3
D: Capsid
F: Capsid
hetero molecules


Theoretical massNumber of molelcules
Total (without water)70,6624
Polymers68,6622
Non-polymers2,0002
Water362
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area6250 Å2
ΔGint28 kcal/mol
Surface area24440 Å2
MethodPISA
4
G: Capsid
J: Capsid
hetero molecules


Theoretical massNumber of molelcules
Total (without water)70,6624
Polymers68,6622
Non-polymers2,0002
Water362
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area6260 Å2
ΔGint29 kcal/mol
Surface area24350 Å2
MethodPISA
5
H: Capsid


Theoretical massNumber of molelcules
Total (without water)34,3311
Polymers34,3311
Non-polymers00
Water181
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
MethodPISA
6
I: Capsid


Theoretical massNumber of molelcules
Total (without water)34,3311
Polymers34,3311
Non-polymers00
Water181
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
MethodPISA
Unit cell
Length a, b, c (Å)242.740, 339.779, 125.021
Angle α, β, γ (deg.)90.00, 90.00, 90.00
Int Tables number20
Space group name H-MC2221
Noncrystallographic symmetry (NCS)NCS domain:
IDEns-IDDetails
11A
21B
31C
12H
22I
13D
23E
14F
24G
34J

NCS domain segments:

Refine code: 4

Dom-IDComponent-IDEns-IDBeg auth comp-IDBeg label comp-IDEnd auth comp-IDEnd label comp-IDAuth asym-IDLabel asym-IDAuth seq-IDLabel seq-ID
111THRTHRGLYGLYAA224 - 2704 - 50
211THRTHRGLYGLYBB224 - 2704 - 50
311THRTHRGLYGLYCC224 - 2704 - 50
121LEULEUALAALAAA272 - 30452 - 84
221LEULEUALAALABB272 - 30452 - 84
321LEULEUALAALACC272 - 30452 - 84
131GLNGLNMETMETAA306 - 53086 - 310
231GLNGLNMETMETBB306 - 53086 - 310
331GLNGLNMETMETCC306 - 53086 - 310
113LYSLYSMETMETDD225 - 5305 - 310
213LYSLYSMETMETEE225 - 5305 - 310
114LYSLYSARGARGFF225 - 4115 - 191
214LYSLYSARGARGGG225 - 4115 - 191
314LYSLYSARGARGJJ225 - 4115 - 191
124SERSERGLYGLYFF413 - 531193 - 311
224SERSERGLYGLYGG413 - 531193 - 311
324SERSERGLYGLYJJ413 - 531193 - 311

NCS ensembles :
ID
1
2
3
4

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Components

#1: Protein
Capsid


Mass: 34331.117 Da / Num. of mol.: 10 / Fragment: Protruding Domain (UNP Residues 221-531)
Source method: isolated from a genetically manipulated source
Source: (gene. exp.) Norovirus Hu/GII.4/2004/NL / Production host: Escherichia coli (E. coli) / References: UniProt: Q5EGK8
#2: Polysaccharide
alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-3)-[alpha-L-fucopyranose-(1-4)]2-acetamido-2- ...alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-3)-[alpha-L-fucopyranose-(1-4)]2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose


Type: oligosaccharide / Mass: 999.912 Da / Num. of mol.: 8
Source method: isolated from a genetically manipulated source
DescriptorTypeProgram
LFucpa1-2DGalpb1-3[LFucpa1-4]DGlcpNAcb1-3DGalpb1-4DGlcpb1-ROHGlycam Condensed SequenceGMML 1.0
WURCS=2.0/4,6,5/[a2122h-1b_1-5][a2112h-1b_1-5][a2122h-1b_1-5_2*NCC/3=O][a1221m-1a_1-5]/1-2-3-2-4-4/a4-b1_b3-c1_c3-d1_c4-f1_d2-e1WURCSPDB2Glycan 1.1.0
[][b-D-Glcp]{[(4+1)][b-D-Galp]{[(3+1)][b-D-GlcpNAc]{[(3+1)][b-D-Galp]{[(2+1)][a-L-Fucp]{}}[(4+1)][a-L-Fucp]{}}}}LINUCSPDB-CARE
#3: Water ChemComp-HOH / water


