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Yorodumi- PDB-3fyp: Crystal structure of the quadruple mutant (N23C/C246S/D247E/P249A... -
+Open data
-Basic information
Entry | Database: PDB / ID: 3fyp | ||||||
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Title | Crystal structure of the quadruple mutant (N23C/C246S/D247E/P249A) of 3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8PS) from Neisseria meningitidis | ||||||
Components | 3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase | ||||||
Keywords | TRANSFERASE / MANNO-OCTULOSONATE / SYNTHASE / LIPOPOLYSACCHARIDE / KDOP / KDO8 KDOPS / KDO8PS / TIM BARREL / BIOSYNTHESIS / LYASE / Lipopolysaccharide biosynthesis | ||||||
Function / homology | Function and homology information 3-deoxy-8-phosphooctulonate synthase / 3-deoxy-8-phosphooctulonate synthase activity / keto-3-deoxy-D-manno-octulosonic acid biosynthetic process / cytosol Similarity search - Function | ||||||
Biological species | Neisseria meningitidis serogroup B (bacteria) | ||||||
Method | X-RAY DIFFRACTION / MOLECULAR REPLACEMENT / Resolution: 1.85 Å | ||||||
Authors | Jameson, G.B. / Parker, E.J. / Cochrane, F.P. / Patchett, M.L. | ||||||
Citation | Journal: J.Mol.Biol. / Year: 2009 Title: Reversing evolution: re-establishing obligate metal ion dependence in a metal-independent KDO8P synthase Authors: Cochrane, F.C. / Cookson, T.V. / Jameson, G.B. / Parker, E.J. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 3fyp.cif.gz | 225.1 KB | Display | PDBx/mmCIF format |
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PDB format | pdb3fyp.ent.gz | 179.3 KB | Display | PDB format |
PDBx/mmJSON format | 3fyp.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Summary document | 3fyp_validation.pdf.gz | 493.4 KB | Display | wwPDB validaton report |
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Full document | 3fyp_full_validation.pdf.gz | 517.7 KB | Display | |
Data in XML | 3fyp_validation.xml.gz | 46.1 KB | Display | |
Data in CIF | 3fyp_validation.cif.gz | 65.4 KB | Display | |
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/fy/3fyp ftp://data.pdbj.org/pub/pdb/validation_reports/fy/3fyp | HTTPS FTP |
-Related structure data
Related structure data | 3fyoC 2qkfS S: Starting model for refinement C: citing same article (ref.) |
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Similar structure data |
-Links
-Assembly
Deposited unit |
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Unit cell |
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Noncrystallographic symmetry (NCS) | NCS domain:
NCS domain segments: Ens-ID: 1
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