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Yorodumi- PDB-3dky: Crystal Structure of the replication initiator protein encoded on... -
+Open data
-Basic information
Entry | Database: PDB / ID: 3dky | ||||||
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Title | Crystal Structure of the replication initiator protein encoded on plasmid pMV158 (RepB), tetragonal form, to 3.6 Ang resolution | ||||||
Components | Replication protein repB | ||||||
Keywords | REPLICATION / Replication initiation / Plasmid replication / Nuclease / Hexamer / Flexible nuclease domains / DNA replication / Plasmid / REPLICATION INITIATOR | ||||||
Function / homology | Function and homology information DNA topoisomerase activity / extrachromosomal circular DNA / DNA replication / DNA binding / identical protein binding Similarity search - Function | ||||||
Biological species | Streptococcus agalactiae (bacteria) | ||||||
Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 3.6 Å | ||||||
Authors | Boer, D.R. / Ruiz-Maso, J.A. / Blanco, A.G. / Vives-Llacer, M. / Uson, I. / Gomis-Ruth, F.X. / Espinosa, M. / Del Solar, G. / Coll, M. | ||||||
Citation | Journal: Embo J. / Year: 2009 Title: Plasmid replication initiator RepB forms a hexamer reminiscent of ring helicases and has mobile nuclease domains Authors: Boer, D.R. / Ruiz-Maso, J.A. / Lopez-Blanco, J.R. / Blanco, A.G. / Vives-Llacer, M. / Chacon, P. / Uson, I. / Gomis-Ruth, F.X. / Espinosa, M. / Llorca, O. / del Solar, G. / Coll, M. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 3dky.cif.gz | 487.8 KB | Display | PDBx/mmCIF format |
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PDB format | pdb3dky.ent.gz | 411.7 KB | Display | PDB format |
PDBx/mmJSON format | 3dky.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/dk/3dky ftp://data.pdbj.org/pub/pdb/validation_reports/dk/3dky | HTTPS FTP |
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-Related structure data
Related structure data | 3dkxSC S: Starting model for refinement C: citing same article (ref.) |
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Similar structure data |
-Links
-Assembly
Deposited unit |
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Unit cell |
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Noncrystallographic symmetry (NCS) | NCS domain:
NCS domain segments:
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