Mass: 18.015 Da / Num. of mol.: 457 / Source method: isolated from a natural source / Formula: H2O
Sequence detailsTHESE MUTATIONS ARE STRAIN SPECIFIC AS UNP DOES NOT HAVE THE EXACT STRAIN

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Experimental details

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Experiment

ExperimentMethod: X-RAY DIFFRACTION / Number of used crystals: 1

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Sample preparation

CrystalDensity Matthews: 3.75 Å3/Da / Density % sol: 67.24 %
Crystal growTemperature: 295.15 K / Method: vapor diffusion, hanging drop / pH: 8.5
Details: 100mM TRIS, 0.8M potassium sodium tartrate, 0.5% w/v PEG monomethyl ether 5000, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 295.15K

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Data collection

DiffractionMean temperature: 100 K
Diffraction sourceSource: SYNCHROTRON / Site: ALS / Beamline: 5.0.1 / Wavelength: 0.9765 Å
DetectorType: ADSC QUANTUM 315r / Detector: CCD / Date: Jun 20, 2010
RadiationMonochromator: Si(220) Asymmetric cut single crystal / Protocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M / Scattering type: x-ray
Radiation wavelengthWavelength: 0.9765 Å / Relative weight: 1
ReflectionResolution: 3.04→50 Å / Num. obs: 98994 / % possible obs: 75 % / Observed criterion σ(F): 2 / Observed criterion σ(I): 1 / Redundancy: 7.3 % / Rmerge(I) obs: 0.135 / Rsym value: 0.114 / Net I/σ(I): 10.285
Reflection shellResolution: 3.04→3.1 Å / % possible all: 100

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Processing

Software
NameVersionClassification
HKL-2000data collection
PHASERphasing
REFMAC5.5.0102refinement
HKL-2000data reduction
HKL-2000data scaling
RefinementMethod to determine structure: MOLECULAR REPLACEMENT / Resolution: 3.041→49.38 Å / Cor.coef. Fo:Fc: 0.935 / Cor.coef. Fo:Fc free: 0.892 / SU B: 30.904 / SU ML: 0.25 / Cross valid method: THROUGHOUT / ESU R Free: 0.354 / Stereochemistry target values: MAXIMUM LIKELIHOOD / Details: HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
RfactorNum. reflection% reflectionSelection details
Rfree0.22349 4924 5 %RANDOM
Rwork0.16615 ---
obs0.16898 94045 99.74 %-
all-98994 --
Solvent computationIon probe radii: 0.8 Å / Shrinkage radii: 0.8 Å / VDW probe radii: 1.4 Å / Solvent model: MASK
Displacement parametersBiso mean: 39.905 Å2
Baniso -1Baniso -2Baniso -3
1-0.08 Å20 Å20 Å2
2---1.22 Å20 Å2
3---1.14 Å2
Refinement stepCycle: LAST / Resolution: 3.041→49.38 Å
ProteinNucleic acidLigandSolventTotal
Num. atoms23568 0 544 457 24569
Refine LS restraints
Refine-IDTypeDev idealDev ideal targetNumber
X-RAY DIFFRACTIONr_bond_refined_d0.0180.02224834
X-RAY DIFFRACTIONr_bond_other_d
X-RAY DIFFRACTIONr_angle_refined_deg1.8111.98334059
X-RAY DIFFRACTIONr_angle_other_deg
X-RAY DIFFRACTIONr_dihedral_angle_1_deg7.34953034
X-RAY DIFFRACTIONr_dihedral_angle_2_deg36.62624.2551121
X-RAY DIFFRACTIONr_dihedral_angle_3_deg17.982153493
X-RAY DIFFRACTIONr_dihedral_angle_4_deg20.50515120
X-RAY DIFFRACTIONr_chiral_restr0.110.23923
X-RAY DIFFRACTIONr_gen_planes_refined0.0080.02219120
X-RAY DIFFRACTIONr_gen_planes_other
X-RAY DIFFRACTIONr_nbd_refined
X-RAY DIFFRACTIONr_nbd_other
X-RAY DIFFRACTIONr_nbtor_refined
X-RAY DIFFRACTIONr_nbtor_other
X-RAY DIFFRACTIONr_xyhbond_nbd_refined
X-RAY DIFFRACTIONr_xyhbond_nbd_other
X-RAY DIFFRACTIONr_metal_ion_refined
X-RAY DIFFRACTIONr_metal_ion_other
X-RAY DIFFRACTIONr_symmetry_vdw_refined
X-RAY DIFFRACTIONr_symmetry_vdw_other
X-RAY DIFFRACTIONr_symmetry_hbond_refined
X-RAY DIFFRACTIONr_symmetry_hbond_other
X-RAY DIFFRACTIONr_symmetry_metal_ion_refined
X-RAY DIFFRACTIONr_symmetry_metal_ion_other
X-RAY DIFFRACTIONr_mcbond_it0.741.515247
X-RAY DIFFRACTIONr_mcbond_other
X-RAY DIFFRACTIONr_mcangle_it1.418224853
X-RAY DIFFRACTIONr_scbond_it1.82939587
X-RAY DIFFRACTIONr_scangle_it3.2444.59206
X-RAY DIFFRACTIONr_rigid_bond_restr
X-RAY DIFFRACTIONr_sphericity_free
X-RAY DIFFRACTIONr_sphericity_bonded
Refine LS restraints NCS

