PROTEIN TRANSPORT / BACTERIAL EFFECTOR / SMALL G PROTEIN / SMALL GTP-BINDING PROTEIN / ARF / ADP-RIBOSYLATION FACTOR 6
機能・相同性
機能・相同性情報
erythrocyte apoptotic process / protein localization to cleavage furrow / maintenance of postsynaptic density structure / positive regulation of mitotic cytokinetic process / regulation of dendritic spine development / establishment of epithelial cell polarity / protein localization to endosome / negative regulation of protein localization to cell surface / negative regulation of dendrite development / negative regulation of receptor-mediated endocytosis ...erythrocyte apoptotic process / protein localization to cleavage furrow / maintenance of postsynaptic density structure / positive regulation of mitotic cytokinetic process / regulation of dendritic spine development / establishment of epithelial cell polarity / protein localization to endosome / negative regulation of protein localization to cell surface / negative regulation of dendrite development / negative regulation of receptor-mediated endocytosis / regulation of Rac protein signal transduction / ruffle assembly / positive regulation of keratinocyte migration / positive regulation of focal adhesion disassembly / regulation of filopodium assembly / MET receptor recycling / thioesterase binding / endocytic recycling / filopodium membrane / Flemming body / protein localization to cell surface / TBC/RABGAPs / cortical actin cytoskeleton organization / positive regulation of actin filament polymerization / hepatocyte apoptotic process / cleavage furrow / regulation of presynapse assembly / synaptic vesicle endocytosis / endocytic vesicle / signaling adaptor activity / vesicle-mediated transport / ruffle / small monomeric GTPase / cellular response to nerve growth factor stimulus / G protein activity / liver development / protein localization to plasma membrane / positive regulation of protein secretion / positive regulation of protein localization to plasma membrane / intracellular protein transport / positive regulation of neuron projection development / recycling endosome membrane / GDP binding / presynapse / Clathrin-mediated endocytosis / nervous system development / cell cortex / early endosome membrane / midbody / postsynapse / cell differentiation / cell adhesion / endosome / cell cycle / cell division / cysteine-type endopeptidase activity / focal adhesion / GTPase activity / glutamatergic synapse / GTP binding / Golgi apparatus / extracellular exosome / membrane / plasma membrane / cytosol 類似検索 - 分子機能
EspG protein, N-terminal domain / Cysteine protease, VirA/EspG / Cysteine protease, VirA/EspG, N-terminal / EspG protein / ADP-ribosylation factor 6 / small GTPase Arf family profile. / Sar1p-like members of the Ras-family of small GTPases / Small GTPase superfamily, ARF/SAR type / ADP-ribosylation factor family / ARF-like small GTPases; ARF, ADP-ribosylation factor ...EspG protein, N-terminal domain / Cysteine protease, VirA/EspG / Cysteine protease, VirA/EspG, N-terminal / EspG protein / ADP-ribosylation factor 6 / small GTPase Arf family profile. / Sar1p-like members of the Ras-family of small GTPases / Small GTPase superfamily, ARF/SAR type / ADP-ribosylation factor family / ARF-like small GTPases; ARF, ADP-ribosylation factor / Nuclear Transport Factor 2; Chain: A, / Rab subfamily of small GTPases / Small GTP-binding protein domain / P-loop containing nucleotide triphosphate hydrolases / Roll / Rossmann fold / P-loop containing nucleoside triphosphate hydrolase / 3-Layer(aba) Sandwich / Alpha Beta 類似検索 - ドメイン・相同性
構造決定の手法: 多波長異常分散 / 解像度: 2.5→29.001 Å / Occupancy max: 1 / Occupancy min: 1 / FOM work R set: 0.7427 / SU ML: 0.45 / 交差検証法: THROUGHOUT / σ(F): 0 / 立体化学のターゲット値: ML 詳細: THE HIGHER-THAN-AVERAGE RFREE VALUE IS PROBABLY DUE TO THE RELATIVE DEARTH OF LATTICE CONTACTS FOR THE ARF6 MOLECULE, AS EVIDENCED BY WEAK ELECTRON DENSITY FOR THE PORTIONS OF ARF6 THAT ARE ...詳細: THE HIGHER-THAN-AVERAGE RFREE VALUE IS PROBABLY DUE TO THE RELATIVE DEARTH OF LATTICE CONTACTS FOR THE ARF6 MOLECULE, AS EVIDENCED BY WEAK ELECTRON DENSITY FOR THE PORTIONS OF ARF6 THAT ARE DISTAL TO THE ESPG-BINDING SITE. THE DENSITY FOR THE PORTIONS OF ARF6 THAT ARE PROXIMAL TO ESPG AND THE MG2+-GTP IS STRONG AND WELL CONNECTED
Rfactor
反射数
%反射
Selection details
Rfree
0.3264
1804
5.16 %
RANDOM
Rwork
0.2228
-
-
-
all
0.2278
34977
-
-
obs
0.2278
34977
97.36 %
-
溶媒の処理
減衰半径: 0.95 Å / VDWプローブ半径: 1.2 Å / 溶媒モデル: FLAT BULK SOLVENT MODEL / Bsol: 53.73 Å2 / ksol: 0.316 e/Å3