- PDB-3fyx: The Structure of OmpF porin with a synthetic dibenzo-18-crown-6 a... -
+
データを開く
IDまたはキーワード:
読み込み中...
-
基本情報
登録情報
データベース: PDB / ID: 3fyx
タイトル
The Structure of OmpF porin with a synthetic dibenzo-18-crown-6 as modulator
要素
Outer membrane protein F
キーワード
TRANSPORT PROTEIN / beta-barrel / ion-channel engineering / porin structure / synthetic ion-current modulator / crown ether / Cell membrane / Cell outer membrane / Ion transport / Membrane / Phage recognition / Porin / Transmembrane / Transport
機能・相同性
機能・相同性情報
colicin transmembrane transporter activity / monoatomic ion channel complex / porin activity / pore complex / protein homotrimerization / monoatomic ion transmembrane transport / lipopolysaccharide binding / cell outer membrane / disordered domain specific binding / protein transport ...colicin transmembrane transporter activity / monoatomic ion channel complex / porin activity / pore complex / protein homotrimerization / monoatomic ion transmembrane transport / lipopolysaccharide binding / cell outer membrane / disordered domain specific binding / protein transport / monoatomic ion channel activity / lipid binding / identical protein binding / membrane 類似検索 - 分子機能
Porin, gammaproteobacterial / : / Porin, Gram-negative type, conserved site / General diffusion Gram-negative porins signature. / Porin domain, Gram-negative type / Gram-negative porin / Porin, Gram-negative type / Porin / Porin domain superfamily / Porin ...Porin, gammaproteobacterial / : / Porin, Gram-negative type, conserved site / General diffusion Gram-negative porins signature. / Porin domain, Gram-negative type / Gram-negative porin / Porin, Gram-negative type / Porin / Porin domain superfamily / Porin / Beta Barrel / Mainly Beta 類似検索 - ドメイン・相同性
解像度: 3.4→44.36 Å / Cor.coef. Fo:Fc: 0.83 / Cor.coef. Fo:Fc free: 0.765 / SU B: 37.337 / SU ML: 0.579 / Isotropic thermal model: Isotropic / 交差検証法: THROUGHOUT / ESU R Free: 0.652 / 立体化学のターゲット値: MAXIMUM LIKELIHOOD / 詳細: HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
Rfactor
反射数
%反射
Selection details
Rfree
0.29437
388
5.6 %
RANDOM
Rwork
0.2491
-
-
-
obs
0.25152
6601
98.45 %
-
溶媒の処理
イオンプローブ半径: 0.8 Å / 減衰半径: 0.8 Å / VDWプローブ半径: 1.2 Å / 溶媒モデル: MASK