Refine-ID: X-RAY DIFFRACTION

Ens-IDDom-IDAuth asym-IDNumberTypeRms dev position (Å)Weight position
11A2368MEDIUM POSITIONAL0.270.5
12B2368MEDIUM POSITIONAL0.260.5
13C2368MEDIUM POSITIONAL0.340.5
11A2368MEDIUM THERMAL0.892
12B2368MEDIUM THERMAL0.822
13C2368MEDIUM THERMAL0.992
21H2132MEDIUM POSITIONAL0.250.5
21H2132MEDIUM THERMAL0.92
31D2382MEDIUM POSITIONAL0.220.5
31D2382MEDIUM THERMAL0.842
41F2360MEDIUM POSITIONAL0.240.5
42G2360MEDIUM POSITIONAL0.240.5
43J2360MEDIUM POSITIONAL0.270.5
41F2360MEDIUM THERMAL0.652
42G2360MEDIUM THERMAL0.652
43J2360MEDIUM THERMAL0.732
LS refinement shellResolution: 3.041→3.12 Å / Total num. of bins used: 20
RfactorNum. reflection% reflection
Rfree0.346 326 -
Rwork0.231 6661 -
obs--96.47 %
Refinement TLS params.

Method: refined / Refine-ID: X-RAY DIFFRACTION

IDL112)L122)L132)L222)L232)L332)S11 (Å °)S12 (Å °)S13 (Å °)S21 (Å °)S22 (Å °)S23 (Å °)S31 (Å °)S32 (Å °)S33 (Å °)T112)T122)T132)T222)T232)T332)Origin x (Å)Origin y (Å)Origin z (Å)
10.8258-0.02170.0650.1442-0.0220.0340.0114-0.04830.0607-0.0552-0.03650.05630.05750.00810.0250.1369-0.00050.00630.0530.00840.073393.9016-61.848914.2125
227.75910.110216.821813.854412.939914.89170.1481-2.73730.01010.0643-0.39390.4111-0.1467-1.42220.24570.3990.23630.12230.4680.07170.098582.2973-48.255616.9808
32.225-0.14310.30621.80980.29730.39990.02330.21050.0729-0.1454-0.07850.06820.1172-0.01120.05520.0832-0.0186-0.00360.04820.02520.033482.0246-53.27482.947
40.67410.1740.14790.2820.17550.1158-0.03890.06030.0045-0.06330.00850.0454-0.03770.0260.03040.0492-0.017-0.00110.09720.00980.015100.7243-63.509812.2479
50.95750.56380.03220.3425-0.05190.5053-0.0031-0.0298-0.1149-0.0284-0.027-0.06770.16830.09020.030.06750.01970.01270.0485-0.00860.0651110.3413-73.584621.8401
60.2231-0.04950.1630.74160.09930.1652-0.0275-0.02280.00220.03790.00510.105-0.063-0.03340.02240.12380.01160.0140.0867-0.05290.122144.9161-31.97768.3479
73.64146.221-0.009811.05270.01163.4804-0.60290.01880.4108-1.47390.13010.61890.07920.22280.47290.4646-0.05390.01470.02610.01170.132658.7993-39.29522.0374
80.76740.4742-0.09842.7521.12311.2340.0542-0.0557-0.05570.268-0.0793-0.04190.0578-0.02880.02510.07510.0063-0.07620.0156-0.02220.11752.6692-44.573914.8424
90.9162-0.0337-0.46911.40170.21480.4411-0.0155-0.19180.00910.3251-0.04120.1097-0.07640.04210.05680.17940.0279-0.0270.0581-0.02350.084249.1055-41.362721.191
100.01180.0841-0.03322.0762-0.34260.26610.01690.0274-0.00820.15940.07410.3114-0.143-0.0574-0.09110.10740.02030.03770.0795-0.05270.144438.5885-19.63816.8293
110.4378-0.22510.12730.48470.15360.5872-0.045-0.0206-0.0945-0.05070.0020.1687-0.0146-0.09680.04310.0374-0.0247-0.00070.0691-0.01510.147877.3261-74.305922.8505
