- PDB-3fp4: Crystal structure of Tom71 complexed with Ssa1 C-terminal fragment -
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基本情報
登録情報
データベース: PDB / ID: 3fp4
タイトル
Crystal structure of Tom71 complexed with Ssa1 C-terminal fragment
要素
Ssa1
TPR repeat-containing protein YHR117W
キーワード
TRANSPORT PROTEIN / Tom71 / Hsp70 / Mitochondria / translocation / Chaperone / Phosphoprotein / TPR repeat
機能・相同性
機能・相同性情報
HSP90 chaperone cycle for steroid hormone receptors (SHR) in the presence of ligand / HSF1-dependent transactivation / Protein methylation / protein aggregate center / Regulation of HSF1-mediated heat shock response / Clathrin-mediated endocytosis / Neutrophil degranulation / mitochondrion targeting sequence binding / protein import into mitochondrial matrix / protein insertion into mitochondrial inner membrane ...HSP90 chaperone cycle for steroid hormone receptors (SHR) in the presence of ligand / HSF1-dependent transactivation / Protein methylation / protein aggregate center / Regulation of HSF1-mediated heat shock response / Clathrin-mediated endocytosis / Neutrophil degranulation / mitochondrion targeting sequence binding / protein import into mitochondrial matrix / protein insertion into mitochondrial inner membrane / misfolded protein binding / protein targeting to mitochondrion / chaperone cofactor-dependent protein refolding / protein transmembrane transporter activity / response to unfolded protein / cellular response to unfolded protein / vesicle-mediated transport / protein folding chaperone / heat shock protein binding / unfolded protein binding / protein refolding / mitochondrial outer membrane / cytoplasmic translation / ATP hydrolysis activity / mitochondrion / ATP binding / nucleus / plasma membrane / cytoplasm / cytosol 類似検索 - 分子機能
Tetratricopeptide repeat / Heat shock hsp70 proteins family signature 2. / Heat shock hsp70 proteins family signature 1. / Heat shock hsp70 proteins family signature 3. / Heat shock protein 70, conserved site / Heat shock protein 70kD, peptide-binding domain superfamily / Tetratricopeptide repeat / Heat shock protein 70 family / Hsp70 protein / Heat shock protein 70kD, C-terminal domain superfamily ...Tetratricopeptide repeat / Heat shock hsp70 proteins family signature 2. / Heat shock hsp70 proteins family signature 1. / Heat shock hsp70 proteins family signature 3. / Heat shock protein 70, conserved site / Heat shock protein 70kD, peptide-binding domain superfamily / Tetratricopeptide repeat / Heat shock protein 70 family / Hsp70 protein / Heat shock protein 70kD, C-terminal domain superfamily / Tetratricopeptide repeat / TPR repeat region circular profile. / TPR repeat profile. / Tetratricopeptide repeats / Tetratricopeptide repeat / ATPase, nucleotide binding domain / Tetratricopeptide-like helical domain superfamily 類似検索 - ドメイン・相同性
Protein TOM71 / Probable heat shock protein ssa1 類似検索 - 構成要素
解像度: 2.14→8 Å / Cor.coef. Fo:Fc: 0.933 / Cor.coef. Fo:Fc free: 0.901 / SU B: 10.296 / SU ML: 0.132 / 交差検証法: THROUGHOUT / σ(F): 2 / ESU R: 0.213 / ESU R Free: 0.199 / 立体化学のターゲット値: MAXIMUM LIKELIHOOD / 詳細: HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
Rfactor
反射数
%反射
Selection details
Rfree
0.26127
2100
5.1 %
RANDOM
Rwork
0.20768
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obs
0.21036
39166
89.36 %
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all
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39116
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溶媒の処理
イオンプローブ半径: 0.8 Å / 減衰半径: 0.8 Å / VDWプローブ半径: 1.2 Å / 溶媒モデル: MASK