120.54650.0797-0.3252.1168-0.68672.2607-0.03650.0957-0.2015-0.1335-0.0915-0.01560.14130.22380.12810.091-0.0074-0.02030.0971-0.05540.111184.3325-80.6138-0.0872
131.7033-0.6337-0.19340.8325-0.34620.32340.06170.189-0.1291-0.10270.02470.18820.0229-0.0665-0.08640.118-0.042-0.03860.1211-0.04690.093374.6872-75.9496-0.6929
140.2384-0.2557-0.12050.32740.11460.7577-0.0308-0.0694-0.16930.02020.05170.2420.084-0.025-0.02090.0794-0.02850.00210.05740.02980.200773.088-74.641623.047
153.3750.3108-0.14320.32350.00381.4739-0.0052-0.1961-0.10960.0510.00120.1557-0.0212-0.14920.0040.03950.00220.04230.1132-0.01050.111269.6829-69.636534.527
160.5077-0.3212-0.67220.31270.34831.0739-0.0852-0.08210.03070.0790.097-0.00170.01730.0974-0.01190.0850.0141-0.01570.1016-0.02860.0455115.4473-45.208761.7896
170.4558-0.59850.1642.47410.92592.2696-0.0722-0.25220.04010.14980.00170.00090.17480.09580.07050.09680.0532-0.00470.3235-0.02530.0057116.5945-45.313974.5615
180.5738-0.24910.23650.14990.23292.8082-0.1819-0.46920.25850.05820.276-0.1363-0.26570.4084-0.09420.14960.0982-0.05560.5179-0.25650.1327121.3477-36.841580.027
190.4601-0.2783-0.17070.45750.31841.1779-0.0602-0.04690.06540.01020.03550.0162-0.09080.03890.02470.0511-0.00170.0080.0594-0.01630.0368118.8643-46.561555.1814
201.2068-0.7378-0.70310.83390.85180.94730.03450.0769-0.0131-0.0524-0.12980.0613-0.1318-0.18110.09520.10530.018-0.02270.1093-0.04340.0207112.1423-50.567740.5643
210.14080.1632-0.14720.6252-0.20250.48340.02770.0455-0.0589-0.0055-0.03040.1268-0.05480.02030.00270.0283-0.0138-0.01340.0818-0.05980.197131.5228-46.07221.1093
220.96831.36523.25581.92724.587410.9933-0.3438-0.01110.1109-0.52950.04720.1464-1.3749-0.09970.29670.32460.18090.08630.22170.01270.47718.888-39.652212.0878
231.95731.24590.29331.3191.01712.12830.0961-0.1048-0.04770.2466-0.12950.12990.0667-0.05310.03340.1498-0.04590.10710.0173-0.02870.125328.7065-48.979518.556
240.60470.2315-0.10410.76340.08850.96220.05870.116-0.0731-0.02670.0410.16870-0.0428-0.09960.0226-0.0028-0.02730.066-0.06210.191933.0845-51.0829-2.0539
250.89550.07490.06283.80950.42530.5633-0.0850.2719-0.2938-0.52980.15010.1423-0.0032-0.0468-0.06510.0882-0.0453-0.00820.1444-0.10850.137938.6481-48.3258-19.0501
261.2443-0.4544-1.2071.66520.08491.3805-0.0090.0915-0.03010.1011-0.0540.1244-0.0473-0.14210.0630.10210.06110.00580.1367-0.09090.099695.5483-36.083365.3254
275.5868-0.7417-0.85311.7278-0.11150.27250.30730.69220.5533-0.1038-0.028-0.0298-0.1296-0.114-0.27920.29310.04140.10080.09020.06390.3365110.8393-17.932456.0055
281.8076-0.4652-1.33010.87020.09541.65260.1317-0.13950.50240.04910.0904-0.0844-0.37520.0532-0.22210.1577-0.003-0.00220.0622-0.09080.2394110.6191-20.637966.3642
291.7048-0.6413-0.50130.42110.48521.0398-0.04090.0778-0.09220.0312-0.10890.1932-0.078-0.26150.14990.10710.06670.0390.1609-0.0720.20590.0782-36.596868.4519
303.2169-0.6794-1.2682.22030.10513.5623-0.1936-0.0701-0.51030.0499-0.21070.33740.0014-0.24530.40430.133-0.00170.11330.1341-0.12450.268284.3151-46.169372.227
312.5381-0.1569-0.12250.23670.50881.1544-0.0471-0.23510.12190.060.00530.00530.04360.01770.04170.1917-0.0249-0.05960.1487-0.09450.096570.417713.566940.4498
321.34131.34420.62212.67972.39042.6335-0.00230.02840.1443-0.15880.212-0.0583-0.19420.2637-0.20970.1287-0.0156-0.01220.1701-0.10660.102288.56961.798726.5145
330.880.49040.30160.77770.56261.58350.0336-0.115-0.00710.14960.0845-0.13740.21380.1865-0.1180.12510.0183-0.06940.1307-0.0830.103485.9262-0.706236.4192
3484.7281-35.973710.784217.68456.676354.16510.42640.35251.9718-0.2373-0.4159-0.89660.60530.3081-0.01050.46310.15780.45490.81760.13780.472695.584815.824536.6477
351.1535-0.36510.33871.36310.50380.4037-0.12-0.26870.26820.1079-0.01130.0622-0.0008-0.10010.13130.2099-0.0375-0.02920.2147-0.16030.145465.951219.161147.1313
360.4732-0.73860.70291.6582-0.45012.2721-0.1030.05640.03120.0973-0.052-0.1789-0.1740.28460.1550.0663-0.03510.04860.1270.10120.2264100.4418-91.066543.1957
371.13581.2023-0.38991.4488-0.35870.15190.1945-0.24550.06940.2835-0.17340.023-0.04640.12-0.02110.1869-0.105-0.03860.20550.04740.186799.9408-77.67763.345
384.3290.2548-0.06684.72142.70284.68460.2012-0.40370.07320.7201-0.1409-0.5777-0.12950.4118-0.06030.2091-0.1258-0.13960.14710.08390.1315102.8538-84.245466.2671
391.0962-0.4685-0.66360.51170.57822.2477-0.0687-0.0537-0.05480.1229-0.0955-0.14540.06340.10660.16420.0407-0.0417-0.04480.07720.10550.195498.6302-94.522746.0414
400.59530.42920.39412.06480.3642.7452-0.1330.0438-0.2512-0.0689-0.0111-0.16950.05830.52370.14410.04920.02810.09560.19510.10480.2092105.1234-100.607233.5018
411.91580.51880.57191.95970.15810.2767-0.0975-0.0144-0.2386-0.03680.074-0.17370.1307-0.16630.02350.445-0.04970.15040.4588-0.07730.469715.597816.749117.8345
422.618-0.66120.73350.98551.22812.6572-0.2178-0.36710.22460.12290.4418-0.25250.08790.5539-0.2240.41860.02840.12440.65930.02810.359729.154713.77539.1749
433.6035-1.3846-1.5080.54750.59060.7734-0.4439-0.785-0.45110.21020.33390.15280.15430.14770.11010.51160.04820.17730.57330.08220.589325.8757.165837.5381
4416.8374-5.32991.21573.5837-1.10610.3725-0.9638-0.5929-0.50411.03010.87520.0621-0.3164-0.31370.08860.52470.06320.06890.63620.00830.400125.47296.569634.8428
450.51030.1908-0.02030.6137-0.52152.6752-0.0745-0.0009-0.0744-0.0226-0.0240.26820.2061-0.28470.09860.3866-0.06150.07340.4763-0.05990.63329.653817.196414.5666
460.13440.19710.04580.89250.80531.00090.0562-0.08280.04040.0231-0.05690.0133-0.00980.00850.00060.1798-0.0331-0.03170.0857-0.06850.081759.4528-0.009826.2444
474.43551.39461.75380.46630.37882.28850.0578-0.63540.03740.0203-0.13270.02030.1078-0.41930.0750.277-0.0298-0.01080.26390.02820.053861.8368-13.329147.6269
480.88580.04480.20570.33980.34981.81660.1214-0.1594-0.23630.13910.0112-0.02260.21690.1483-0.13260.2758-0.0281-0.07040.06530.02850.076768.1194-14.638539.1636
490.61250.09470.44860.35880.0390.35810.0062-0.04780.03490.1168-0.0650.04630.0156-0.05260.05880.1769-0.0153-0.0230.0659-0.06940.100757.2022-1.467522.7512
501.30510.15381.52531.27890.51471.8726-0.06020.04510.0382-0.16480.00660.0087-0.11190.04670.05360.14170.0025-0.02260.0357-0.0380.048255.68655.930611.8324
Refinement TLS group
IDRefine-IDRefine TLS-IDAuth asym-IDAuth seq-ID
1X-RAY DIFFRACTION1A223 - 305
2X-RAY DIFFRACTION2A306 - 315
3X-RAY DIFFRACTION3A316 - 381
4X-RAY DIFFRACTION4A382 - 483
5X-RAY DIFFRACTION5A484 - 531
6X-RAY DIFFRACTION6B224 - 304
7X-RAY DIFFRACTION7B305 - 318
8X-RAY DIFFRACTION8B319 - 365
9X-RAY DIFFRACTION9B366 - 405
10X-RAY DIFFRACTION10B406 - 530
11X-RAY DIFFRACTION11C221 - 285
12X-RAY DIFFRACTION12C286 - 345
13X-RAY DIFFRACTION13C346 - 407
14X-RAY DIFFRACTION14C408 - 483
15X-RAY DIFFRACTION15C484 - 531
16X-RAY DIFFRACTION16D225 - 304
17X-RAY DIFFRACTION17D305 - 339
18X-RAY DIFFRACTION18D340 - 382
19X-RAY DIFFRACTION19D383 - 483
20X-RAY DIFFRACTION20D484 - 531
21X-RAY DIFFRACTION21E222 - 304
22X-RAY DIFFRACTION22E305 - 315
23X-RAY DIFFRACTION23E316 - 376
24X-RAY DIFFRACTION24E377 - 483
25X-RAY DIFFRACTION25E484 - 530
26X-RAY DIFFRACTION26F224 - 286
27X-RAY DIFFRACTION27F287 - 316
28X-RAY DIFFRACTION28F317 - 407
29X-RAY DIFFRACTION29F408 - 503
30X-RAY DIFFRACTION30F504 - 531
31X-RAY DIFFRACTION31G224 - 286
32X-RAY DIFFRACTION32G287 - 316
33X-RAY DIFFRACTION33G317 - 409
34X-RAY DIFFRACTION34G410 - 415
35X-RAY DIFFRACTION35G416 - 531
36X-RAY DIFFRACTION36H221 - 281
37X-RAY DIFFRACTION37H282 - 345
38X-RAY DIFFRACTION38H346 - 407
39X-RAY DIFFRACTION39H408 - 476
40X-RAY DIFFRACTION40H477 - 531
41X-RAY DIFFRACTION41I221 - 280
42X-RAY DIFFRACTION42I281 - 316
43X-RAY DIFFRACTION43I317 - 369
44X-RAY DIFFRACTION44I375 - 404
45X-RAY DIFFRACTION45I405 - 530
46X-RAY DIFFRACTION46J225 - 286
47X-RAY DIFFRACTION47J287 - 316
48X-RAY DIFFRACTION48J317 - 406
49X-RAY DIFFRACTION49J407 - 483
50X-RAY DIFFRACTION50J484 - 531

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